SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27008_c0_seq9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:1.90 TPM:1.60
ORF EntryO_TrvaMG15571_complete:A_TrvaMG_comp27008_c0_seq9
Sequence
(Nucleotide)
TTTTAGAGTACCTTCTATTAACAAACTACTTTGTATGTGTAAAATGAACTGACATTTTTC
AGTGGTCTAAGGCCTTTCGAACAGACGTTGGAGTTGGTTAAACCCAACCCGCTTCACATC
ACTTACACTAAGTTAAGTTTACTAAGATTATAGATAATATTTGCGTGTTATAAATATTTT
TACTGGTATCGTGTTATGATCATATTGCAAAACAAGCTGTACTATAGCGTTGTCAGTTTA
GGAGTGAGTATAATAATACCTTGTTAGGGTTTGAGCTCATGTATGTAGGTACTGAAGCGT
GAGTCGGTGCGGGATATTAATGAGTACATGTTGTGGGTGGTCGGAGCAGCGGGGGGCAAG
GGAGCCAAGCGCGACTGGGTCATGAACATGGACGGACGCAGCTACCTCGCCGTCTTCCAC
GAGTACGTCGGCCGCGCGCTGCAGAAACAACCCATCTACGAGTTCAAGCAGCTCGAGAAC
GCGGCCACGCCGTACCAGGCGACGGTGTACATCGGCGGCATGCAGTACGGCGTGGGGCGC
GGCTCCAGCAAGCGACAGGCCAAGTCTGCGGCGGCGCGCGCCTCCATACACATCCTCATC
CCGGAGATGCGCGACGAGCTGGACGGCACGCGCCGGCACTCCGACCCCGACTTCACCTTC
TTCGACTACATCACCATCGAGGACCCGCGCGTCGCCGAGTTCTGCGCCGCCACCTGCGAG
CCCTCGCCGCACGCCATCCTGCGCACCTGTCTCCTGCGCAACTTCGGCGTCGGCGACCGA
CACGTGCACACCGAGATGAAGAAGTTTGAGAACCAGAAGGTCGAGTTGACAATGAAGGTG
GGCAAGCACACCGCCACCGTCGTCTGCAAGAACAAGAAGAGCGCCAAGCAACGAGCGTCG
CAGGCCATCCTGCAGGCGCTGCACCCGCACGTGCGGTCGTGGGGCTCGCTGCTGCGGCTG
TACGGCTCGCAGTCCGTGAAGAGCTGCAAGGAGAAGAAGCTGGAGGAGCAGCAGATCACG
CTGCTGCAGGACAAGGCGCGGCACAACGAGCCCAACTACGCCGTGCTGGACAAGCTGCGC
GCCGAGATGCAGGCTCTGAGGGCGCGCGACGCCGCCGTGTGTCCCGTCGGAACGCTGCTG
CTGGCGCCGCCCGACCCCGCGCGCGCCGCGCTCAACAACGTCGACCTCTGACACGTGTCC
GGCTGCCTCCCGCTGTTTGTGTTTGTGACAATACAATATCATGTTCTGGCACACTAAAGT
ACCGTAGCTTAATTGGCATCCATTGAGAAGTACAAATTAGAGTAGGTACTATAATGTAAG
ATCTACGACGTATAGACACTAGCAACAAAATAATAAATATAAATAAAGATTTAAACTCTC
TGAGATCTAAATAACTCAATTTATAAGTAGCAAAATCATAATATATTATTTTTGATAACG
AACAGCAAGTTTGATTGAAAAATAAATATTTAAGTTAGGATAAAACTGTCACATGATCTC
GATTAATTGATTCGAAACTATTCGTTTTGTGACGAATTTATTAGGTTCAGTTTGGAGTAT
GGCCACAATGAATAGTTTTCAAACATTCACCCTGTGTATAGGACCTGCGACGGACTAAAA
CCGTATGTTCCAAAATATTAAATATCAAATCAAATTTTTGATAATAATGTAAAGAAAACT
CTTTTAGTATTGCTACGTGTTGAAATTTTTATGATGATGAGTCTAAAATCTAAATGAATC
ACGTGTGTTTTAGTTATTAGTAGAGTACCTACTGCTTGTCTGTAGGAGACGACGGACGAC
TTCCACTAAGCGAATTCAATACCCTGTTTGTCTTTAGCTTTGAAGAATATAAACCAAGTT
AAGAGATGGAAAATATATTAGATAAGATTATTTTGTAAAGAATGATAACGCTTTATTCGA
CCTCCACACTACGTTAATGATAGGTAGGTGTAGTGTTCTGCGGAGACAGATACTGTACGA
GGGACGTCGGGGCATCCAATAGTTTACAGAAGGACTGCACTGTGTTTGATCTGTCGTATA
CCGTGGCCGCGCCGAGCCCGCGCCGAGGCCGCGCCGTGGTCGCGCCGAGCCCGCGTCGTA
ACCGCTCATTCTTATTAACGCTTTACAAATGTTTCGTCTACATTATTAGTATAAATATTA
TTTACTATTTCATGTTCTTAGAACATTGTATGAGACCTGATGATGTGAATTATATTTATT
AATAATAAATGGTTGTGTGATCGTAATATGTGCTGATTAATAACTAAAGTATTCAAGAGG
TAAATTACGTTTCCTATGAATATAGCTGTAAGTATATTGTGTTGTATCGGCCGACGGTCG
CTCGCGCCGGATCGGGCCGGGTCGCACCGGGTCGCAACACTGGGACACATTCAAACGCTT
AAACATAGCTTGTAACATGTTAGAGTTATGATTAAAATGAGAAGCCTTGTTTCTTGTCAG
TTTTATCACGAATTAGATAGATATGTAACTAAAGATGATATTATTATTAAACGAATTTCG
ACGTTAGAATTTTACATTTTAGTTAGTAAATTAGTATTATAATTATTGAGGTGCCTGATC
GAGACCAGAACAATACAATAGATATAGTCGTTGTACCAGCAGTAGCATTACAGTACAGAG
TGTAGGAGCAGCACGGAGCGGTAACATATCTCTTAAAGACACTCACTCATTAACGACGAT
ACATACTATTTTTGTAGAAAATATAGAATTGTTTAATAACTTCACGTATATTTACGGTAA
TTAATTACTTAATTGTTCGAGTTTACAAATAAAATATTACATTTTCAAAGCTTAAAAAAA
AA
(2822 bp)

- SilkBase 1999-2023 -