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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27000_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:3.51 TPM:2.96
ORF EntryO_TrvaMG15509_5prime_partial:A_TrvaMG_comp27000_c0_seq1
Sequence
(Nucleotide)
AGACAGAGAATCAGAATCCTCAATTGATAATTCTACTGATGATGACTCTACTTTTAATAG
GAACCATAGTAAACTTGACCTTTCAGATTTCATTAATAATATTCAGAAAGCAGGTGATTT
TTCAACAGATTCAATCAGTGAAGGAAACTTGTCTAGTAAATTGTCTCGTAAAAATTCTAG
GACTCGCATCATATCTGATTCTTCTGACGATGAAAAATCCAAACGAAGTGTAAGCAAAAG
TCCTATTTTTCGTAATAATGCTAAAAAAGAATCAATATCGGATTCTGATTCTCTGTCTAC
GTATAGAAACGATTTTGATGTCCGTGATCAAATTGATAAGGAAAAAAAGAATACTTTACT
AAACTTATTTGGAAAAAGCGATAGCGATGACAGTAAGATTAAAAATATTTCTGATAGAGA
TAACAATTTTAAATCTTCTGTTATTAAATCGCTCTGTAATGATTTCTCTTCCGAAAACGA
ATCAATAGACCGGCTACAAAATAGAAGTTTTAGTGAAATTCGAAGAAAGCACAAGAAAAA
GCAAAGAAAACATAAAACGGAATCGTCTGATGCTGATTTCAATAAAGAAAAGAACGACTC
TATAGTAAAAGAAACTGACATTGATGCAAAACATAGTGATAAAATTCGACGACACAGTAA
TAAAAAAGAAAAGCGAAAAGAGAAAACCCGCGAAAGTATTGATATCGATGACTTTTTCGA
TGACAAACAAAAAATTAAAAAAGAAAATGTATTACCCTTGAATAACACAAACTCATTTGA
CTGCCCCTCAGAAATAATTCACATTAAAAAGGAGGATAAAATGGAAGACATATTTGGTCC
TTTAACAGATGAATCAGATAAGGAAGATCATCCGTCTAATAAGACAGATTTTATTTCTAA
AGAAAATGTGACTTTCGGAAAAACTGAGGAAAATGATATCATGAATATTGATTTAAAATC
CAAAGATAAAGATGAAACCAAACGTAAACGAGATAAAAAACGTAGCAGGGAAAAACATTT
TATAAAAGAAGACATAATAGTTTAGATGTTGATGCAGTAAGCAAGGCTATAGAAGCTAGA
CTTTTTGCTGATTCTAACGTTGATGATCGTACTAAATCAGTTAAACATCTAAACGTAAAT
AGTGAGGTTAAAGAGGAGACGACTGCTCAAAGTAAAGACCTGACGGAGAAACACGAAAGA
AATAAAAGGGATTATAGAGACAAAAAAAAGAAAAAGAGGCGATGTAAAGATGAACGTATC
AATCGTAAAGATATTTTTCATTCTCAAGACAGTAAAAATGATAATATTGAAAAACATAGT
GTCAGTGATGTTATAACCAGTGATCTGACACCTAAGGTACAAACACCCGAAAACATATTG
AAGATAAATGAAATTTCTAGTGATATTTTTGAAAGCAATCCCTTAATCGAATCTCCGAGT
CTACCGAGATTGACTGATAGCCCACCCAACATAACAAAACCAGAAATTAGCGATACTAAG
GATAACGATGTTATACTTGATTCAGATGCAACCAATACTGAAAGTTTGGAAGAAAAAAAT
ATCGGAAATGAAATCAATTTGGAAATTGTTACAGAGGAATCACTCCAAGAGGTTGGGGAA
GAAGTTTCTTTAGTCCAAATAGAAAATATATCTTGTAAAACAGATAGTCAACATGATAAT
TTCTCAGAAAACTATAGTTCCGAGGCTAGTGATGCCGTTCGTAGTATACCGTGTTTAGAA
AATGATACAGAAAAAGCAACAGACATTTGCTCAGAAATGAACGATCTTAGTAAAAAAGTT
GACGAAAAACCAAGAGCTGTAATATCTCAGGAAGAAACAGAAGATGCCGTGGCTGCGTTG
TTAGGTGAAAGTTTTGGTGGCAAAGAAGACTCTTTTACAGATTGTTTTGATACTACTGAA
AATGAAACTTTACAAAAAAATGAAGTAAGCCCTGAAATTAATGTCAATGAAAACATCCCA
GAAGAAGACGCAGAAGAAATGAGACAAGCTGTTCAAAATTTAAATGCAAGTGAACTCGAG
TCAAAACCAGATACTCCTGTTTCTGACAATGACATTTTGTTAATTGACACAGATACTGAA
GAAGTTGAGGAATCTGTGCAAGATGCGATCGAAAGACTCCCTGTCAATATTATTGCTACA
TCTTTAAATGTTTCTGTGGAACCACTTAAAACAGATGAAATATCTAAGATGTCTACACCA
GATAAGATTACATCCACTAATGAATTAACACCGAAGAAACCAATCGTGGTAAAAAAAATT
GAGTCTGATTTAAGGGTTAAACCCAAAAAAGACAGCGCAGTGGTAATAACATCAACAGCT
ACACCGGTTATAACATCTTGGGCCTTAAGCAGTAATAAAATGGTTGAGTCTCCGGTTATA
AATATAAAAACGAGCCCTTTGAATATGAGAGAAAAAGCAGATGGCAAAACAACACATATT
ACAGCAAATATTGTACAGATAAAAACTTCTTCTCCGCAAAATGTGCAAGTGACAAATTCT
ATTAGACCCTTGGTTACCCCTGCGAGAGTCAGTGCTCCATACCAAGTTATAAATCATGTA
CAGCCTCCTACTATAAAAATACCTGAGTCACATATATTATATCAGAAATCGCAAGGCATC
GTTATTTCGCCGAGGATGTCATCTGACTCCCATATACAAAATGCGAAAAGCAGTCCATCG
GCTGAGGGTTCACCTTCTCCTCGAATAGCAAACATGGCAATTCTAAGTACTACACCTAGT
TTGAATTCCACTGCGATCTCCACCGCCTGTACATTGCAGCAACGACCACCAGGACAAGTT
ACTGTTGTCCGAATGCAACAACCGCCGCTGAGTCCGATACAAACCATGCACATTCAACAT
GGACCGCGAGCAATCGTGTCACCAAACAGACATAATTCTGTCTTGGTACAAGCACCAGGA
CACACTGGCCCTTTTAATAGACAGTCGACACCTATACACGTTACGCCTGTTTTAACACCC
ATCAGCAAGCAGGTTAATGTAAATAATTTGATTCAACAAAATAAAAACATAGGTGTAAGT
AATACATTACTGAACACCATAAAAACAATATCTGGAGAGTGTAAGAAAGTTGAACATCAT
GCAACAGAGAGCGCAAAAGATACTCCTAAAATTATTTTGTCGCCAACTAATCTACAACAA
TCCTCAAACCCAACGATTATGGCGCAGAATCGTTTGATTTCCATGCAAAATGCTGTGCAT
GTTGGAAATGTAAATAGCACACTTCACGTAAACAACAAAGTTATAAGGCAACTTCATGAC
AAACGGGAAAATCAAAATCCAGGCTCTGAACCCCTAAGTCATATTACCTTTGGGAATACT
CCCATAATACATGTTGGCGTTAGTCATCCAGCCACGTCTATCATTCAAAGTAATGTAAAA
CCAGTTACTTGTGGTATTCAAGATTCCAGCTCTATCAATCGTGGTTCAGGAACCAATGTC
ATACACACTGCGAATCCTCAAAGACTGTTGACACCTGTTTCGTTGAGTGGTGTTCGACAG
CTAGAAGTGAATAAAGGTCCATCAGTTCTTTCTATGGCATCTCTTAAATCTCCAACAGTA
TTAGCTAAAGTTGATTCACCAATATCTAGTACTATTACTAAAGTGTCACCTGTATTAATA
AAGACAGTTTCATCAGATACTTTTAGATCTGATATACGATTGGAATGCAAAGAAAAACAA
ACCAAATGCTTTACTGAAAATAAAATTGAAGAACATGAATTAAGAAATACAGAATTTGCA
TCAAGAGACTGTTGCTCTGAAGGTGCTAGTGCAGTGATTGATGAAGCTGAAAATAAATGT
GGAACTGATTTCGAAGAATTGTTGAAAGACAACACGAACGAGATAAAAGTTACAAATGAT
CCTGAGAAAAAACTGGAGATTAATGTTGGAAAAACTGTTACTGTACTGTCAACAAATTTA
AACACATTAGACAAAATCGATACACAAACTACAGATTTGCCGTTCAACACTGGTGAAACA
ATCGAACAATCAACGGTTGAATTTGCATCACAAAAAGTATGCAAAGACATAACAGTATCT
GAAGTGGTTAATAAGTCTGCCGAGGACCCGAATGGTAAAGAACTTCTTAAATTTGAACCT
GAACAATTTGCGAAAGTCGACTCAGATACCTCAAGTACCAATAAAACTACTACTTTAATA
GATGCGACACCAGAAAATCATGATACCCATGTTGTTTTGTCGAAGAACGAATCTATCTTA
GAGTCAGAAAATGAAATTAAGACTCCCGATGAAACAGACTCTTGGAGTGCTAAAGATGTC
AATATAGAATCCGTTATTAAGAAGGTAGATTCATTGTGTAATGAAATCAATGAACATGAA
ACAAAACCGGAATTTTTAATAAATAATGAAAATCTAGTCGGCGGTGACGATAAGACAAAA
GTAGAAGAGAATTTACCAACTCAAACAACTGCAATAGATACATCATCAAGTAACATCAGT
CTGTCAGAAAATGTGGATGATTCACTTATGGATAAAGGTACATTAAGTAAGAGAGGAGGC
AAGAGTTTAAGGGGCAGGAGAACGGATAAGAAGCAAAACAAAGTACAGACTCGACAAATA
TCAAAACCAGTGCGAGGTATTACTACAAAACGTGGGCGAGGCAGAGCAAAGGTTGATAGA
AATATTAAAGAATTGGTTAAGAATATCTCTAACCCTATGCCCGGAGATGTTTATGACTTT
CATGAGGATTCAGGTGATGAAACTGCCGGGGCTCCTGCTAAAGTGGAAAGTAGACCTAGA
CTTATTTTAACCATCAAAAGTCCTCAATCAGGTCAATGTAATATATTACCGTCGCCTTCG
ATAACTATTCCTCCAAGAGAACAACCAAAATCGACTGAAAAAGTTAGTAAGGAAGAAAAA
AATGAAGACTTTATTTCACCTTCCCTTAATACGCGCAAATCTAGAAGACTACAAGAAAAA
GATGTTCTCCGATGTACTACAGACGATGTGGAAGATTCTTTGAAAACGGAGAACCTGCAA
CTAAAAAATAATAAAAAACGATCAACCCGGCAAAATCTTGTCAAAGTGAGTCAAGATAAA
AATATCAGTTCCGATGTACGTAAATCTCCACGTGGGACAAAGCGGGCTAGGGACCGAAGC
TTGTCGGACACATCCACAGAAAGTGGCGACGAAAAGAAAATCAAAAAAGAAGACAATCTG
TCCATTGGGCAGGGTACGCAGCTATCGGGCACGGAAACTGTCAACGACATTCATAATCAC
GAAATTTCAAATCCTGAGAATACAACAGTTTTGTCTGTTATTGCATCTTCTTCATCTGCA
ACGAAGATTACAGTCTCCACTATAACTCCGACACAGGCGCCAACGTTCCCGATCTCCTGC
GCGGCGACACCCAAGTCCGGGTCGGACATTGCGTCAGTTTATCCGGCCGTTCCAACGCCC
ATTACTAAACCTCCCAAAAAGATGATATCTGAAATGAGCGCAAAACTGGCTAGCGTCTTC
GAAGCTCAGCACGAAGCGGAAAGAGGGATAGAGGTACAGGCGGCGCGCGTCCCCGCAGCG
GCGGTCCCCACGGGCGGCACCGAGGCGCCGGGCGAGGCGCGCGTGCAGTCCCCCGCCCTG
CCGCAC
(5646 bp)

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