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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27000_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:2.89 TPM:2.43
ORF EntryO_TrvaMG15512_complete:A_TrvaMG_comp27000_c0_seq2
Sequence
(Nucleotide)
GAAAAATATTCATCGTGAAAAAGGAATTGAAAATGATAAATATATTTCAAATTTTAAATC
ACAATCTCACACAGAAAAAAAACTTGTTTGCGAAAAAAATTTTGAAGATCGCGGTAAAAT
TGATCGTGAAAAGTCAAAAAGTAAAGATCGTCAAGAAAAGGACAAGTCTGAACATGAAAA
GTCAAAAGTCCACAGACACGAAAAACAGGAAAAACACGACAAAGATAAAAAAATAAAAGA
TGCACTTGCAGAGAAAATAAACACCGATAAAATAGAGAGAAAAGTTGATAAAGATCATGA
AAAACATAAAGAGAAAAAAGATGATAACTCTTCAGAAAGGCATTCTAAACATTTTGACGA
TAAATCTAAGCATGAACATTATAAGCGAGATAAATCTGAAAGAGACAGGAGGAAAAATTC
CACAGAAGAATGCTTATTTAAATCAAAACGTGACGAGAAGCACAGGCATGAAAAATCTAA
AAAAGACGGCGACTCCAAACGTGACACCAAAAAGGATTCTGAAAGTAAAAGTCGTAAATC
ATCTAGGGATGAATCAACTCGAGAAGTGAGTCGAAAAGATTCTACAGATTCTTCAACCTC
TAGAGCGTCACATGAATCAACTAGACACAAAGACTTAGAAAATGAAACAAGAGAAGATTC
TAAAGCTAAATCAAGACACAATGATCATGTCACGAAACATGACCGCGAAAAAGATTCGTG
TCTTAAAACATGTGAACCAAAAACCGAAGTTCCAGTAAAAACTAAAACTGAAGATAAAGA
TCATCATAAAACTTCTTCTGATCAACAAAGCAAAAATAAATCTGAGCAGACTGTTGATAC
TATAAAAAAAACTGATCACAGTGATAAACAAAGACATTATTCAGTGGATTCATCAAGTAT
AGACACGAAGAAGAAAGAACGTCAGAATTCATGTTCTAGCTTACCATCCAATATCGGAAA
CAAAAGAAGAATGTCATCACAAGATAGCATTGATTCTGTTCATGACGATATGAAAAAAAT
GAAAAGTGAATCGAAACATCCAGATCGAAGAGATTCAAAGGACACTAAAAATGACAAACA
TAGGACACCTAAATTCAGTAAAGGTCATTTTGCTAAAATAATTGAGAGTAAAACAAAAGA
TGAAAAACGAAATCAAGTTAAACTACTTGATGGTTGCAATTCTGATTATAAAGAAAATGA
CGGTAAAGTTAGTAAGTTATGCGATCGTATAAAACCATTTAAAAAAAAGTCCGAAAGATG
AAGAAGACTTATTTGCTGATAACAATAAACCAGATACGTTAGAAAACGATTTAGATTTTT
TGGCTACGTTACAATTAAGATCGAGTGAAGAAGATGAAAAACAGAAAGCTTTAAAAAGAG
AGATGAAGGAAAAGAAACGATTACAACAATTGCAACAAATTCAACAACTACAGATGCAAC
AGGACGCTTTACAACAGTGTGAAATTTTAAACCAGTTAAAAGATGACAAAAAATCTAAAT
ACGATGAAAAGAAGAAAGACATGCGTGAAAAACGTACGTCAACTGATCATAAGACTAGGG
AGGAAAAGTACGAGAACAGACGCAAAAACCGGAAACATTTACAGACTAGTGAAAGTTCAG
ACTCTGATGATGAACCGAAGAAACATTCTATATTTGATATAGTTGATGATGGCCCGACTT
ATATTTCCATGTATGATAAGGTTAAAGCTCGTTCATGCAAAAATATGCAGAAACAAGAGG
AAGAAAAACGACAAGAAAAGATTAAAGCAAAATTCAATCAACTGAAACAAAGTAGAGCTA
AAAGAGAAGAAAAGAAAAGATCCAGTTGGGACGAAGACAGTGATTCAGATATAAGGCATC
ATAAATCCTCAATTGATAATTCTACTGATGATGACTCTACTTTTAATAGGAACCATAGTA
AACTTGACCTTTCAGATTTCATTAATAATATTCAGAAAGCAGGTGATTTTTCAACAGATT
CAATCAGTGAAGGAAACTTGTCTAGTAAATTGTCTCGTAAAAATTCTAGGACTCGCATCA
TATCTGATTCTTCTGACGATGAAAAATCCAAACGAAGTGTAAGCAAAAGTCCTATTTTTC
GTAATAATGCTAAAAAAGAATCAATATCGGATTCTGATTCTCTGTCTACGTATAGAAACG
ATTTTGATGTCCGTGATCAAATTGATAAGGAAAAAAAGAATACTTTACTAAACTTATTTG
GAAAAAGCGATAGCGATGACAGTAAGATTAAAAATATTTCTGATAGAGATAACAATTTTA
AATCTTCTGTTATTAAATCGCTCTGTAATGATTTCTCTTCCGAAAACGAATCAATAGACC
GGCTACAAAATAGAAGTTTTAGTGAAATTCGAAGAAAGCACAAGAAAAAGCAAAGAAAAC
ATAAAACGGAATCGTCTGATGCTGATTTCAATAAAGAAAAGAACGACTCTATAGTAAAAG
AAACTGACATTGATGCAAAACATAGTGATAAAATTCGACGACACAGTAATAAAAAAGAAA
AGCGAAAAGAGAAAACCCGCGAAAGTATTGATATCGATGACTTTTTCGATGACAAACAAA
AAATTAAAAAAGAAAATGTATTACCCTTGAATAACACAAACTCATTTGACTGCCCCTCAG
AAATAATTCACATTAAAAAGGAGGATAAAATGGAAGACATATTTGGTCCTTTAACAGATG
AATCAGATAAGGAAGATCATCCGTCTAATAAGACAGATTTTATTTCTAAAGAAAATGTGA
CTTTCGGAAAAACTGAGGAAAATGATATCATGAATATTGATTTAAAATCCAAAGATAAAG
ATGAAACCAAACGTAAACGAGATAAAAAACGTAGCAGGGAAAAACATTTTATAAAAGAAG
ACATAATAGTTTAGATGTTGATGCAGTAAGCAAGGCTATAGAAGCTAGACTTTTTGCTGA
TTCTAACGTTGATGATCGTACTAAATCAGTTAAACATCTAAACGTAAATAGTGAGGTTAA
AGAGGAGACGACTGCTCAAAGTAAAGACCTGACGGAGAAACACGAAAGAAATAAAAGGGA
TTATAGAGACAAAAAAAAGAAAAAGAGGCGATGTAAAGATGAACGTATCAATCGTAAAGA
TATTTTTCATTCTCAAGACAGTAAAAATGATAATATTGAAAAACATAGTGTCAGTGATGT
TATAACCAGTGATCTGACACCTAAGGTACAAACACCCGAAAACATATTGAAGATAAATGA
AATTTCTAGTGATATTTTTGAAAGCAATCCCTTAATCGAATCTCCGAGTCTACCGAGATT
GACTGATAGCCCACCCAACATAACAAAACCAGAAATTAGCGATACTAAGGATAACGATGT
TATACTTGATTCAGATGCAACCAATACTGAAAGTTTGGAAGAAAAAAATATCGGAAATGA
AATCAATTTGGAAATTGTTACAGAGGAATCACTCCAAGAGGTTGGGGAAGAAGTTTCTTT
AGTCCAAATAGAAAATATATCTTGTAAAACAGATAGTCAACATGATAATTTCTCAGAAAA
CTATAGTTCCGAGGCTAGTGATGCCGTTCGTAGTATACCGTGTTTAGAAAATGATACAGA
AAAAGCAACAGACATTTGCTCAGAAATGAACGATCTTAGTAAAAAAGTTGACGAAAAACC
AAGAGCTGTAATATCTCAGGAAGAAACAGAAGATGCCGTGGCTGCGTTGTTAGGTGAAAG
TTTTGGTGGCAAAGAAGACTCTTTTACAGATTGTTTTGATACTACTGAAAATGAAACTTT
ACAAAAAAATGAAGTAAGCCCTGAAATTAATGTCAATGAAAACATCCCAGAAGAAGACGC
AGAAGAAATGAGACAAGCTGTTCAAAATTTAAATGCAAGTGAACTCGAGTCAAAACCAGA
TACTCCTGTTTCTGACAATGACATTTTGTTAATTGACACAGATACTGAAGAAGTTGAGGA
ATCTGTGCAAGATGCGATCGAAAGACTCCCTGTCAATATTATTGCTACATCTTTAAATGT
TTCTGTGGAACCACTTAAAACAGATGAAATATCTAAGATGTCTACACCAGATAAGATTAC
ATCCACTAATGAATTAACACCGAAGAAACCAATCGTGGTAAAAAAAATTGAGTCTGATTT
AAGGGTTAAACCCAAAAAAGACAGCGCAGTGGTAATAACATCAACAGCTACACCGGTTAT
AACATCTTGGGCCTTAAGCAGTAATAAAATGGTTGAGTCTCCGGTTATAAATATAAAAAC
GAGCCCTTTGAATATGAGAGAAAAAGCAGATGGCAAAACAACACATATTACAGCAAATAT
TGTACAGATAAAAACTTCTTCTCCGCAAAATGTGCAAGTGACAAATTCTATTAGACCCTT
GGTTACCCCTGCGAGAGTCAGTGCTCCATACCAAGTTATAAATCATGTACAGCCTCCTAC
TATAAAAATACCTGAGTCACATATATTATATCAGAAATCGCAAGGCATCGTTATTTCGCC
GAGGATGTCATCTGACTCCCATATACAAAATGCGAAAAGCAGTCCATCGGCTGAGGGTTC
ACCTTCTCCTCGAATAGCAAACATGGCAATTCTAAGTACTACACCTAGTTTGAATTCCAC
TGCGATCTCCACCGCCTGTACATTGCAGCAACGACCACCAGGACAAGTTACTGTTGTCCG
AATGCAACAACCGCCGCTGAGTCCGATACAAACCATGCACATTCAACATGGACCGCGAGC
AATCGTGTCACCAAACAGACATAATTCTGTCTTGGTACAAGCACCAGGACACACTGGCCC
TTTTAATAGACAGTCGACACCTATACACGTTACGCCTGTTTTAACACCCATCAGCAAGCA
GGTTAATGTAAATAATTTGATTCAACAAAATAAAAACATAGGTGTAAGTAATACATTACT
GAACACCATAAAAACAATATCTGGAGAGTGTAAGAAAGTTGAACATCATGCAACAGAGAG
CGCAAAAGATACTCCTAAAATTATTTTGTCGCCAACTAATCTACAACAATCCTCAAACCC
AACGATTATGGCGCAGAATCGTTTGATTTCCATGCAAAATGCTGTGCATGTTGGAAATGT
AAATAGCACACTTCACGTAAACAACAAAGTTATAAGGCAACTTCATGACAAACGGGAAAA
TCAAAATCCAGGCTCTGAACCCCTAAGTCATATTACCTTTGGGAATACTCCCATAATACA
TGTTGGCGTTAGTCATCCAGCCACGTCTATCATTCAAAGTAATGTAAAACCAGTTACTTG
TGGTATTCAAGATTCCAGCTCTATCAATCGTGGTTCAGGAACCAATGTCATACACACTGC
GAATCCTCAAAGACTGTTGACACCTGTTTCGTTGAGTGGTGTTCGACAGCTAGAAGTGAA
TAAAGGTCCATCAGTTCTTTCTATGGCATCTCTTAAATCTCCAACAGTATTAGCTAAAGT
TGATTCACCAATATCTAGTACTATTACTAAAGTGTCACCTGTATTAATAAAGACAGTTTC
ATCAGATACTTTTAGATCTGATATACGATTGGAATGCAAAGAAAAACAAACCAAATGCTT
TACTGAAAATAAAATTGAAGAACATGAATTAAGAAATACAGAATTTGCATCAAGAGACTG
TTGCTCTGAAGGTGCTAGTGCAGTGATTGATGAAGCTGAAAATAAATGTGGAACTGATTT
CGAAGAATTGTTGAAAGACAACACGAACGAGATAAAAGTTACAAATGATCCTGAGAAAAA
ACTGGAGATTAATGTTGGAAAAACTGTTACTGTACTGTCAACAAATTTAAACACATTAGA
CAAAATCGATACACAAACTACAGATTTGCCGTTCAACACTGGTGAAACAATCGAACAATC
AACGGTTGAATTTGCATCACAAAAAGTATGCAAAGACATAACAGTATCTGAAGTGGTTAA
TAAGTCTGCCGAGGACCCGAATGGTAAAGAACTTCTTAAATTTGAACCTGAACAATTTGC
GAAAGTCGACTCAGATACCTCAAGTACCAATAAAACTACTACTTTAATAGATGCGACACC
AGAAAATCATGATACCCATGTTGTTTTGTCGAAGAACGAATCTATCTTAGAGTCAGAAAA
TGAAATTAAGACTCCCGATGAAACAGACTCTTGGAGTGCTAAAGATGTCAATATAGAATC
CGTTATTAAGAAGGTAGATTCATTGTGTAATGAAATCAATGAACATGAAACAAAACCGGA
ATTTTTAATAAATAATGAAAATCTAGTCGGCGGTGACGATAAGACAAAAGTAGAAGAGAA
TTTACCAACTCAAACAACTGCAATAGATACATCATCAAGTAACATCAGTCTGTCAGAAAA
TGTGGATGATTCACTTATGGATAAAGGTACATTAAGTAAGAGAGGAGGCAAGAGTTTAAG
GGGCAGGAGAACGGATAAGAAGCAAAACAAAGTACAGACTCGACAAATATCAAAACCAGT
GCGAGGTATTACTACAAAACGTGGGCGAGGCAGAGCAAAGGTTGATAGAAATATTAAAGA
ATTGGTTAAGAATATCTCTAACCCTATGCCCGGAGATGTTTATGACTTTCATGAGGATTC
AGGTGATGAAACTGCCGGGGCTCCTGCTAAAGTGGAAAGTAGACCTAGACTTATTTTAAC
CATCAAAAGTCCTCAATCAGGTCAATGTAATATATTACCGTCGCCTTCGATAACTATTCC
TCCAAGAGAACAACCAAAATCGACTGAAAAAGTTAGTAAGGAAGAAAAAAATGAAGACTT
TATTTCACCTTCCCTTAATACGCGCAAATCTAGAAGACTACAAGAAAAAGATGTTCTCCG
ATGTACTACAGACGATGTGGAAGATTCTTTGAAAACGGAGAACCTGCAACTAAAAAATAA
TAAAAAACGATCAACCCGGCAAAATCTTGTCAAAGTGAGTCAAGATAAAAATATCAGTTC
CGATGTACGTAAATCTCCACGTGGGACAAAGCGGGCTAGGGACCGAAGCTTGTCGGACAC
ATCCACAGAAAGTGGCGACGAAAAGAAAATCAAAAAAGAAGACAATCTGTCCATTGGGCA
GGGTACGCAGCTATCGGGCACGGAAACTGTCAACGACATTCATAATCACGAAATTTCAAA
TCCTGAGAATACAACAGTTTTGTCTGTTATTGCATCTTCTTCATCTGCAACGAAGATTAC
AGTCTCCACTATAACTCCGACACAGGCGCCAACGTTCCCGATCTCCTGCGCGGCGACACC
CAAGTCCGGGTCGGACATTGCGTCAGTTTATCCGGCCGTTCCAACGCCCATTACTAAACC
TCCCAAAAAGATGATATCTGAAATGAGCGCAAAACTGGCTAGCGTCTTCGAAGCTCAGCA
CGAAGCGGAAAGAGGGATAGAGGTACAGGCGGCGCGCGTCCCCGCAGCGGCGGTCCCCAC
GGGCGGCACCGAGGCGCCGGGCGAGGCGCGCGTGCAGTCCCCCGCCCTGCCGCAC
(7495 bp)

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