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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27001_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_cabeza-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0035327 C euchromatin
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.37 TPM:2.00
ORF EntryO_TrvaMG15521_complete:A_TrvaMG_comp27001_c0_seq5
Sequence
(Nucleotide)
CGTGGCGTTTCGTCTAAATTCGTCTTAATTATTTTTATATTCTAGGCGCCTATTAGTAAT
TTAAAGAGTAATTATGGGCGATCGAGATTATAGTGGCGGCGGATACGCGTCGCAATATTC
CGTGCCTCCACCGGCATCTGCTGATAATAATAGTTACGGTGGTGGCCAAGGTGGCTACAA
TCAAGGTGGATACTCAGGTCAATCGCAAAATCAAGAATGGAGCCAACAAAATTCAGGAGG
GAATTCATATGGAGGTGGAAATCAACAAAGTAGTAACTATGGCCAAAGTTATGGTAGCGG
CTATGATAGTGGTAGTGGTTATGAACGCTCCAACGATGGTTACAACTCGAGTGGCGATCG
TGGCGGGAACAGCTATGGCGGCAGTGATCGCGGTGGCTCTGGTTACGGCGGCGACAGAGG
CGGCGGTGGTGGTTACTCCAGTGGAGACAGAGGCGGGTATGGTGGAGGGGACCGTTCCAA
CAACTACAGTAGAGACGGAGGAAATAGAGATGGTGGATATGGGCGGCGGCGGCGGTGGTG
GATTTGGCGACCGTAGTGGTGGTGGAGGTGGAGATATGGTAACTCAAGAAGACACTGTGT
TTGTCCAAGGAATGAATCCCTCTACCACTGAAGAAGAGCTGTGCCAACATTTTGGAGCTA
TTGGTATAATTAAGACTGATAAAAAAACACAACGACCAAAAGTGTGGATGTACAAAGATA
AATCTACTGGTCAGCCTAAAGGAGAAGCAACTGTAACATATGAAGATTCTAATGCAGCAT
CTTCTGCAATTCAGTGGTTTGACGGAAAAGATTTTAATGGAGCTACTATAAAAGTTTCGC
TCGCACAAAGACAAAATACATGGGGCGGCGGTAAAGGAGGTGGAGGAGGCGGCTTCAGAG
GTGGACGAGGCGGAGGAGGAGGAGGAGGTGGCGGCGGACGTGGTGGCGGCGGCGGCGGAG
GACGGGGTGGCGGCTCGCAGGGTGGTAACAACCGCGAGGGAGACTGGAGGTGTCCTAATC
CTAACTGTGGGAACACTAACTTCTCATGGAGGAAGTCTTGCAACAGATGTAACGAAGAGA
AGCCTGGCGGTGGGGGCGGTGGAGGCGGAGGCGCTCTGGGTGGAGGACGAGGAGGTGGCG
GACGCGGGGGCGGAGGCCGAGGTGGAGGTGGTGGCGGCGGCGGATGGGGAGGCCGCGGCG
GGGACCGAGGTGGTGGCGGCCGCGGCGGTGGAGGCCGAGGCGGCGGCGGCGGCGGTGGGA
GAGACGGGGACCGACGCGGATATGGCGGCGGCGGCAGAGACGGTCGTGACAACGGCGGTG
GCGGTGCTATGAGAGGGGACGGAGGTAGAGACCGGCAACGACCTTATTAAATAATGTAAT
TTTAAGGCTTAATCATATAATTAATATCCATGTTTTTCATAGAGTTCTTAAATTTAAATG
ATAATAAATCATTTAAAATAACCTTGACTCATGAAAATGCATAGTTTTTTTCATGTTTAC
TACTAGTAATAAAATAGAATACCACATGTATGTGAACTGAAAATAGTAACATTATTTTTA
ATCTAGAATTTAAGTTGTTTCTTCCATTGATGGGAAAATTAAAAATACGGGTATTTCTTA
CCCAAAATAAATTAGCATCTGCTTTTAATACAATAGTATTTTCTTCCTTACTGAATTTGG
CTTGCCTTGTCCTCAAACTTGTACAGCTATGGCATTTAAAGGAGATTATTATACTATATT
GCGGAGTAGATTGTTTAATTAGAAGTATGAAAAGTATCGCATTGTGAATTACCGAAATGT
ACATAGGATTAAGTAATGCATTTTACAACCTTCAATTTAGTAAAACTTCTCAATAAAGTC
TTTTGTAATAAAAAAA
(1876 bp)

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