SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27073_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ABC_transporter_A_family_member_2-like_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0005102 F signaling receptor binding
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0010875 P positive regulation of cholesterol efflux
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0019725 P cellular homeostasis
GO:0030216 P keratinocyte differentiation
GO:0031424 P keratinization
GO:0032940 P secretion by cell
GO:0033700 P phospholipid efflux
GO:0034040 F ATPase-coupled lipid transmembrane transporter activity
GO:0034191 F apolipoprotein A-I receptor binding
GO:0035627 P ceramide transport
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043129 P surfactant homeostasis
GO:0045055 P regulated exocytosis
GO:0048286 P lung alveolus development
GO:0055085 P transmembrane transport
GO:0055088 P lipid homeostasis
GO:0061436 P establishment of skin barrier
GO:0072659 P protein localization to plasma membrane
GO:0097209 C epidermal lamellar body
GO:2000010 P positive regulation of protein localization to cell surface
Transcript
Level		FPKM:0.16 TPM:0.13
ORF EntryO_TrvaMG16008_5prime_partial:A_TrvaMG_comp27073_c0_seq1
Sequence
(Nucleotide)
TCGGAAACCGAGAAGTTTGTCAAAAGCTTGCAAGATTCCATCTGTACTTACATAGATACA
TCCAATTAATTTAAAGCCTGTAAAATACCCACCTCGCTCGTATCATTAACTACAAAGTTC
TCAAAGTGGTTTCTGAACATTCGTTCTACATCCACGTCATCTTTAAGATGGACGACCACG
GTGTACCCTTTAGCGCTGTATCTGTCCACAAACTCATCGACAGTACCAACGTCGTAGGTC
GTGCCGTCTATTATGAAGAATAGACGATTCGTCATAGGCAGATGGGTTTCTACAATGCTA
GAACTAATCAGTATACTGTGTCCTTTTTTCTTCAGCGCATATAATATTGAGTACATGGCT
CTCTGCACGAAGAACTTTTGGTAAGCCGTGCATTCGTCCAAGATGACGATGGGGGGAGCT
CCTATGACAGCAGCCGCGAAATGAACTCGATTACGATCAGCTGACAATAAACGTCTAATC
CTAGTGTGGGCTAGGTTACTTAAATCTAAAGCTTCAATAAGATTATTCAGTTCCCGTTTA
ACCTGATCTTTGGGAACTCCTCGCAATATTGCTATTAGTTCTAAAGCATCATACACACTC
ATCCATGTAGGAATCGATTCTTCTGAGCAGCTGATTGAGATTTGACGACGATACAAATGT
GGCTGTCGTTTGAGACTCCAATTAGTCATACACAACAGTCGACCGCTGCTCGGCATCAAA
TATCCTGCAAGGGTCTGACATAGCTCCACCCTACCGTGCCTCTTCAAACCGGACAACGCA
GTGATCTCGCCCTTCCTCATACCCACATACACGTCCCGTACCACGTAATGGCCGACCATC
TTTTTATTTACGTTTAAACCCAGTATGTATTCTCCGTACGTGTCCAGTGTTGACCTTTCT
GCGATCTTTAGCCTGTTCATTTTTCCAATGGCATCGGCTTTCTCACGTTGAGCCCCCGGC
TGCAATGCCTCTTCATCTAAATGTTCTTTAGTTCTCGATTCCATAAAGTAATGCCATGTT
CTTTGTACGATGTTATACTCAATAATGAGTAAGATTGAAGTATACAGAATTGCTGTGGAA
AGTATTTGAATAACTTCCTTGAGGATGCCAGGGTTTCCAGAGAGGTAGTTCTTTCTCGAA
AAGCAAGGTTGGAGAAGTCCACATTTAGAACAACACTTATGAAACGTGTTAGACGAACAC
AAATTATTTCTCTTGAAGATTGTGCATTCGCTGTTATATAGAAATATCTGTTTGATTTTA
ACAAACGCGTAAGCTATGTTGTACTGCGGTAAAAACACCATGAACTGTAAAAAGAAATTC
AGCACGTCTCCTTCGAATATTTTTTTTAGTATCGTTGTTTCTCCAAAAATAACATTTATA
ATAACAAATGTCATTGAATTCAACGCCGGCCTTCGACCCAAGCTGAAGAGATAAGCTTGC
GGTATACAACCCAATCCGTATATCACGAGCATGAATGGTACTACAACCATATCACCATAA
TGGTAGTGCGCGGAGGGGACCATTATATGCATGACGGTTACCATGACAACCGACATAAAC
AACACCAGTATCCAGTACATGATCAGATCGCAGAAATACAACGTGAACCAGTAACGAGCA
GGCGAGAAATTCATAGCGTGGCTCTGCAAATGTCGAATCATTCCGTGTTCTTGCGAAGGC
AGCAGAGTTGTGTGACATATCGTCAGTATCAACAAACATTGTATCAATAATGGTGCTGCT
TCAGCTTGCCTTATCCATGGAGATAAGTCCAGTTCCAACGGGTCATCAGTGACTTGTATG
GTGGCATCTAGTTTTCCAGTGTAATGGCGTAGTAGAGACACGAAGACCCTCGCCAAAGAT
TTAGCTGCTGCAGCCGTATCGTAATGCAGTGGGCTGTATAGAGCTTCGATTTCTGAATGT
GTTAGCGCCATATAAACGATTCCCCG
(1946 bp)

- SilkBase 1999-2023 -