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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27028_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106711740_isoform_X1_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.75 TPM:0.63
ORF EntryO_TrvaMG15693_complete:A_TrvaMG_comp27028_c0_seq2
Sequence
(Nucleotide)
GAGGGCTTCTCGATTACGTAATTCGTAGATGCAGACGTAGGCTGCGATTGAAGTGAAGTT
AGGGTTGTTACGTAACACGTAGATATAGACTTTGGCTTCGTCCCTCAGATGTGTGCGCTG
CAGTCGTAGGCTGGCGGATCCTGAGGGCTTTGTAGTTGTTACGTAACCCCTTGATCACGT
CGGGGTCACCAGTTGTTTGCGCCGCTGGGTGGTTGTCTTCGGTCGGTGGTGAAAATAAAT
AAATGTAGCACTTATTTGCAGTGGATTTATTTTCTTATATTGTTACAATAGGTACTTATC
GTGTGTACTTAAATGAGATATGTTAATATGATGTATGTGCGTGCTCGCGACCGTGTGCGC
AGCGCAACTCCTTCCTATGTTCCCCGCACCCGGTCGCCGCGCCTGGTCGCCGCGCCTCCT
CCGCCTCAGGTAGTGGTGGTGGTGGTGCTATTACGCCTTAACATCCACCCCCCCCTCGAA
AGTCTGGGAATTTCGAGCCTCGACGGTCTCTTCATCCAAAAGAGGACAAAGATTATGAAC
AGCGCGCCGAAGAAGACCCTTTTTTGTGTAGAGATCGACTACCCGTGAAACTCCATCGGG
ACCTGGGAAGAGCCTCGCGATGCGTGCCATTCGCCATTTCAAAGGTGGAACATTTGGCTC
CCGGACAATGACCAAATCGCCTTCCCGAAGTCCTCTTTGTGAGACACGCCATTTTGTTTT
TTGTTGGAGCTCACTCAGGTACTCATCCCTCCATCGACTCCAAAAGTGTTGTCTGAGGCT
TTCGAGGTATCGGTATCGATCTAATTTGTTGAAATTGATATCTCGTAGATCAGCCGACGG
TATAGATTGAAGAGATCGACCGATGAGAAAGTGCGCAGGAGTGAGGGGATCAAAATCGTT
AGGATCTGACGAGAGTGGAGTTAGTGGCCGAGAGTTGAGGATCGCTTCGATTTGCGTAAA
TAAAGTACTCAACTCTTCATAAGTTAAATTTTTGTCGCCTAAAATACGCGTGATGTGATA
CTTGGCCGACTTTACCCCGGCTTCCCACAATCCTCCGAAATGCGGAGAATATGCCGGTGA
AAAATTAAATTGAATTCCTTCATCGGCTGCGAATTCCGATAAATGCGAATTTTCTAAATT
AAAAAATCTACACATTTCATTATTTGCACCTACAAAGTTAGTGCCGTTGTCTGAATATAT
TTCTAGTGGCTTTCCTCTTCGAGATATGAAACGCCTAAGAGCAAGAAGAAATACTTCGGT
TGTCAAATCGCTCGCGACTTCCAAATGAACAGCCTTTGTGGCAAAGCAAACAAACAAACA
CAAATAACTTTTAACGATTCGACAACCGCGGCCTTTGCGCTCCGCTATGAAAAATGGTCC
TGCAAAATCAACCCCACATACTTCGAACGGTAGACGGGGAGTGACTCTGGAGGCCGGTAA
GATACCCATTAAAGGTTTAACACATTTTGCCTTAATAATTTTGCATAATTGGCATTGATT
AATTATACTTCTAGCCAAAACTCGTCCCTTGATTGGCCAGAAGTCGTTTCTCAAATTATT
GAGTAGAACTTGCGGACCACAATGTAATAATTTTTTGTGTTTGTAAATAAAAAGTAACTT
TGTAAAATTGTGTTTTGTGTGTAACAACATTGGATGCATTTTTTTGTAAGGGATATCTGA
ATGTTGGATTCGACCTCCAACCCGTAGGAAGCCGTCCTCGTCCAAAAACGGACTGAGAGA
TAAAATAGTGCATTTTGATGGTAAGTGTTCCTTATTTTGTAATGTTTTAATTTCAAACGA
AAAACATTCCCTTTGATGTTGCTTGATCAAAATATCTAGTGCGTTTCTCAGTTCGGCTGG
AGAAAGAAAACCTGTAAGTTTTGGTTTATCCCTTTTGAGATTATTAATGAATCGTAATAC
GTAGGCCATGGATCTATGCATGATAGTAAATCTTGAAAATTTATCGAAATTGAAAATATT
TTGCTTGTTAGTTAGTGTAGATTGTAAAGTAGTAGTAGTTTTGTTTTGTTTAGTTTTAAG
TTGTAAATAATTTGTAGGTTTCGTGTGTCCAGGGTTAGATTTCATCTCCGGCAAGTCTGT
CTTAATTTTGTGTATATTACATTTAGGCCAATTGGTTGAATCTTGGCCTAAGAAGGACGG
TCCTTCCCACCACTGTGTAGCTGATTCGACTAATTTTGGATTTATGCCTCGAGATGCTAG
ATCGGCTGGATTTTTGTCTCCTGGAACGTGTCTCCAGGAGTCGATGAAAGTTAATTCTTG
AATTTCAGCTATGCGATTTGAAACGAATGGCTTGAGTTGATAGGATTCTGTTGACAACCA
ACATAGAACGATGGTAGAATCTGTCCAATGAAAGATATTGTCTATTTTACAACGTAACGC
CTTAAATACCTTCGTACTTAAGCGAGCTGATAGCAATGCACCGCATAATTCGAGTCTCGG
GATGGTTGTAGGTTTCAGAGGAGCTACTTTGGTCTTGGCACAAAGCAACCTCACCAAGAC
TTGACCCGAGCAGTCAACGGACCTCATATAAATGTTAGCCGCGTACGCGACCTTTGAAGC
GTCTGAAATGAATGTAATTCAATAATTTTAGGCATGTCAACAAATACACATCTAGGTATT
TCGATGTTTGACACTGCCTGTAAGTTCATAATAAACGTTTGCCATTCTATGTTCAAATCG
GAATCCACCGGATCGTCCCAATCTAACTTAGACATCCACAATCTTTGCAAAATTAACTTT
GGTGTAATGGTGCATAAACTAAGTAAACCCAGGGGATCGAATAACTTTGCAGAGTTCGAT
AAAATAATTCGCTTAGTTGCAGAATTATTGTTTTTTAAATTTACTGGAAATCTGAATATA
TCCTTACATGGATCCCATTTCAAACCTAAAACACTAGGTTCTGTATTTAGTTCTAAGTTC
TTTAGCTTGGCTACACTTTTTTCGTTTTCTACAATAGTAGTCGCATTACTCCGCCATTTT
CTTAATGGCAAGCATGCTGAATTGAGTGTCTCGGAAATTAAAGATTTAATTTGGATTACT
TCTGCTTCTGTTTCACCTCCTGATAATAAATCGTCTACATAAAAGTCTTTTGCGATTATC
TGTGACACTAACGGATGACTACACTCCTTTGATAATTGAATTAAACACCTGGTACTTAAA
AATGGGGATGAAGCCATGCCGTAGGTGACTGTATTTAATTTGAATATTTTGATTGATTGA
TTAGGCTCATCACGCCATAAGATTAATTGCAAATTACGCTGAGATGGCTCTATCTTTATT
TGTCGGTACATTTTTTCCACATCCGCAGATATTACAAATCTATGTTGTCTGTACCTCAAA
AGAATAGAGAATAGATCATCTTGTACCACTGGACCCACATGCTGGACGTCATTGATGGAG
ACTCCTGATGAAGTCTTGGCGGAGGCGTCGAATACGACTCGCAACTTGGTAGTCTCGCTA
TTTTGTCGAATTACAGCGTGATGGGGCAAATAGCAACCAAATTTAGGTTTAGAAATTTCA
GTCATATGCCCTAACTCTTGATATTCATTTATGAATTCGCGGTATTGTTGTTTTAAGTTG
GGGTGTGACTTAAGTTTTTTTTCGAGTTGAAAGAATCTTTTTTCGGCGATACTGTACGAG
TCACCGAGAGCATCAATCGACATTTTTAGCGGTATTTGTACGTAAAATCTACCATTAGTA
TCTCGATGAGTCGTGTCATTGAACAAGTTTTCGCAAAAGTTAGTTTTGTTATTTTCAGAA
CTTAGCGGTGGAACTTCTTCGAGCTCCCAAAATTTGGCAAGTTGAGTTTTAATGTTCTGA
GAAAAGTAACAATTAGACTTATTACATTTTTTTGAATTAAACCTTTCGCCTATTGGTCCT
GCAACTATCCAACCCAAGTGGGTGGCTTGGAGAATAGGTTTTTGTGGTCCTAAAATAATT
TTATCTATGAGAAGAAGATCCCAAAATACGTCCGCGCCTAGCAACAGATCTACTTCTGAC
GGCTGATTGAATTGAGGGTCAGCCAATTCAATGTTTCGTGGAATACCCAAGTTTTGAATG
CGGACTGCTGCATGAGGCAGCTGATCAGTTATTTGAGGTAAAACAAAACATTTGATTGGA
AGCTTGAATGTAGTGTGCAACGACTGTACATTAAGGTCGCAATATTTCGATGTATTAATT
AAAATATTCCCCAAACCACTAACACTTTGGTGAGTATCGCGTTTTGAGCAAATACCTACC
CTTTGTTGAGCCTTCTCACTAATAAAGGAAGTCTGACTACCGCAGTCTAGCAGAGCCC
(4318 bp)

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