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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27021_c3_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_factor_related_to_kappa-B-binding_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0002020 F protease binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006954 P inflammatory response
GO:0006974 P cellular response to DNA damage stimulus
GO:0031011 C Ino80 complex
Transcript
Level		FPKM:1.91 TPM:1.61
ORF EntryO_TrvaMG15620_3prime_partial:A_TrvaMG_comp27021_c3_seq1
Sequence
(Nucleotide)
GCAAAGAGTAGCACTTGTTAATGGAGCTAAGAAACTTATGTTTGGTGGTCCAAAAATTGC
ATCTCCCATACAAAAGATTAAGAAAGCATCCAAAAAAAGATACGGCTGCCAAAAAGATAC
AGGAAAATAAAATAGCAAAGAAGATTAAAGAAGAAATTGAAACAGCAGATATAAAACCTC
TACTACAAAATGTTAAAATAAAAATTGAAAAGGAAGCAAGTGATTCTGAAAATTCATACA
TGGAAAATGCTATGAGTCCAAAACAAATAAAGAAACACATGGAACAAGTTGAAATAAAAC
AGGAGATTACAGAAATCAATTATGATGATCAGTTTGATGCATTAATAAAACAAGAACCAC
CTGATAGCATGCCAGTTTCACACAGTGGAAAGATTGATCAACCAATTCCTATCAAATTAG
AGGATTTAGATGGAATAGATATGATGGCGCTACCTATAGAGCTAGCCGACGACACGGGCG
AAGTTATCAAAGTAAAACCTAAAGACGGTCGTGACGTCATGGTGGACGTCGACGAATCTT
TAACGGAAACGACACACGCTAACTTCTTGTCGCTCGTTCGGGCGTTGTTCCCGGCGAGGG
CGGCGCACCGGGCCTCTAAACAACAGTTGCACGCGAGATGTTCTGCTGTTATGAGGTCAC
CTATAGCCCCACTTAACACTTGGTATAACTCGTGCGACGATTGGTGTGCGGAATTAGATT
CAGCTTTGGACTTCCTGGCTGGAGAACGAGGTCCGCATCCCGACGATTTTGTACCATACC
TACAATACATGCCGGAAAATCAGATGTATCAGTGGATTGGTGCTGGCCGTGATTGTGATG
CAATTCTCGGTCGGTTGTGTGAACGGTGGCTTAGAGCTGCCGACGAACCGGCCTTTATTG
CGGAAGCACCACCACCTAGGTATCCAACTTCGTGGGTGATGCGAACGCCAACAAGTTTTG
AAATAGCAGAATTCAGAGCTCAGGAACGACGCAGATTTTCGTCTGCCGGAAAACCTTTTA
CCTACATTCAACATGGGTATCGTTCGGTGGTGGGTCCGTGCGCTCGGTCGTGGTGGACGG
GCGCGACGGGCGCGGGGCTGCTCCGCGGGGAGCGACCGAGACACGCCGCCTTCCCCGCGC
TCGTGCGGGACGCGCTCGCCCGGCTGCCCAACGGAGAGGGAACCAGACATCACCTGCTTA
TACTGCTCAAGATGTCGCAATGGATAGCACCTTGTAATGATCAATCGCTCTTAACTGCAG
TATCAGCCACATTAGACAAATTATGTTCTATAAAAAGAGATCCCGTAGTGAAATACGATC
AACGGACAGCTACCTGGACTTATTTACACAGGAATAGAACGGAAGAAGATTGGTTAAAAA
TAAGTAATAGAGGCAAAAAGTTTGGTGCCACCTCGATACCATCGCTGCCGGCCTCTACCA
CTCCGCCTGCTGTTAAACTGCAGACTCCTGCTAAAGACAAGCCACATTCTCCACAACGAG
GGGCCGAGATGGATTCCAGCAACCTAGAAGATGTTTACGATGGTTCGGATAGTGATGTAG
ATGTTGATGATACAAGTACTCCGGTACCTCACCTCTCCTCAGCGCAACTCTTAATGCAAG
CGACTCAACAAAAACCAGCTGCCCCACCACCCGCTAAACCAAAACCAAAAGTACCCACCC
CGCCCGCGAAACCAAAAACACCGCCAAAAACTCCG
(1715 bp)

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