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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27070_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0017016 F small GTPase binding
GO:0021537 P telencephalon development
GO:0021987 P cerebral cortex development
GO:0030054 C cell junction
GO:0034334 P adherens junction maintenance
GO:0043547 P positive regulation of GTPase activity
GO:0045177 C apical part of cell
GO:0048854 P brain morphogenesis
GO:0048872 P homeostasis of number of cells
GO:0050839 F cell adhesion molecule binding
GO:0060019 P radial glial cell differentiation
GO:0060563 P neuroepithelial cell differentiation
GO:0070445 P regulation of oligodendrocyte progenitor proliferation
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:3.64 TPM:3.06
ORF EntryO_TrvaMG15981_3prime_partial:A_TrvaMG_comp27070_c0_seq1
Sequence
(Nucleotide)
CAAGTTTAAAATTTATGTAGATTTCTAAGAATATATTTCAAGTTTGTTAGTTTTACACTA
AAAAAGTTACTGTGTTGTGATAAAGTGCTAACGGTTCTTTGAGTGCCTTCAAAAGTTTTA
GATTTTGTAGAAGTTATTGAAGTGATAAGTGATAGTTGTGTTTTCAATTGATTTATTACG
TAAATTATGATTCTTTTGGGGATTGAAGATGTTATAAGATAGCATGGCGTAGATTTCTAC
TACACTCACGACTGTCAAACAAAAAAACTAGCCACGAATATCCTACTTCAAAAATTGGAC
TCGATGCGGTGACACGATGGATCCAGCTGACAAGCGTATGCTGGAGCGCGAGGCGCTTCG
CAACATGATAAACCAATGGAACGCAAATCGACTAGATCTGTTCGCACTTAGCGAACCCAA
TGAAAATCTGGAGTTCCACGGTTGATGCGTTTCTACTTCCAAGATCTGGGTCAGAAGATA
GCAACGAAGTGTATCCGTGTCGCCTCCGACGCCACCGTCAGCGATGTCATAGAGATACTA
ATCGAGAAGTTCCGTCCGGACATGCGGATGTTGTCCCTGGGCTCGTACTCGCTGTGGGAG
ACGCACGGGCCGGACGACGAGCGTCAGTTGGAGCCGCACGAGAAGCCGCTCCTCGTGCAA
CTCAACTGGCACGCTGATGATAGAGAGGGGAGATTTCTACTTAAGTGCCTTACTAATAAC
GAGCCTTCCATCGCAGGGTCAGATAAGGGTGATCAAAATTTTAAAAGAAAATTGTCAAAA
CGAGAAAAGAAGGAACTAAAGAAAAAAGAAAAATTATCAAGATTGAAGTCAGACACCAAC
GATGAAAACAGACCTGTCGCCGAAAAACTTTATACTGAACTACCAGAAACGTCTTTCATG
AGAAGCATCAGTAACCCCGAGGCAGTGATGCGTCGCCGTCGACAACAGAAGCTGGGCCGC
AAGCTGCAACAATTCAAGTCTAAGGATGGAGGTCCCGACACCGGGGGAACATTAAGAATC
TACGGCGGTATTCTGCGGCCAGACGTGTCCTACATAACTCTGCTTTTATCAGTCAACGAT
TCAGCGGCCACTGTGCTCAAGGAAACCCTTGAAAAATACGGAATGGGACACCAGGACCCG
CAGCAATTCTGTATTGTACAGGAAGATAAGACTGACAACACGGAGTACATATTGGAAGAC
GATGAGTGTCCACTGGCGCTCATGAATATGACTCGAAGCTCCATCATGTTTCACGTGCGG
CGTCGTCCGGCTGACTCACAACCTCGTCGACGGAAGAAGAAGGTCGGGACCGGTACCAAC
GGACGTCCAGGGAACGAACCTTTGCTCGTCGAGGTCGCGCCTGACGCCACGCCTCTCGAG
AATGGACGAAGGATCCGAATTACAGATGTGGTTGAGGTTGGTTCCGGCAACGGTACAGCC
CTGCAACTGTACGGTCCTTCGATTCAGTCTCGACATTGTGTGGTCGCGCCCGCTGACGGC
GGTGGCTACACGGTCACGCCGATGCACGCCGACGCACAAGTGTACGTCAACGGACAGAGG
ATAATGCACACGCAACGATTACAGCATGGATGTCTGCTCAAATTCGGACGCGTATCGACG
TTCCGTTTCGTAGACCCCGCGCAAGAAAACATCATCAACAGAAACTTGGCGCAGTCGCAA
CATTATGGCTCCGGTTCCATATACGACAGGTCGGGCGCGTCCCCCGAGCCGGGCGGCCCC
GCGGCGGACAGCTCGGCCGTCGACGAGTACCACCGCACCGTCAGCCCCGTCTCCAACGAC
AACTACTACAGAGACACTAACGACAACACGCCCTACAACAACAACACGCTCAAACTCGAC
AACGAGTCGCTCATGATGTCGCAGCACCTCACCGACTCGAAAGACGATCACACCGGATCC
ATTTATAACGATCACGATCAGAACTCGAACGCAAATCGCACAGCAAACTCGCAATATAAG
GACAACTACGAAACGACGTTCGATTTAGATGGAAACGTCGAAACGAAGAGCATTTGTAGC
GCTAAAAGCGGAGGTTCGGGACACGAGAACAGGATGGGCGGAGGTCGCATGGGCCAAGAA
GCGATTCTGCCCGCCGTGCTGGAGTTCCCGGAGGTGGGGCAGCAGCAGTTCCTGGCGGCC
GTCATCACCAGACTCGACCCGCACGCTCCCGCTTTCAAACTCGCACCAGTATACACACTT
TACTTGTGTGCTAGGTACCGCGCGTCGACCCACTACCGGCCGGAGCTGACGCCGACGGAG
CGCGCCCACAAGCTCACAGCCTTCCTGCATCACGTCGCCACGCTCATACACGCCACTGTA
CAGGAACGCGCCACCGATTCAGCCGCTCAAGCGTTTTGGATGGCTAACGCTAGTGAACTA
TTGCACTTCCTCAAATACGATAGACACATCTCATCGTTTTCAACACAAGCTCAAGAATTA
CTAGCCATTACCGTACAAAACGCATTCAGTAACCTGGTGTCGTGCTTCGAGGAGAGCCTG
GGCGCGGGTCTGTCTGCGCTGAGCGCGGCGAGCGCGGCGGAGGGCACGGCCGCCACGGAG
CCCGCGCTGCAGGCCCTCGCCGCCGCCATGGTGCTGCTGCGACGATGCAGGGTCAACGCC
GCGCTCACCATACAACTCTTCTCGCATCTCTTCCACTACATCAACGCGGTGTGCTTCAAC
AAGGTGGTGAGTGAGCCCGGTTGTGTGAACGCAGCGTACGGTCGAGCACTGTCTTCGCGA
CTCGCGCTAGTGGCTGCCTGGGCAGAACGACAGGGACTTGAACTAGCGGCTGACTGTCAC
CTCGCCAGAACACATCAAGCAGCTCGTCTAATCCAAGGCGAGTACCGCACGGCGGAGGAG
GTGCGCGCGGCGCTGTCCACGTGCTTCAAGCTAAACTCAGCTCAAGTGCGGGCGCTGCTA
ACGCCCATCGCTCCACCTGACATCGTCGAGGCCGCCGTGCAACACGCCAGGGCGCTCGCT
GACGAACTGTGCCGCGCTGACGGACGGGAGATACGCGTGGAGGAGGGCGGCTGGCTGGGC
GCGGGCCTGCTGATCCCCGGCGACGGGTTCAGCGCGGAGGTGGTGCGCGGCGTGCCCCCC
GGCCTGGCGGAGTTCG
(3136 bp)

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