SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27111_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0061002 P negative regulation of dendritic spine morphogenesis
Transcript
Level		FPKM:3.84 TPM:3.23
ORF EntryO_TrvaMG16261_5prime_partial:A_TrvaMG_comp27111_c0_seq1
Sequence
(Nucleotide)
AATGTGAAAAACGTTATAAAGAAATTTGAATCTGAAATTAATGCTCATACTAATAATACA
AGTACCTTTAAAAAACAGTCTGACCAAACTAAAAGTACAATACATATAAAAGAAAAACCC
AAAGTACCTGAGAAGAAATCATCAATAGTTTTAACGAAAAATCTCGTATTAAAAGATGGC
ATTCCAAAGATTAAAACGATTAGACCTAACTCAAATATCAACGCAACAATTAGAAATTTT
GATTCAAAAAGTTCGGACTCCATAAACTTACCAAAAAAGAAAGAACCAATCTATGATAAA
AAGAGATACAAAACGAATTACATACACACAGAAAAGTTACCTTTGAAAGTGGTAGAAATT
ATACCTGAAGACATTGAGACTACCACCTTGGCTAAAGACGAAATAGCCACTCAAGTATCA
AATGAAACCGTAATAAATATCACACACGTAGCAGTTACGACAGAACCGGACACTAAAGAT
CTAGAACCACCAATAATTCCAAACGAATCATTTCTATGGCGCAGAAAAAGCAGCACCCAA
ATATACGCTGATTCTGATTTATCTTCATCTGCTGATGTATCCAGCAGCTTGATTACCATC
ACCACGAATGAAAGTACAATCTCTCTCGATGAAACAACAGAAGAAAAATCTCAACTAAGT
GAGGTGAAGGAATCTCAGATCAACACTAACGTATGTGAAAAGAACATGGACTTCGAAAGC
GATCTAGTTGAAGCGTACAATAAAGAAATTCTAGTTGGATTCACACCCAAACCTAAAAAA
GAACCAGTCGTAGAAGATGATTACGAAGTATTAGAACCCAGAGAAGAGGAAAACGTTGTT
ATAATACCGATTAAGCCAGTCGATATAGCGTCAAAAATGAATTGCCCACTGCCCGAAATC
CCAAAACAGGCTAGTATCGAATCGTCAGATTCTGATGATAAAGACAATATCTATCAGTGT
CTCCTAGAAATGAGATCACATCCTGAAGGTGACGAAAGCAGTCTACACAATTATGAACTC
TGTGATAATGATTTGGAAGAAAGAACGCGAGGAGATGGTGACAGTGATGATGGATATGAA
TACTGCAAATCTCCAATAAAGCCTTACTGTCTAACATCTAGCTCTGGAATCCAAATAGCT
GAAGACTATAAACCGTACTCTAAAGACAACTTCAAAAACTACGCAATAACAAAATCCGTG
AGCGGTACCTCAACAGTCAGCTACGAGAAAATAGGGTGTGATAGAATCTACGAGAAGATT
CCGCCCAGACCTCCAAAATCTAAAGACAGCAGCCCCACTTATAGCAGTCGACATTCTTTC
ATATCCGACTATATTGAAAACGAAAATATTTACGACACCATAAAACACGGTGATGGCAGT
TCCCTGTCTCATTGTTACGAAAGTATACCAAACAGTCCAAGCATGGTAAAGCTTCGGAAT
AATCTTAAGAAGCAACTAGCATCCACTGTTCAAAAGCGGCTATCATTTGACACTGTGTCT
AATATCAGCCAGTCTACGCTATCCAGTGAGCAGAAAACCAATAGCCTGTACGGGCAGAGG
TCTGTGATAAGTTTCAACGGGCAGGAGGTGGCGTTTCAGGTGCCGAGCAGCGAGACGAGT
GTCAGCGATAGAAGCGACGATTGGGTCGACGTGTCGGATGAGGAGAAGAACGATGAACAG
AAGATTATCATTGTCCGCGAGAGAAGCAGAGGCAGAAAGAGTCCGATCAGCTGGTCGCAG
AAAGTGAGACATCAGTGGCAGAATTCCCCTAAGAAAGGTGACAAACAAGAATGCGACAGC
AGTGACTCCTCGGGTCATCTTTACGAGTCTTTGGAGCCTGCGCCGCCAGCACCAAGAGCC
CCTGTTATACCCATAGAAGAAGACTTCGACTCATTCGACAGCGATTCAGATTGCGATGAC
AATGATAAGACACCAACGTATGCGCAAGCCCCGCCATTACCCGCTTCAAGACTGCCAACG
CCACCTAGCGGAGGACAGTACACACTCACCAAGATAGCTAGCGCCGCCCAGCGGACGATG
AAGTCAATCAAACGAAACCTAACAAAACGATATTCAGTTGCAATGGACGGTAAATCACTT
ACGAAGTCATTACAAAACGGCACATACGATACACCTAAAACGAAGAAGAGTCCCATCTAC
TCCAACTACGAGAAACCCGAGATCCAGCACGTTTACAGCAATATGAACTTCAACGACACC
AAACCAGTACTCAATAAGGTCGAAAATCCCGTGAAGACTGACTTTCAAGAAGAACTTAAG
TATGCTGTAGGAGAAAAAAGGCCGAGTAGTGGGGAAATTCCTCCTCCTTTACCGGAAAAA
CCTCCCCCGGAAAGGTCTGTCTCTGATATGAAGAAAGATAGCGGGACTTTGTCAAGAAAA
GCGTATTTTTCCTTCAAATCCAGGTTTAGGAGAGCGACGTCTATGGCTATAGATATAAAC
GACGTTCCTAGTGCTCTGAAGATCACAAATTCGACGTTCTATTTAACTGATTCGATGGAC
GGGGACTCCGGGTTCGGGAACTGCGACGGCGGGCAAGGTAGCAGCAGCGACACACCTCCA
TCACGTCGAGACGGTACGAGATATGAGTCCACTCCCTGCCTGGCTATAGAACGACCCACC
GTCCCGCCGCCCCCGCCGCCAACTGACATTAGCGCTGTCAACGAAGAACTGAAGCGCCTC
CTGCCGTCGTTGTCTCGTAAGGATAAGAGTCCAAGAGCCCGCACATCCTGGTACGCGGAG
TGTGGAGCTGATGCTACTTCCAACACAGCCTCGACTTCGTGGTACGCGGAAGCAGGACTG
TATCAAGCTGGGAACATATCTACGTCATCGGGAGCGTCTTCGGGATCTCATCCGGCGTCG
CCCCTCCCACACTCGCTTTTCACCCACGAACCGCTCTATCAATTCTACAACGCGGCTAAA
GTTGAGTCGATCTACCGAGAGACAGGCGATTCAGACTCGGACGCGTACGAGGCCGGTCAG
AGTACCCGCGAGGGTCCGCCCGTGTCCCCCACAGCGAGGCCCTCAGCCATGGCGCTGGTG
GCGCCGCGCGGGCCCGCCAGGACGCTCTGGTGCGAGGTGCCCGAGGTCGTCAACTCGGCT
GTGCTCAGCTCCCTGGCACCGGCACAGAAGCGTCTTCAAGAGGCTAAATTTGAACTTCTG
ACCTCTGAAGCATCGTATCTGAACTCTCTGAACGTATTGGAGTCTCAATTCGTGGCACAT
CCAGCTTTCAGAGACCCTCATATCTTGCCTAGAAATGACTGGGAAACTCTCTTCTCTACC
ATATTGCCAGTACGTAAATGCTCTCAACTGCTGATGAATGAGCTGGAGAAGTGCTGGCAG
GAAAACATTCTGCTGCAGGGCATCTGTGATATAGTGAGACATCACGCCGAGAAACATTTC
CAAGTTTACGTCAAATACTGCGAGAATCAGGCTCTGATGGTCAAAGCGTTGCAGAGGCTG
AGAGAAAAACCAACTTTCGCTACGGCTTTGAAAAGGCTCGAGGCTCACCCGGCGTGTCAG
AGCCTCTCGCTACACTCGTTCCTGATGCTTCCGATGCAACGTGTGACCCGACTTCCCTTA
CTAATGGATGCTGTGCTTAAGAACCTCTCCTCTGAAGACGGGGAGTATGAAGCTTGTATG
CACGCGCTGGCCACACTGAATAACTACGTCCAGCAATGCAACGAGGGAGCTCGCAACACT
GAACGAGTCGAGGAGATGTACAGATTAGCGCGCGTCATAGAGTTCCCTATCAATCTGCAG
CGACCGCCGGAGCTCGGACCCGCGCTCACGAGGCGGGACAGACGTCCTGTGAGATGGCTA
GTCAGATCCGGTGAGATGACGCAACTCGTTTGGAAGAACGATGAACTCAAACTGACGTTC
GGCAAGAAGTTTCACAAAGTGCCGCTACATTTGTTCCTGTTCAACGACTACCTGGTTATC
ACTAAGAAGAGAAGTGAGGAGTCGTATATGGCGGTGGACTACTGCCCGCGCTCGCTGCTG
GAGGTGTGCAGCGCGGAGGGCGTGGCCGCCACTAAACACGCGCTGCTACTCACCCTGCTC
GACAACCACGAGGGGAGGACTGTCGAGATGCTGATGTCATGCGTGAGTGAGACGGAGGTA
TCTCGTTGGCGCGAGGCGCTGTACGTGCCGGCCGCCGCGCCCGGGGAGGCTGTGTACGCG
GGCTGGGACTGTCCACAGGTATGTGCGTTGTACGCGTACAGCGCCGCTCAGCCCGACGAG
TTGTCGCTCGCGGAGGGAGACGTTATCAACGTTACTAGGAAAACCGCTGAAGGTTGGTAC
TACGGCGAGCGCACCCGCGACGGCGAGGCGGGCTGGTTCCCCGGCGCCTACTCCGCAGAG
ATCGCCTCGCCGCATGTCCGCGCGCGCAACCTGCGCCAGCGGTACCGGCTACTCGCGCTC
TCCGGGACTTACCTCGGACATAAACGGAAACTCATATAACCACTCGTCAGTAGCTGTCCA
ATTATACCTATAGATGGCACCACTAGACTACTGTGTACGTTACCTACGTACCTACGTTTT
CCGGAACATATCTAGGACATAAACGGAAACTTATATAACGTGGCATGGAGCTTTGTAAGG
TAGTTCAAAATTTGACGTTTTGAAGATCACATTACGTCCCCTCTGCCTTCCGAAACGCAC
CTCGGGCATAAATGGAAATATAGTACACAAACCTGGTGTTTGACTTAGACGGCATTGGCG
ATAGTAACCAGATACTAAAATTCATTTTTTTTTTAATTATGGTCGCAAGACCAACATCAG
TAATTATACTATCGGAGACTAATCTGATGCGCAAGACATCACTGACTACGGACATCGCTC
ACTGTGCCGGCGGCAAAAATGACCGGATCCGGACACAAACACACCAACCGTAAAAACCTT
GAAAGTCAAAGTCCACCTGTACACAACTTTAGATATAGACCTAAAGCTGCAAAGAACTTT
TCGAACTCGATTGTTACTTGCCAGCTGCAATATAACTGATGTTGGAACGGACGCTAAATT
CTATTAATTAAGGAGTTGTTGTGCTTTAAATTTAGTTTCATTGTATTAGAAAATGTGGTG
CTAAATTATTAGATGTTTTTCTTGAAGAAAATGTCCGTCCAGACACTGCCTTCGTATTAA
ATTTGTGATAATTGGTGTTGTTTGCACTGAAGTTACGTGTGTGACACGCTTTAGCTAATG
ATTAATTACATAAAATTCATTTGTCACTAGTTCACTGAGTATGACAATTATCATACATGA
TATCATTTGTTTTGGACATCCAGAATATCATTGATAATTTAGTAAGTGATTTACAGTCAC
TAACACTATTACTAAACGGGTTCTT
(5365 bp)

- SilkBase 1999-2023 -