SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27059_c0_seq7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_and_SAM_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
Ontology
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:4.93 TPM:4.15
ORF EntryO_TrvaMG15908_3prime_partial:A_TrvaMG_comp27059_c0_seq7
Sequence
(Nucleotide)
GGCATTTGTGCGACCGTATTCATTGCCTACGACGATTATGTCATCAATAACTTTATAAAG
TGTTCGGGAGGCTTCGTATCTTGCATATATATGTTGCTATTGATATTATTCAACTAAGTG
ATCATGTGAAAGTGTTGGTTGGTTATAAAAATGTGATGAATTTGGTAATGAATATAATAT
CACATGGAATGCTTAACGTATTTTGCACTGATGGGGAACTGCCTCTTCAAAGGCTCCACC
ACAACTCTAGACGGCATCGGTCTTCGGCCAATGCCAGCGGAAAGGCCGAAAACCCTGCGA
AAATTGAAGTCAGTGTACGACGCATCACCAACGGATCCACCGGTGATCCATCCGGCTACC
TTGACCAGCAATGGACAGGCTCACGAGAGGAACCTCAACGGAGTGGAGGATGAGGTCAGG
AGAAGAAGCAATACTACCAGTTCAACGCAGAGTGGAGACAAGTCTCTGGCTATACTCAGT
CCTTTTGATGAACAGGAGGAATGGGCGAAAATATCCGAGATAATGGCATCATTTGGCAGC
AAGTTGGTGCGGGAATCGGTGTTCGTGTCCGAACTGGAACAAGAATTCACCTCGAGGCTC
GGTATGAGCTGCTCCGAGTCTAGTTTGAGTCCCTCCATGGCTTCAACACTTGGACTCTGG
CTGTCCGGTATCGGAATGCATGACTACGAAACTTTGTTCCTGGATAGTGGATATGACGAC
ATTGACTTTATCAACGGAATCATAGACGAGAACGATCTACGCGAAATGGGAATAGAAGAA
AACGATAGACAAAAAATATTAGAATCAACTAAACAGTTACCTCTTAAAATAGTCGAAATA
AGCAATAACCACAATAACAATGTTAGTAAAAATCAAAATGAATCTGTAGACGAGTGGCTC
AGGCATATAAGCTTGGAGCAATACAGCGAAACGTTCAGAAAACATCTATATGTGGATATG
GATAGGGTGAAGAGGATTTGGGAGGTGGAATTGACTGCTGTACTGGAGATACAGAAGGCT
GGACATAGGAAGAGGATTCTGGCTTCAGTCAGCGGTCAACAGAACGGACCGGCGAATAAC
ATAGAGGATATAAGTGCTGATCTCAATACTTTGAAAAATAATATACAACAGTTAAAAGAA
GAAATAAAAGAGAAACTACCATCGGAAAACCTCAAACCAGTCCCACCTCCAGTGGTACCA
AGTTTAGCACCTCCTGGTGGAGAGACCTTGAAGCGGAGTAAGAAGAACAGACCTGCTCCT
CAGCCTCCTAGACCCTCGGATCTGGAGATCAGGGCGCCTTCAGAACTCCTGGTTGGAGTA
CCGGGAGCTTTGAAGACCCAGTGGAAACACCAGCCGTTTGTGTTGGTGACTGGGGCAGTA
ACTTATGTAGCTAATTACCTAGGATCGACAGTAGTAAAAGAACTACGAGGCACGGAATCC
ACAAAGAAATCGATACAAAAACTAAAGAAATCAACCAAAGAACCTAAAGACTCTCCCGAC
ATCATCCTCTCTATAAGTTACAGAGGAGTCAAGTTTCTTAACACTATTACTAGGGAATTA
ATATGCGAACACGAAATCCGTAACATCCATTGCGCGTGTCAAGACGCAGACGATCTGACT
CACTTCGCGTACATAACGAAGGACCACACGACGAGAAGTCATTACTGTCACGTGTTCAGA
GTCGCTACTATGGACCAAGCCACAGAGGTCATTCTAACACTAGGCGAAGCTTTCGAGGTT
GCCTACCAGATGGCGCTAAGGGAACAATCAAACCGCACCAGAG
(1783 bp)

- SilkBase 1999-2023 -