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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26999_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_SPF27_[Papilio_polytes]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.90 TPM:0.76
ORF EntryO_TrvaMG15502_complete:A_TrvaMG_comp26999_c0_seq5
Sequence
(Nucleotide)
TTTTTTTAAGCTTTTAACTATATTTATTCTTATTTTTTAATCTGCAAACATATCTTCTAT
TTTCTTCTGCACCTCCTTTTCCGTTTGTGAGTTGAGTTTCTCTGGTAATGATTTGACAAT
GTCCAAGTCTGCTTCCTCTCCTTCCTCAATGGATACTTCTCCTTTAGCCTTTTGCAAATG
TAATAGCGCTCTCTCAAGCCTGTAGTTATCTGACACAAGTTGCGCCCACCGTCGCCGCAA
TGAACGAAGTCGGGCTCCGCTCGCCGTCTGCACGCGTTTACGCTCCCAATTAACTGATCC
TATCTGTTTTCTTAACTGATTGTGTTCATTTTGTGCCTTAGCTACTAAAGACTGTAACGT
GTTGAGATATGATCTCCAGGCTTCCGAACCGTACTCCAGCTGCAACTCCAAGTTGAGGAC
CCTGATGGCTTGATGGGAGAGCTGGGCGTGGGAATTGTCTACCGATTCTGCCCATGCGCT
GGGCTCACTCATTTTGCCTACAGGAGGAGGTGGAAGTTCATACCTCTTCATAGATAAAGG
TTCCATCGGTAATCTCTGTTGAACCCTCTCCATTTCTCGTTGTAATGCTGGAGTTTCGAA
TGCTGTACTGGGTTCAGGTCCTGCATTCTCTAAATAGTTCTTAGTAGGTCTGTATCGCCT
GCATTCTTCTTCTACCATAGCCAGTGCAGCTTCCCTGACTCCAGGATCATCGTAACCCTG
ATCTATGTACGGCAGAGCATCTACGACAACTTCTCCGGCCATTTTTCACAAATAATCTTA
TTAATCTTCAATAAACGCAGCTATTTTGTTAATTTTATCATGAAAATATCACTTCACTTC
ACTTCACTTTATTTATGGCGCTCTGCCGTCAGTAAAAATATCAAAATAATGCGAAATTAT
AATCAAAACACTTCACTGGAGACAATTGAGACAAACAAACGAAACACAAGATTGACAATT
GGTGACACTGACAGTGAAAGTTCTGCAAGAAACATGGTCTGTCAATATCAAATTTAATAT
GTCAGATGTCATCAAAACCAAAACAAAGTTTCAGCTTGTTGAGCTGATTTATTTTATTTT
CAAAATCATTAATTTCTAGTTTTAGTTTCATAGTTATTTAGGATCCGCGGAGTTATATTG
TAGTTTTAAGTTGAAATTCTGCAAGAAAATGTTTTATGTTTAATAAGTTTTTATCGAAAT
AAACAAAGATGAATCTCCACGAAGATTTGCCTAATCCTGGATCCTCAGAGGTTGATTTAT
CAAAGGTTTGATTAAACTTTTTGAAGTTTTTACAATTTAAATCCAATTTAGAACATTCAT
TAACATTATGAGAATTCTAACTTAACGATTTTACTTTGTAGGTAGCTGCATTACACCAAA
AACGAACATTGGCTTTCGTAAATCATTTCCTTACTATAAATGTACAATTCTTGAACACTT
TCATGAAAAATTGCGAGCAGAAGTTAATGGAATTTGAAAGGAAACTGGAAAAAGTGAATG
CTGCTATGGTTTTACTAGAATCTAAGCTCTCATCAATACCCGAATT
(1546 bp)

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