SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26999_c0_seq10
Scaffold_id
NCBI non-redundant
(nr)		splicesome_protein_[Antheraea_yamamai]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.48 TPM:0.40
ORF EntryO_TrvaMG15505_complete:A_TrvaMG_comp26999_c0_seq10
Sequence
(Nucleotide)
ATTCTAAAAGAAAATTTTAAGCTTTTAGGCAATAGTGAATGGGCCTCTACAATAATGAAC
TTTTTAAGCAGTTAAAGCAAACGGTTCACATTATAAAGGCTACTATTATAAACCTCACCT
TAACTGATTGTGTTCATTTTGTGCCTTAGCTACTAAAGACTGTAACGTGTTGAGATATGA
TCTCCAGGCTTCCGAACCGTACTCCAGCTGCAACTCCAAGTTGAGGACCCTGATGGCTTG
ATGGGAGAGCTGGGCGTGGGAATTGTCTACCGATTCTGCCCATGCGCTGGGCTCACTCAT
TTTGCCTACAGGAGGAGGTGGAAGTTCATACCTCTTCATAGATAAAGGTTCCATCGGTAA
TCTCTGTTGAACCCTCTCCATTTCTCGTTGTAATGCTGGAGTTTCGAATGCTGTACTGGG
TTCAGGTCCTGCATTCTCTAAATAGTTCTTAGTAGGTCTGTATCGCCTGCATTCTTCTTC
TACCATAGCCAGTGCAGCTTCCCTGACTCCAGGATCATCGTAACCCTGATCTATGTACGG
CAGAGCATCTACGACAACTTCTCCGGCCATTTTTCACAAATAATCTTATTAATCTTCAAT
AAACGCAGCTATTTTGTTAATTTTATCATGAAAATATCACTTCACTTCACTTCACTTTAT
TTATGGCGCTCTGCCGTCAGTAAAAATATCAAAATAATGCGAAATTATAATCAAAACACT
TCACTGGAGACAATTGAGACAAACAAACGAAACACAAGATTGACAATTGGTGACACTGAC
AGTGAAAGTTCTGCAAGAAACATGGTCTGTCAATATCAAATTTAATATGTCAGATGTCAT
CAAAACCAAAACAAAGTTTCAGCTTGTTGAGCTGATTTATTTTATTTTCAAAATCATTAA
TTTCTAGTTTTAGTTTCATAGTTATTTAGGATCCGCGGAGTTATATTGTAGTTTTAAGTT
GAAATTCTGCAAGAAAATGTTTTATGTTTAATAAGTTTTTATCGAAATAAACAAAGATGA
ATCTCCACGAAGATTTGCCTAATCCTGGATCCTCAGAGGTTGATTTATCAAAGGTTTGAT
TAAACTTTTTGAAGTTTTTACAATTTAAATCCAATTTAGAACATTCATTAACATTATGAG
AATTCTAACTTAACGATTTTACTTTGTAGGTAGCTGCATTACACCAAAAACGAACATTGG
CTTTCGTAAATCATTTCCTTACTATAAATGTACAATTCTTGAACACTTTCATGAAAAATT
GCGAGCAGAAGTTAATGGAATTTGAAAGGAAACTGGAAAAAGTGAATGCTGCTATGGTTT
TACTAGAATCTAAGCTCTCATCAATACCCGAATT
(1354 bp)

- SilkBase 1999-2023 -