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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27106_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup214_isoform_X2_[Bombyx_mori]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0046826 P negative regulation of protein export from nucleus
GO:0051028 P mRNA transport
GO:0090204 P protein localization to nuclear pore
Transcript
Level		FPKM:2.38 TPM:2.01
ORF EntryO_TrvaMG16241_5prime_partial:A_TrvaMG_comp27106_c0_seq2
Sequence
(Nucleotide)
TTTTTTTATAGGTAAGTCTTTATTGAATCAAGCAATACAATCACAATTAAAATCTCAATT
GCATAATAGGTATAACTAGATAAGGATTAATTATTCATACATCAAATTGAACATAATTTA
TATGTAATTACTAATAATATGATTTTCTTCTCATGACGTTCTTAAGTTACTAGCCCCGCC
AACCGGTAAATGAGGGAGATGTGTTGAAACTAGGTGGTGCTTGTTGCGGTGGTTGTCCGG
ATTGTTGCGCCAGATTACCGAACGTCAAAGTATTTTGTGTCGCTAAGTTCTCGAATGTAG
CATTTGACTGTGTCGCACCGAATCCAGACATAGGAGTAGAGGCTCCCCCGAACACTTTCC
CTGGCGAGGTGCTCCCGAAGGCCGGTGCAGCTCCGAACACGCTTCCACCACCGAACGAGG
CCGGCGCTCCGAACCCGGTCGACGGGCTCTTCTGGGTGTTGAAGCCGCTGAACGAACCGA
AACCAGTACCAGTAGCCGTTGGAGAACCGAATCCAGCAGATTGCCCGAATACTGGTTTAG
AACCAAACACAGCAGAACCGCCAAAACCAGAAGCAGATTGTTGTTGAGGAGATCCAAAAA
CAGAAGGTTTGGCTTCAGTGGCCCCAAATGGTGAAGTTTGCTGCGCGCTACCGAACGGTT
GTCCAGATTGAGGGGAACTGAAGCTGCCTCCTGATGTATTACCAAATATGGAAGACGATT
GAGTTGTTGCTGGTTGACCAAAAGCAGTAGATCCAAAGCCTGTAGTAGAGGTAGTGTTAC
CAGATCCCCACAGATTGGGAGTTGGTGTTTGCCCAAACGTAGGCTTGCTCCCGAAAATGG
AAGACGCACTTGAGTTCGACTGCCCAAAACTGGAGTTACCTCCGAAAACGTTGGGACTGC
TGTTACCAAACACAGATCCCGACGACCCTCCAAATATATTCCCACCAGAACCCGGAGTTG
TAGCACTAGTAGTAGAAATGGTTGCAGATGCGAATAAATTAGCTTCAGCTCCTCCAAAGA
GCGAACCGCTCGATATGGGGGTCCCAAATATTGAGGATTGCGTTGTCTGTGTCGGAGTTC
CAAACACAGATGTTTGAGTTGTTTGTGTAGGAGTACCAAACACAGAAGGTTGTGCGGCGG
TCGGCGTCCCGAATACTGAAGGTTTCGTAGGAGTTGCACTTCCAAACACAGACGGTTGGG
TGGTAGGAGTTGTACCTCCAAATACTGAAGCTTGAGTTGTAGCTGTTCCTCCAAATACAG
AAGGCTGAGTTGTCGAAGTTGCACTTCCAAACACGGACGCCTGAGTGGTAGGAGTTGAAC
CTCCGAACAATGAGGCTTGTGTAGTGGGAGTTGAACCTCCGAACACAGAGGCTTGTGTGG
TTGCAGTTGCACTACCAAACACGGATGCTGGAGTGGTTGGAGTTGTTCCTCCAAAACCAG
CAACCTGTGTAGTGGGAGTTACACCAAATGTAGATGCTTGAGTCGTAGGAGGTGCAGTCC
CAAATACAGATGGTTGAGTTGTGGGAGTTGCAGTCCCAAATACAGATGCTTGAGTTGTAG
GAGGTGCAGTCCCAAATATAGAGGACTGGGTAGTTGGAGTTGTGTTTCCAAGCACTGAAG
CCTGTGTCGTAGGAGTTGCACTACCAAACACAGACGCTGGCGTCGATTGAGTTGATGATC
CAAATACTGAAGCCTGTGTCGTTTGAGGCACACTACCGAATAATGATGACTGTGTTGTAT
GACTAGAGAAAATCGACGGTGTAGATGTTTGTGTTGAAGTGGCAAATATCGTTGATTGTT
GGCTTGGGGTCGTTGCAGTTGCAAACATTGATGGTTGTGTTGTAGATGTACCAAATGTTT
GACTAGCTGCCGCTCCGAATATGGACGATGCTTGAGTATTCGATGGAGTACTTCCAAATA
CACTTTGAGTTGTTGCTGTACCAAATACTGTTGATGCACTAGTCGTAGCAGTCGCTAAAG
GTGTACTAAAAGCGGATGATTGAGTTGAAGTTCCAAATATTGACGTTGTTGAAGTTGAGA
ATACTGAAGGAGACGAAGTAATAACAGAAGTTGTTACAGTTGATTCAAATGTAACTGTAG
ACGTAATTGATGTTTTAGGAGCAGACGAATCTTCTGGTTTAACAGATTCGCTGCTTGAAA
TAGGCGTAGATTCTGCGGTTTTTTCACCGAATACAAAACTTTGTGTAGTTGTAGAACTAA
ATATTGAAGTTGTTTTTGGTTGTGAAGCTACAGCTGTTCCGAAAATAGAGGAGGCGGATG
TTGTCGATATAGTAAAGGACTTCGTTGATTCATCTTCTGTTTTAGACTGTGTCGTGGAGC
TTAACAGTTTGGAAGGAGCAGTTAATAAGGAAACTAAGCTAGATGTGTTCGTTTCAGGTT
GTTTATTTTCCGTTTTATCTTTTGTCGCAATCACTGTAGCAGTAGGCTGCGCAACGGGAG
TCAGTGGTGAAGGCTTCACTATTTGAGGAACAAACGTTTTAGGAACATTTTCTTTCTCGG
CCACTTTTTCAATCACTTTAGTCGATTCAGTGGTTTTTTCCGGTACCTTTTCTTTAACTT
TTTCAACTTTCACGGCGACTTTTTCAGTTGGTTTCGTAGTTTTTACTTCGACATTAGGAC
CTTGATGACTTTTTAGAACATCGGGAACATTCGAAAAACTAGAATGTGGGTTACCAAACA
TGTATGTGGGTTTAGTTATATTTTTGGTATCAGTCGTTTTTGCAGTACGTTCTGGTTCGC
CAGTTTCACTCGATTTGGGAGCTGTAGTTGTTACAGGTTTGACTTCAAAAGCAGTGGGCC
GAGAAATATCACTAACTACTGGTTTCGTTGTGAATTTACTTTGAGTCTCGATGGTCGATT
GTTGATTTGAGAAAGCGCTGGGAGAACATATCTTCTGTCCCATAAAATGATTCGCATCGT
TCTTTGCTTGGAATATATTGTTAGAAGCGTAAGTTGCACCACCAAAGCTAAATGACTCCG
TAGGATTCTTTATTTTGAAATCTTCAGCTGGTTTCGGTTCAGTAAATAAAGTTCTAGTGA
CTTTTTGTAGTCCAGGTACAGTAGGTTTCACGATCGGCGAGAACGGTGGGGCTGTTTCCA
ATTGTTTCGGTTCTGTCTTTGGTTCTATTTTGATGGGATTTTCTTTTGGTACACTTATAA
CTTCAGGTTCAATTTTGACTTGAACCTCTTTGTTAACGTATTTCTCAGCACTGGCCGGTT
GTGTTTTTACTTGCATAGCCTTTTCATATTTCGAACGCATCGTCGCTAAATGATGTTTAA
TTTCAATATCGACTGGCTTTATTTTAACGGTTTTGTGATTCGATAACAAATCTCGTAATG
CTTCGTACTTTTGTGCAGTAAGTAAAGGTTTCTTGGTTTTTGTTTCGGCTTCTATGCTCA
TGTTCAGTATGTTTTTAGTCAACTTTGATAGTGGATCCTTGTTCCTAAAAGGCGTACTTC
TCAACAATGATGTAGATTTTCCAAGAGGCGCAATATCGCATTCTTTAAGTGCATTACGCA
AGTTCCTAAGTACTATTTGTTGCCGGCTCAGTATCTCCTGTTGTTTCACTAACGGTTGAT
ACACATCATCCAGTTTTGGACGTATCATATATTTACCGGGTTTAGCATTAGGATCATTTG
TCGCTATTTCGTTCCACTTATGATCCAATGCCTTCTGAGCTTGTTCAAGTTGATTCTGCA
CGTAGTACGCGAGTTTCTTTACTGAGGCTACTCGTTTAGTTGTTAAAGGATCAGCCTGGC
TCCATTGTTGTAGATCTTTTGTATCAGCGTGGGTTCGCGCTTCGGCAACCAAAGCACACG
TACGAACAAGTTCCAATTTCAATTGTATTATAGCTCCTCTCAAATCTTCAAGGGAACAGT
CTTTCTTTAATTGTTCAGAGTCTAACGAAGTGAATTTGAAGTTAGCGCTTATTGATTCGA
TGTCGCGTTGGAGCTTAGCTTGAGTTTCCTGCGTTTTGACCATAAACTTGTAGAGTTCCA
TTTGGAAATCATTGACTTCTTTGACTAGCATGTTCTTCAATTCCTGATTAGCCTTCATTT
TGTTGAGTCTCTCTTGTTCTTCTTTTAAAGCAGCGTTTTCCTGTACCTGGGGCGGTGGTT
GTGTTGGAATCACAGCTGGTTTGGGTTGCGGTTGAATTGGTTTGGCTTGAACTGAAGGCT
CAGGTGGCTGTTGTGGTATTGTAGGCTTTACAACTGGAGGGGCTTGACTTTGGTTACCTT
GATTTGAAGCAGCAGTTGCAAATACAGAAGTAAATTGTGGCTTCGGTACTTTGATAATAT
TGGCTGTACCAAAAGCGCTGGTCGGTTGTGGTTGAGTACCAAAGTTACTAACGGCTGGTA
CTTGAGTTTGATTACTGGGCGGCTGAGGCTGGACAGTTTGAGGTGTTTGTTGGATCACTT
GAGGCTTTGGTTGTACTATTGGCACTGGAGCTGCAATGGGAGCTGCCTCAATTAGTGATT
CTCCTGGTATAGAGCTGGTTAATGATGCTGCAGGTAACGTAAATGGCTGTGGCGGGGTGC
ATATTTGAGGCGCTCCTTTATTCAAGTTCACAACATTAAAGATTGTTAGCAGACCAGTCT
GTGAGACTACCAAGAGTGTCGGCATGTACGGAAGAGTTTCGTTTTCACCCCAGGGCAATT
GATGTATGGCACTTGTGTCAAAGGAGATTCCCACTGGATAGTTTTCTGACTTTTTATCAG
TTAGAGGTAGTTCTGGTCTTGCTTCGTCGGGTTGACACCACTGTGTCCAGTTAACACCGT
CAGTTGAAGCCATTGTTGCGATTTCCATACTATTCGATGAAGATGCTAAAATGATGTTCC
ATTGAGTGATTCCTAGTAAGAAATAATACCAGGGTCGAATTGAGCCCATGCTAAAACACA
CATCTTCATAATTCAGGCATACTTGTTCTGTTTTTCCAGCATTCACAATTGTTACAGATG
GCCGACTATCATCACCAACACTTTTATAAACAACAGCAAACTGAAAAGTAGATATCCAAT
ACACAGCCAGTGCTTCAAGGGATGATCCTTCAGGTAACTTTGGAGCAGGTATGGTCTTTG
CAAGTGTCAAATCTGGTTTGTACTGACACAGGGTCCCATCACTGTTGCCTGTCACCAATT
GTTTACCCTTAGGACTCCAGCAGATGCATCTAGCTTTTGTTTGTACTTTCTTGACCTGAT
TAGTAGTAACTTGGCAGACAACTAAAGTACCATCGTGAAAAGCTAACGCCAATGAATCTG
GTATGCAAGGGTTCCATTGTAAGGCTGATACGAAAGTCGATGAGTTCACATTTGTCTTCA
TAGATATTGATGGTGAAACATTCGGATTCTGAAAATCTGTAACTTTATAGATGCAAAGAG
CTTGTGGTCCAACTACTGCAAGAAGTTCTTGGTCGCAGCTCACTGCAATATGGGTGGCAC
TTTCCGGAAGCTTCACACAGGCATGCTGAGTCTCGTTGTTCAGTAATTGTTGTAAAGAAT
ACACAGACAGTGATCCATCAGGTACAGCAATGAAAACTATGCCGTATTTGCTGCTGCTTG
CTATCACATTATATCCACGGTTAGCGAACTTCTCTTTGGTGTGAAAA
(5627 bp)

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