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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27093_c5_seq2
Scaffold_id
NCBI non-redundant
(nr)		adaptor_protein_complex-1_gamma_subunit_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0030665 C clathrin-coated vesicle membrane
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0032438 P melanosome organization
GO:0032588 C trans-Golgi network membrane
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0050690 P regulation of defense response to virus by virus
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
Transcript
Level		FPKM:17.39 TPM:14.64
ORF EntryO_TrvaMG16174_complete:A_TrvaMG_comp27093_c5_seq2
Sequence
(Nucleotide)
GTGGTCTTCATACACCCTGTATAACTAAACTGTTACTGCATTTACCTTAATCACTGTTTA
GGTCACATATCTTACTGTCCGACAGGGTCCGTTCCCTAGAGGCAGTAGACGAGCTGTTCG
GCGCGGTGTCAGTTGAACAGGTCGGCGGGGAAGTTGTTGACCTCCGTCTGCTCGAGCACG
GGGCTGCCCTCCATGTTGTATGACACGCGTATTCTGAGACGTAGTGGACTCTTAGTTGGG
TTAGTTACTTTTAATATTTGCGTAATTTCTCCTTGTGGGGGCAGCACTGTGCCCGATGGT
GACATCATGTCTAGTTGGATTTTCTTAGGCACAGCAGCCTGGAAGAGGAAGTCAGTTAGC
GTGTGATGCTGGCTGGTGGCGCGTGCTGTGAGCGTGGCGGAGTGCGGGGCGTGGGGGGCG
GAGTCCCGGCGCGCGGATATATACACGCGGACACCGCCGCGCTCGAGCACCACTCGCTCC
CAGTCTGAAACTTCAGCCGGTTCCGGTTGCGTGTTGGTGGCGAACAGTCCGTCCAGCAGT
AGCGAGGCGGGCGCGGGACTCGGGTTGATGTTGTTGTTGAGTAGGCTGACCGGGGCCGCC
ACCGGCGCGCTCGGAGTTAGATCCAAACCGCTGAGGAGGTCTAGGATATCGTTACTGGTA
GTGTTGTTGTTTGTAGTGACATTCTGTTCAGGTTGATGTTCCACGTCTCCGTTCGTCAGT
GAATCAGATCCGTTGATCAAATCTAACAGGGCGTCCTGATCGGGCTTGGTGTGCTCCGGG
ATGGCGTCGGAGAGGTCGTGGTCGGTGTCGGCGTGCTGCGGAGTGGACACGGGCTCCATG
GCGGGCATGCGCTCCAGGAGGGCGGGCCGGAGGTGACCGTATTGTCTGAACAACTGAGAT
AACTCAACGCCCCTCTGTTGCAGTTCAATGTGAATGTGAGATCCAAATGTATCGATGATC
ACTCGAATTTTTTCTTGACTGGCTTGTGTCGTGAATCGTGTTGATAGCTTCGCGAGCGAC
AACAGCAGGAACTCTTTAGTGCTAATAGACAGTTGCGTGGACCACAACAACTTCTGATAT
ATGTCTATCACATACTCTTCTGTTGGTCTTACGAAGTCATCTTCTCCATCTTCGTCGACC
ATAGATATGGCGCTGCTGGCTTCTGATACTAATAGATCACCGTATTCTCCAATGGTCCAA
GCGGCCACCTGCACTAGCGGTTGTTTCTCCGTGGCGAGTCCGGACACGGCGGACTGTTCC
AGCGACGTCCAGAGCCTCATGGCGGCGTACGCTTGCCGCTCGGTCGCCGCAGACGATATT
ATTTGTATCGTGCTCGATACTGTGTCGTCTCGCAGATAATTACCAGCCTTCAACAAAACC
TTGAACAGCGTGTCCAGATGCCACTTGTTGGAGGGTGCATATCTCTCGGCCGCGAGCACC
ATGGCGCTGGAGCAGTGCGCCTTGAACTCCGCGTCGCTTCTCTCCAGGAACGAGAGCAAC
TCCTTCATCATGCTGCGTATGTTCTGTCCGTTGATCAACGCGAAGGATAACTCCATGGCG
CGACGACGGATTGATATGTCTGGGTCCTTGAGACATTCCAAAATGGTCGTCCTATGCCTC
TGCACAGCCGATGTATCAACATGCACCGTCCTCAACAAAGTGTTCAGCGCCACATATCGT
ATATTCTTATCGTTGTTCAGCAAGAACCTGCCCAGTATATTGACGGCCAACACTCGCAAG
CTGCTCTCGGACTTGATGTCCATGATTGAGAGGACCGTTTCGTAGAGGATGGTGTTGCCA
ACGTTTTTGCTGGTCTCGGTGTTGGTCGCGACTTGGGCCAATATGTCGTTCATTGCTTCT
GATGCTTCGGAGTCGTTTTTGCCCAGTATTCGGAGGAGGCGAAGGATTTTGACCTGTAGG
AACGGATCGGACACACCGCTGACGTCATGCTCGGGAGAATATCCAGCCAGAATCAAATTC
TTCAATATCCTCACCAGATTAGGAACGATCTTTTTGAAATGGTTAAGCGTGTCAGGGCTG
TTCTCACACATTTCAGTGATAAGAGTAACACCGGTTATTAGTACACCATGATTCTTCTCG
GTAAGTAGACTCCTTGTAGCCGGTAGAAACATTTCCATTAGATCAGGAACTCTTCTTATG
ATTCTGAAGGCGCACAACGCCGCCTTCTTCTTGATGTAGGCGTTGGGCGATTTTATAAGA
CGTTCCACTTCCGATGCCAAGTCTCTGGCCATTTCCGGCGAGGCTATGGCACCGAGAGTA
CATAGAGCTAGACCGACCACGAACTGTGTGTTGCTGTTGAGATCATTCTTCAAACAATTA
GTGATGAGTAGATGCACGTCCTGACGTTCGTCTAACAACAACATGGCGCCGAGGTATCCG
ACCCGCTTGTCCGTGAACCGAGGACTCGCGATCAGCTTCAGACATTCCAGCTGACCGAAG
TGGGCCGGGTAGCCCAGCATGTGGATGTAGAGGAGCTTGGCTATGTTGCGACATCTCCAA
ACGCTGTCCTCTTCTCTGAAGGTAGATCTGATGTAGGCGCATTCCTTGTTGACGACGCTA
CGTTCTTCGGCCGCCGTCCTTGCGGCCCGGATTTGCCTGATAAGATCCCTAAGGCGGGTC
GGAGTCGGCATCCGAACTGAAACCGGCGCGACTCTTTCTATGGCCTCATTTACCACTTGT
TTGATTGTCGCAATATTGAAAGCCGGGTTGAACCTTCTGTTTTGCTCAGGCGGCAAAACA
CTCCAATCTACTTCATACATAGGATATGCCATGGTTGTGATGAAAACACACGAATTACTA
TAAACTTTTTAATAAAAACATTTCACAAAATATGCCACGATATTTGACGAGAGTGCAAAC
CGAACTGTTTGTTATCAGAGGTTTTATCAGGTGCAGGTGCTCCTCAAATATCCAGTCACA
ACGTATCTCTTATCAAAGGTACAATTTATCACTGAAAAAGGATAGCGATACCGCTTCTAG
TAATGTTTTATTTTCAAATGTCAATACAATGGGCCGTACGATGTGTACATCACATTATCT
TAATAGGAAAACTAATTATTATTCATTGTATTATGTAGGTACGACTTGATACGAGTATTG
AACATGCATCGTGTGTCGCTCTTTAAATGTTCATAAGTTGTCATCGTGGTTTCGGGGAGG
ACGGTCGACGTTGTTACGTTTTATGCAGTCCACGAGCCATCGAATGCCTTCGTCGACGCC
ATCACCAGTCAAAGCCGACGTTGCCATCAGCATGATATCCCGAGCGCCTATTAAATGGGC
ATTTTGATTGAATATGGGCTTAACCGTGTGAACGCCCATGCAGTCTGGAATGTCTTGTTT
GTTGGCGAGGACCAATAGAGGTACTCCGGCTAAATGTTCGGAGGCTATCATTCTGTCGAA
AGTTTCTTTGGACTCCGATACCCTGTCTCTATCTGATGAGTCAACTATGTAGATTACTGC
ATGGCATTCTGCATAGTACTTATCCCATAAAGATTGTAGTTCCTGTTGACCTCCAAGATC
CCAGAAATTAAGTCTAACTCCATTTACATCTATTTTGCCTATATTTAGTCCTACAGTCGT
AGTTATCCTATTTGGATTCATAGCCTTATATTTCTTAGTAAATTTCGTTTTCGTTGCCTC
CAAATATGTCGTTTTGCCAGCATTGTCAAGACCAAGTATCAAAACACAGTATTCGTCTTT
CTGTATTACATACTTATAAAAACCGTGTAATAATGTGTACATTTTATTTCATTTCTACAA
ATATTTTCTAAAATATTTTCATTCAAG
(3807 bp)

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