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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27051_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101741008_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0007465 P R7 cell fate commitment
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043621 F protein self-association
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.89 TPM:1.59
ORF EntryO_TrvaMG15850_complete:A_TrvaMG_comp27051_c1_seq4
Sequence
(Nucleotide)
CTCTGTTTCTGATTTGTTTCGAATATCGCTAATTTGCAAAAAGAGTAAATTTGCGAATTG
ACATTACTCGAAAAGCCCAGGTTCAACTTTGCTTCAAACAACCATCAACACATGTTTTTA
ATCCAGTGTTGTAGATTATTTGTGAATTATTTCAAAATAATTAATGCATGAACTTCAGTA
AAAATCTGATACATCGTGATACATTCGGAGGCGGGTGTGCACTCATTAGAATATTTTCCA
TGAACATTATTTTTTGATTCTTTCATTATAGAAATACCTAACCAATGCTACAGCTATTTT
TTGTATGAAAGTGTAGTAAGTTTTGAGTGCGAGTGGTCACGTTTACAACAAAATGGATAA
CAGAAGAGAGAACTTGAAGAAGTCTTTAGGGATTTCGGAGTACCCTTGGAGCTCAGATGA
TGATGAAAATAACAACAATAATGATAATCAGGGTGCTCAGAATCTCATTAGGATGCAGTC
TGCTGAGCCCAGGTCAAGTGTTGCTAATGCACCTGGTCCCAGTGGGGTTTCACCATCAAA
CCCATTTGCTCGTCGCCGGGTCGATGATTGGGGTGACCAAGCGTTTTGGGGCATGAGGAG
GCCTGTGCACAATCAACTGAACTGTCCTGCAGCTAACAGACCGAGATTACTTCAAGATAG
ACCGTCGTCTTTCTCGCACCCACGGAATATTAATCACGTTCCGGACCCTGAAGCACAGGA
AAGCAACGCGGAAATGACTGCGAATGCTGACTTGCAAAGAATAATGGCTATCAAGAAGTT
GACCAGGAATATTCGCGAGAGACGTAGAATCAATTCACTGTGTGCTATGACTTCTCGAGC
CAATGCAAGAGCATTAGAAATTGGAAACATCAGGCATAATCCAATTCGTCCTTATTTTCC
ACGTTACTGTCGAGTTGGCGATCCGTCGACATCGGGCATGGGATCGGAAGATGAGCCACA
TCACCACGGCTGCGTCTCGCAGATACGACTCATGCGGAGCAACACCGCCGTCGACCTCAG
CCACACCGCGCCCGCACCGCTCAGCGTCGACATCAGCCGCTCCGATGACGACACAGAACC
TGAAAATGAACCAATGGTTGTCAACAGAGATGAAAATGATACACAAGAACCAATTGCTGA
AGCAAGCACTTCACACGAGACAACTCCTGGAGTTACCATGGAGGAGGAGATAGTTGAGCT
AGATCCTCCCGATGATGACACCAATGAGGATACCGACAACCGCCGAGGAGACGTCGCTAT
GAACGACGCGACCGCCAATAATAATGATGATGATGCACAGGAGGGTCCAGAAGCAGATGC
TGAAAGACAGGATACGGAGTCCGAAGCGGACGGAACTAAGAGAAGGAAAAGTGGTGATGT
TGGATTCCACACTGCAAGAGAATTCAATCAGGGTCTGCTCCGGCTGCTGGAGTGCCCGGT
GTGCCTGGAGTGGATGGAGCCGCCCATCGCGCAGTGCCGGCGCGGTCACCTGGTGTGCGT
GCGGTGTCGCTCGCGGCTCAACGCCTGCCCCGTGTGCCGCACCGTGTTCTCCAGCGTACG
GAACAGAGCCATGGAGGGAGTGGCGGAGATGCTCCGGTACCCGTGTCGCCACGGCTGCGG
GCGCGAGGTCCGTCTCCGCAAGCGAAGTCCGCACGAGGCGAGCTGCCCCGCGCGCCGCTA
CCAGTGCGTGGCGCCCGCCTGCAAGGACGCGCCGCCCCTGCCGCACTCCAGGCTCGCACA
TCACTTCCAGAACAAACACATGTCGATCTTGAAGATCGGTTGCAAGCACCAGTTCTCGAT
CAAGGTGAACGCGGAGCAGCACGACGACTGCGTCATCATGGCGCTCGACCAGATCTTCCA
CCTCAAGATAGACGTCGACATACGGACCTGGGGGATCATTATCTACGTCGCCTTCATGGG
ACCCAAGTCGCAGGCTAGCAATTATACTTATGAGGTGGTTGTGACCGGCCAACATCATTC
CCGCAAGCTAGTATACACGCGCGTCACTCACAGCGACCTCGAGAGCTCCTCCGTGAACGT
GAGCAGACAGGACTGCTTCCACCTCACGCTGGACCAGGCTCTCAACTTCCTCCGAATCAA
GAACAAGCAGTGTGAACCAGACAAGTCCTTGGAATTCAACCTTACTATATCGAAGCGAGA
GTTCCTAGAAACTCAGGACTCGGAGTCCTGACTGAAGGTCCAGCCTGGTGCGATCAAGAC
CGAACGTTGAGCACTCGTGAAAATCTAGGGCTGATGGGAGCTGTCATTTATGTATCGAAG
TTTAGTATAGAGTATACATTACACGAGAAAATAAAGGTGGTAAGGTGTTTAGCCTAATAT
TTCTTCTAGAACCTAGTTTTGATTACATTATTATTTTTGTATGTCCATAGTTAATACAAT
TTTACTATGGGACTATTAGACCTACAAATTATATTACGTAAATTTTATGTATCAATAAGT
TTAACAACAAAACAATACCACTGTTCACTACTACTCGTTATTCACCATAATCTACAGAAA
GCACCATCTACCATTAGTCATCCACCGCTACCATTAAATAAACAACCATTTACATAATTT
TCATTCATCACCTACAATTATCATTCTATCATCTAATCACATCTAAAAACTATAGCCCTG
AGAGCCCTAGATAACCATGAGTGAGCTTAGATGCCTGCTTGATCACCAGATTTAGGACTA
AGTCTTAAGTTGGCAACTGTGAGTTGAGTCGTTCACGGCACACTTAACACTTTAGTGTTA
CTGTGAATTTGAAACACGAAAAAGATAGAAGAAATTTTCGTGTTTTTGTAAAATAGTTTA
AACGTTTAGTATAAACCTCAGTAATATCTTATAATAGTCTTGTATAACGTTTTTGAAATT
C
(2881 bp)

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