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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27008_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:2.54 TPM:2.14
ORF EntryO_TrvaMG15564_5prime_partial:A_TrvaMG_comp27008_c0_seq5
Sequence
(Nucleotide)
GCGGGCTCGGCGGCCGGCGGTAGCGGCGTGTGTCCGCGCCGGCCCGTGGTGTTGCCCGGC
GGCCAGGTGATGCCGCCGCCGCGCGTGCAGTCGCTCAGCTCCAGCTGGAAGACGCAGCAC
CTCACGCACCAACAACTCAACGACTACTGCAAGAAACTGTTCAAATTCAAAACTGTAAAC
ATCATGTTGTTCAAGCGCTGGGCGGACCGCCACAAGTACACGAAGGCGCGCAAGCCGCTG
CAGTACCCGCGCCTGCCCGAGGGCACCAAGCTCATCGCCATCCCCGCCAACAACCACGAC
AACCAAGCGGGGGGCAAGGGAGCCAAGCGCGACTGGGTCATGAACATGGACGGACGCAGC
TACCTCGCCGTCTTCCACGAGTACGTCGGCCGCGCGCTGCAGAAACAACCCATCTACGAG
TTCAAGCAGCTCGAGAACGCGGCCACGCCGTACCAGGCGACGGTGTACATCGGCGGCATG
CAGTACGGCGTGGGGCGCGGCTCCAGCAAGCGACAGGCCAAGTCTGCGGCGGCGCGCGCC
TCCATACACATCCTCATCCCGGAGATGCGCGACGAGCTGGACGGCACGCGCCGGCACTCC
GACCCCGACTTCACCTTCTTCGACTACATCACCATCGAGGACCCGCGCGTCGCCGAGTTC
TGCGCCGCCACCTGCGAGCCCTCGCCGCACGCCATCCTGCGCACCTGTCTCCTGCGCAAC
TTCGGCGTCGGCGACCGACACGTGCACACCGAGATGAAGAAGTTTGAGAACCAGAAGGTC
GAGTTGACAATGAAGGTGGGCAAGCACACCGCCACCGTCGTCTGCAAGAACAAGAAGAGC
GCCAAGCAACGAGCGTCGCAGGCCATCCTGCAGGCGCTGCACCCGCACGTGCGGTCGTGG
GGCTCGCTGCTGCGGCTGTACGGCTCGCAGTCCGTGAAGAGCTGCAAGGAGAAGAAGCTG
GAGGAGCAGCAGATCACGCTGCTGCAGGACAAGGCGCGGCACAACGAGCCCAACTACGCC
GTGCTGGACAAGCTGCGCGCCGAGATGCAGGCTCTGAGGGCGCGCGACGCCGCCGTGTGT
CCCGTCGGAACGCTGCTGCTGGCGCCGCCCGACCCCGCGCGCGCCGCGCTCAACAACGTC
GACCTCTGACACGTGTCCGGCTGCCTCCCGCTGTTTGTGTTTGTGACAATACAATATCAT
GTTCTGGCACACTAAAGTACCGTAGCTTAATTGGCATCCATTGAGAAGTACAAATTAGAG
TAGGTACTATAATGTAAGATCTACGACGTATAGACACTAGCAACAAAATAATAAATATAA
ATAAAGATTTAAACTCTCTGAGATCTAAATAACTCAATTTATAAGTAGCAAAATCATAAT
ATATTATTTTTGATAACGAACAGCAAGTTTGATTGAAAAATAAATATTTAAGTTAGGATA
AAACTGTCACATGATCTCGATTAATTGATTCGAAACTATTCGTTTTGTGACGAATTTATT
AGGTTCAGTTTGGAGTATGGCCACAATGAATAGTTTTCAAACATTCACCCTGTGTATAGG
ACCTGCGACGGACTAAAACCGTATGTTCCAAAATATTAAATATCAAATCAAATTTTTGAT
AATAATGTAAAGAAAACTCTTTTAGTATTGCTACGTGTTGAAATTTTTATGATGATGAGT
CTAAAATCTAAATGAATCACGTGTGTTTTAGTTATTAGTAGAGTACCTACTGCTTGTCTG
TAGGAGACGACGGACGACTTCCACTAAGCGAATTCAATACCCTGTTTGTCTTTAGCTTTG
AAGAATATAAACCAAGTTAAGAGATGGAAAATATATTAGATAAGATTATTTTGTAAAGAA
TGATAACGCTTTATTCGACCTCCACACTACGTTAATGATAGGTAGGTGTAGTGTTCTGCG
GAGACAGATACTGTACGAGGGACGTCGGGGCATCCAATAGTTTACAGAAGGACTGCACTG
TGTTTGATCTGTCGTATACCGTGGCCGCGCCGAGCCCGCGCCGAGGCCGCGCCGTGGTCG
CGCCGAGCCCGCGTCGTAACCGCTCATTCTTATTAACGCTTTACAAATGTTTCGTCTACA
TTATTAGTATAAATATTATTTACTATTTCATGTTCTTAGAACATTGTATGAGACCTGATG
ATGTGAATTATATTTATTAATAATAAATGGTTGTGTGATCGTAATATGTGCTGATTAATA
ACTAAAGTATTCAAGAGGTAAATTACGTTTCCTATGAATATAGCTGTAAGTATATTGTGT
TGTATCGGCCGACGGTCGCTCGCGCCGGATCGGGCCGGGTCGCACCGGGTCGCAACACTG
GGACACATTCAAACGCTTAAACATAGCTTGTAACATGTTAGAGTTATGATTAAAATGAGA
AGCCTTGTTTCTTGTCAGTTTTATCACGAATTAGATAGATATGTAACTAAAGATGATATT
ATTATTAAACGAATTTCGACGTTAGAATTTTACATTTTAGTTAGTAAATTAGTATTATAA
TTATTGAGGTGCCTGATCGAGACCAGAACAATACAATAGATATAGTCGTTGTACCAGCAG
TAGCATTACAGTACAGAGTGTAGGAGCAGCACGGAGCGGTAACATATCTCTTAAAGACAC
TCACTCATTAACGACGATACATACTATTTTTGTAGAAAATATAGAATTGTTTAATAACTT
CACGTATATTTACGGTAATTAATTACTTAATTGTTCGAGTTTACAAATAAAATATTACAT
TTTCAAAGCTTAAAAAAAAA
(2780 bp)

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