SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27100_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_MAGUK_p55_subfamily_member_5-like_[Bombyx_mori]
Ontology
GO:0002011 P morphogenesis of an epithelial sheet
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007009 P plasma membrane organization
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0032287 P peripheral nervous system myelin maintenance
GO:0032288 P myelin assembly
GO:0035749 C myelin sheath adaxonal region
GO:0035750 P protein localization to myelin sheath abaxonal region
GO:0043219 C lateral loop
GO:0043220 C Schmidt-Lanterman incisure
GO:0043234 C protein-containing complex
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
GO:0070830 P bicellular tight junction assembly
GO:0090002 P protein localization to plasma membrane
GO:0090162 P establishment of epithelial cell polarity
Transcript
Level		FPKM:1.99 TPM:1.68
ORF EntryO_TrvaMG16207_complete:A_TrvaMG_comp27100_c0_seq3
Sequence
(Nucleotide)
CCCGTTGAAAATGCATGAAAGTAAAATATAAGTGATCCATCATCATGTAACATCATCAAC
TAAATTCGGGAACACATCACTAAATTCTATATTCTCTACGGTTCTCGTACATCTATCACT
ACGGGAAACTCTCTTCGACGTCTTGTATTTCAAGTCGCAAGCATTCGCAAAGTACATTAG
TAAGTTTATGAACATTCGTATCATTTCGAATATAAACATAAATAACATGACACTTGTTTT
TTCGACTTGTATCAGTCTTGTAGTCGCCGGTTTGGCAACTAAGTTTTCTCGCTAGGTTTG
TTTGAGCCAATGCGCGGGAACCCACTGCGGTTCGCTCGAGGCTGTTGATCTCGTTCAACA
GTTGTTGGTAGGCACGTTGGGTGTCGTTATTTATAATAATCATGTCGAATAAATGGCCCC
ATCTTAGCTCCATGTCTCGGGCTGTCGCTATTATGTCTTTTAGTTCTTCCTCCTTGAAAG
CTTCCGCATTTCTTATTTTCTTTTGTCTAAGTTTCTCAAGGCTGGGCGGCGCCACGAACA
CCGTGTAGGGCTTGAGGTCGGAGTTGCGGAGGATCTTCAGAGATTGCGGGTGAAGGTTGA
GGACGCATATTTTACCGGAATTCACTACTTCGCGTATCGCTTCTAGTGATGTACCGTAAT
AAGCCTTCTCGTATTCTCCGTGTTCGACGAACTTCCTGTTGAGTATGTCCGCCTCAAACT
GCGTGCGAGATATGAAGTGGTAGTCCTGGCCGGGGACCTCGTGGTCCTTGCGGGGACGAG
ACGTGTGTGGCACAGCGGCTGCGAACCTGGACCCGTCCTCCATCAACCTCTGCCGGAGTT
CATGTCGTCCTATGTTGGGGGGCCCTATCAGCACGATGGGCCGCTTGTGTGAAGCTCGCG
GGTAGTACAACGCTACTTCTTCGTAGGTCAAGATCTCTTCTTGTTCGTATTCATCGGCCG
CGGTGGAGTAGAGCGGGTAGCCGGCCTCGCTGCTCGCCTTCTTGTTCTTCTTCTTGCGCG
GCGGCTTGCGCGCGCACAGCAGCGTGCCTCCCTTGCGCGGCTTGTCGCGCGCCGCCACCT
CGCCCGCGAGCGTCAGCTTCATTGATTCACGTTGATGCTGGAAGGCCTGACTGGGTATGA
GTCCTGCGAGGGACTGGTCCTCCTCTCCCTCCCTGTACGCCTGCCACCAGTTCGGGTCCT
CGCGGCTGATCACGTGTAACACGTCGCCTTTCTGGAAGCTTATACCTAGCTCCCTGCACG
GTATGTACACGTCGTCCTCCGGGTCGTAGTCGAAGTGCGCCCGCACGTGCAGCACGCGCG
GCGGCGGCGCGGCACGCACGCAGCGAGCGCGCGGCGCCAGCACGACACACAGCGTGCCGG
ACAGCGCGCCCAGCACCTGGCACACCTCGTGCACGGACTTGCCGCGCATCGCCACGCCGT
TTACTTCTAGTAGCTCATCTCCTTCATGTAATAATCCTGATTTCTCAGCGACACCTCCTT
TTACTATCCTTCCGATAATCACGGCTTCTCCTTCATTTCTTACTGTAGCACCTAAAGGTT
CATTAGTTTTTTCTATTTTGATTATCTTGATGTGTTCGCTCGGGTCGTCGGGCGAATGCG
ACGTTAAGCCTTTATCGTCCTTGTAGTTATTACCATTCTTATGCCGTTTACTGGAAGAGA
AGCAGGTCTGGTCGAGCATCGCAGCGGCCTGGTCGTGCGCCTGTACGAGGTTCTCCAGCT
CCAAGCCTCCCAGGATGGACAGGAGTTCAGCTGCGATGGCTGACGTCTCACCTCCTGTAG
TTGTATGGGCCCCTAATACGTCCATGCAATCCTTCAAACTATCCGAAGCATGTTTAGTGT
ACGGCGGTGCTAGACCAGGCCTCTTTTGTCTGACAGCTGTTAAAACAGCCGATCTGGTAG
CTAGGACTGTTCTCATTGCTGGACATAGTAAGGAACCGGCAGCGCCTGCTACCCTGGCCG
CAAGGGCCGTCTCTCCGCTCGCAGACAGGGCCTTTTGGACCCTAGTGAGGGCTGCACATA
CTTCTTGGTAATCAATGATAGTGTAAAGCTGTGACGAGTCATCGCTGAGGTCGTCTTCAT
AAGCATCGTTTACAAACGCAGTCCCCGACGTTGGTGGATTCGTTCTTAAGTTCTGTAGTT
TATTTGAATTTCGTATAGAATTCCTTAGAAGTTCATTTTGAGCTGCAGCTCTTTCTTCTG
CTTCTTTCCGCTGTCGTAATTGCTCCTCGGTTTCACCTTCGTGTCTACGACAAAGGCAGA
AATGTTTCAACCTGTCTACAGTCATACAACACTTCGACGTGTCCAAGAAATAAGCGTTCA
ACGTTTGCAACACTTTCCCCATTTCGGGCACTTCAACTGGCAACACTCGCGGTCATTTTC
CCCCGGAAAAGTGGAAGTAAGCGGTGATTTTTCCGGGAGTTTTTTTGGTGCTGCGATAGC
GGTGTGCG
(2468 bp)

- SilkBase 1999-2023 -