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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26998_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_spectrin_beta_chain,_non-erythrocytic_1_[Amyelois_transitella]
Ontology
GO:0000165 P MAPK cascade
GO:0002046 F opsin binding
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007030 P Golgi organization
GO:0007041 P lysosomal transport
GO:0007411 P axon guidance
GO:0008022 F protein C-terminus binding
GO:0008091 C spectrin
GO:0016020 C membrane
GO:0019894 F kinesin binding
GO:0030036 P actin cytoskeleton organization
GO:0030507 F spectrin binding
GO:0030863 C cortical cytoskeleton
GO:0032029 F myosin tail binding
GO:0032391 C photoreceptor connecting cilium
GO:0034452 F dynactin binding
GO:0043547 P positive regulation of GTPase activity
GO:0043621 F protein self-association
GO:0045179 C apical cortex
GO:0045505 F dynein intermediate chain binding
GO:0046982 F protein heterodimerization activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:0097381 C photoreceptor disc membrane
Transcript
Level		FPKM:2.10 TPM:1.77
ORF EntryO_TrvaMG15474_complete:A_TrvaMG_comp26998_c0_seq4
Sequence
(Nucleotide)
TTGGGTTCGGACGTGTTGTTAAAATAGTGATAATTTCTCTTAATATTATCACTGTTAGGA
TGTGTAGTGATTATAGTGTGAAGTGTTAGTGCCTTGCGGTTTGGAAAAGTGTTAAAGTGA
TACATAATAATTTAAATGACAGTGTGACCAACATAACTAATGTGTGAAAATGCAGAGACA
ATTAAGCAACGTCAGTTTTCATTCTTATCAGGACTACCAACCTAGCAGGCGATATGGGCC
CCAGTATGAACCGGGGGGCTACGCAGCGGTAGTACAACAGCGAACCAACATGACTCAAAG
GGAAGACGCCCTGAAGTTCGAACAGGGCCGGATCAAGGCTCTGCAAGAAGAACGATTGCA
TATCCAGAAGAAGACTTTTACGAAATGGATCAATTCGTTCTTGCAGAAGGCCCGAATGGA
GGTGGACGATCTATTCGTGGACCTCGCAGATGGAAGGAGACTCCTTAAACTCCTGGAGAT
TATCAGCGGTGAACGTCTACCTCGTCCTAACACCGGTAGAATGAGGGTACACAAGATTGA
GAATGTGAACAAGAGTTTAAGCTTCTTGCATACTAAGGTCCGTTTGGAGTCCATCGGGGC
TGAAGACATCGTGGATGGTAACCCAAGGTTGATCCTTGGTCTTATCTGGACTATCATTCT
TCGCTTCCAAATCCAGGAGATTGAAATTGATGTGGACGAAGAAAATGAATCATCAGAGAA
GAAATCTGCTAAAGATGCGTTGTTACTCTGGTGTCAACGGAAGACCAGTGGCTACCACGG
AGTACACATCCACAACTTCACTGATTCCTGGAGATCAGGACTTGGGTTCAACGCTCTTAT
TCACGCCCATAGGCCGGATCTATTTCGCTGGAACGAGGTACCAGTGGCTGATCACGTGGA
AACCCTCAACCACGCCTTTGACGTCGCTCACAAACACCTCGGCATACCGAAACTGCTTGA
TGCTGAAGATGTGGATACAACCCGTCCTGATGAGAAGTCCGTCATGACGTATGTCGCGAG
CTACTACCACACGTTCGCTCGAATGAAGAATGAACAGAAAAGCGGCAGGAGAATCGCTAA
TATAATCGGTCAAATGATGGACTGCGATGACCGTAAAGGGGAATACAGTAAACTGATGAC
AGCTCTCCTCGAGTGGATCCGAATGAAAATTGAAGAATTGAATGACAGAGAACTTCCCAA
TTCTTTAGACGGAATTCAAAGACTTTTACTCGCTTTCAAACAGTATAGGACTGTTGAAAA
ACCACCCAAATACAAAGAACGCTCGGAGATCGAAGCCTTATATTTCCACATCAACACCAT
GCAGAAGAGTCTCGTGGGGGAACCCTGGGCTCCTCTGGACGGCCAGCTTCCTCAGGACCT
GGAGAGGGCCTGGCAGAGACTTGAACAGGCGGAGCACGCGAGAGAGATAGCGCTAAGAAC
AGAATTGCTTCGACAACAGAGATTGGAACAACTCAACTATAAATTCAATACCAAGTCTGT
CCTCCGTAAAGGATATCTCAAAGAAATGATCCAGGTGTTGTCAGATCCTCGCTACGGATC
AAACATAGCGCAAGTTGACGCGACTGTGAAAAAACATGAAGCTATCTCAGCGGATATCTT
GGCTAGAACCGAACGCTTCGAAGACCTATCAGCAATGGCCGCTGAGTTAGTGAAAGAGCG
CTACCACGGCGCCGAAGCGGTATCTCGAACAGAACAGGCCGTGTTACAACGATGGAGGGA
GCTCCTAGACTTGTTGGAGAGACATCGCGTGTCGCTGGGCAAGTTGGCGAGGCTGATGGC
GTTGCTTCGGGAGGCGGATGCTGTACATCATACTTTATTGGAGATGAAGGCCCAATTCCA
ATCTGAAGAAGTAGGTCGTCACCTCTCCGACGTGGAGCGATTGTTACAAGCACACGCCTT
ACAAGAACTTCAACTTGGTGCCGCTGACGAGAGCCTGAAGAGACTGGTCCGGCTCGCTGG
TGGGGTTGATGGTCCACCACAACCTCAGGCGCAGTTGGACAAGCAGTTGGAGCAATTACA
GGAGGGATATGATAGTTTACTAGCTGCCGCTAAGGATCGTAAAGCGAGATTGGAAGACGC
TCGTAATCTCTACCAGTTCTTAGAAGATCATGATGAAGAAGAAGGCTGGGTAACTGAAAA
ACAGCGTATATGCCGCGCCGATGTCGCTGCTAAGGACTTGAGAGGAGTCCTAGCTTTGAA
ACAGAAGCACACAGCGTTGATGCATGAGCTGAGGGCCAGGGAACACGTGTCACAACGGCA
CAGGGCTAAGGGACAAAGTTTGATAGACGCTGGTCATCCGAAAAGCGCTGAGATCGACCG
TCGTCTTACATCGTTGAATAAACAGTGGGAAACTCTGAGGGAACTCGCGGCTGCCAGAGA
AAAACAATTGGCTGATGCCGCTGAAGCACATCAGTTCTACGGCGACGCCAACGAAGCCGA
ATCCTGGATGAAAGAGAAGCGTCCCCTCGTGAGCACCGCGGACTGTGGTCAAGACGCAGC
CGGCGCCGCCGCCTTGCTAGCCAGGCATAGAGCATTACATGACGCTATTAGAGCCCATAG
CGCGGAGTTAGAGACCTTGGCGACGCATGCGGGGAGATTACAGCAAGCGGGGATACAGAG
CTTACAGTTGCCCACAGAAGTGGAGTCCACCCAGGGTATGGAGGATGAGGAATGGGTGAA
CGAGTCCAGGCTGGTACCGACTGAGGTCTGGGAAGAAGAACCAGTGGAAAGATTGGAACA
TAGAACAGTTACTGAAGAGAGACAGGTTCCACAAGTTAAAGCGCTATACCCATTCACGGG
ACAAGGTATATCCATGCAAAAAGGCGAGATAATGTTCCTAATAAACAAAACTAACCCGGA
CTGGTGGTCGGTTCGCAAAGCAGACAGAACTGACGGCTTCGTTCCCGCCAATTACGTGAG
GGAAATCGAGCCGAGGGTCGTGCCGGTCCAAGTAAGAAGAGCAGAAAAAGTTAAAACCGT
TCAGCGCGTCAAGAAAACTGTGTTAGTTAAACAAGTTGTTCCAGTGAAAAGAAATAAACC
TACTGCGAGAAGAACTTCGAAAGTACAGCAGAAAGTTGTCACTGTCGCTACCAGGATGGC
AGACATACAAAGAGATTACGATGAATTGGTGGCGCTATCTTCTGCGAGACGAGAACAGTT
GGAAGATGCTATAAAACTATACAGCTTCTTCGCCGAATGCGATGATTTCGACAAATGGAT
GAAAGACAAAGAAAAACTGCTGAAGTCTGATGATGGAGAGGAAAGCGTAGATACTGCTAA
GAGAAAATACGAGAAATTCGTAACAGACCTATCAGCAGCCTCCAAACGCCTGGAACACAT
AGACTCTGCTGCTGAAGAGTTGGTGGCCACTCAACACGGGCAGGCTGGCAAGGCGGTGGC
CAGGAGACAACAGTTACGACAGCAATGGGACAGGCTGTTGAGGCTGAAGCAGCAGAAGGA
AAAGAGTTTAGAGGGGGCTTCTAGCGTGGAACTCTTCAGCCGTACCTGTGACGAAGCCCT
GGAGTGGATGGCTGAGAAGGAGCAGCAGTTAGCAGCAGGTCCTGGTGCAGCATCAGACCT
GAGGACGGTCCAGGCTCTGCAGAGGAGACACGCGCAGTTGGAGAGAGATTTACAACCGCT
GAAGGATAAAGTCGCTACTGTCAGCTTGTTGGCTGATTCAGTAAAATCCCAATACCCAAG
CGAGCGCGCCAACGTGGAGGCGCGTCAGAAGGAGCTCCAACGTGTATGGGAGCGATGCCG
GCAGCAGGCCGACGAGAGAAGAGATCGGTTGGAGAGCGCGGTCGGACATCAGATATTTGG
AAACAGCAGCGCTCAGTTACAAGGGTGGTTACAGAAAACGAGGGAGCAACTAGCCCAGGA
GGCAACAGCGAAAGACGTCGCGACGGCGGAAGCGTTACACGAACAACATCAGGAGTTACT
CGATGATATCAAAACACATAATGATGAGTTCAAAGAAGTCATAGCTCTCGGTAAACAGTT
ACTGGCTAAGAACCCAGCTTTAACCGATGTTGCTGATAAAATAAAGCAATTAGAACAAGA
TCAGAAGGCAGTCGCTAAAGAATGGCAAGAGAAAGATGCTTATTTGAAGCAGTTAGTACA
ACTCCAGTGCTTCAATCGTGAAGCTGATCAGATAGATGCCTCATCCGGTGCACATGAAGC
TTACTTAGATTACACACAATTTGGATCGTCAGTGGACGAGGCCGAAGCCCTAGTGAAGCG
TCACGACGAGCTGGAGGCTCGCGTGGCGGCCCAGGATGACAGACTGCAGGGCTTCGTGCA
GAGGGCGCAGGGCTTGATCGCCATACCGCACTACGCTAAGGACCACATAGTGTCACGGCG
TGACGGCGTGTTGTCGCGGCGTGACGCGGTACGCGTGGTAGCGGCTGATCGACGCCGAGC
TCTGCACGCGAGCCTCGCTTACCAACAGTTCGTGGCCGCCGTTGAAGAATTACAGGCTTG
GATTCAAGATAAAACGAGAACAGCTAAAGATCAGAGTTATAGAGATCTCGCAAATTTGGA
GCGAAAACTGCAGAAACACGAAGCTTTCGAACGAGAGTTGCAAGCGAACGAGAAACAATT
GAGAAATGTTGAAAGCATCGGTCAATCTCTCCAGAAGTCGGACCCTGCTCGCGCTGATGA
TGTCAGCTCCCGCTTGGAGTCCCTCAGGGCGGCGTGGGAGGCGCTGGTGGCCGCCTCCCG
GGACAAGGGGGGGAAGCTGAGGCAGGCGGCGCAGCAGAGACAACATCGCCGGTCCATCGA
AGACGCCAGGGCCAGATTGACTGATTTGGAAAGAGCGCTGAAGAGCGAAGAGATTGGCAC
AGATCTCAGGAGTTGTAAGAGATTGCTAAATCAACATCAGGCCTTAGAACAAGAATTAAA
CCAATGGGAGCAAAAAGCGACTGTTTTATCAGCACAAGGGGCCGACTTAGTGTCAGCCGG
GCACTTCGACGGCGTGTCCATTGAACGAGATAGTGCTGCCTTACTTCAAGCTGTGAAAGC
CCTACAGCCTCCCGCTGATGAGAGAAGAAAAGCTTTGAATAGAAGCTTACTCCACCACAA
ATTCGCAGCAGAAGTAGCCGGAGAACTAGACTGGTTGTCAGAGAGGAAAGCTGCTGCATC
ATCAGAAGCTCTGCCATCAGATCTTCACGCTGCCCAAACTGCTCAGAAGAAACACGGCAA
GTTGCGCGCTGAGCTGACCGGCAGACGACCTGTCATCGAGAGGGTGGTGGAACAGGGACG
AGGTCTGGTTGAAGATGGACATCCTCAGAAGAAGAAGATCCTCTCCCTCTGCGAAGAGTT
AGAGTCCTCGTACTCCGCGGTATCAGCAGCGGCCGACGCGCGCGCCTCTCGCCTGGAGGC
CGCTCTCCGAGCCCAGCAGTTCCTCCACGAGGCCAGGGAGGTGGACTCCTGGCTCGCTGA
CAAGGCGACAGCTCTGTCTACTGATGACGTGGGCAGTGACAGGCATAGGGCCACTCAGCT
GTTGACGAGGCATAAGGCCGTAGAACTAGAACTAGACACGTACGCAGCGATAATATCGGA
GATGGGCCACGTGGCGACATCGATGTCGAGCTCCGGTCACCCGGAGGGCGAGACCCTGGT
GTCGCGACACGGCGCGCTGTCCGACACCCTGGGCCGGCTGCAGAGACTGGCCGCGCATAG
ACAACACGCGCTTGTCGAGAGCGTTTGCAGACACGAATATTTGGCTGAGAGTGAAGAATT
AGAACTATGGATCCAGGAGCAATACGCCGCAGCATCCAGCGAAGATTACGGACAAGACTA
CGAACATCTATTGATTTTAAGGTCTAAATTCGACGAGCTTCGTCATCGTGTTGAAAGTGG
CGCTGAAAGATTTAACCAATGCGAAGAATTGGCGAAGAAACTACTCGCTTCAGAGAGTCC
TTATATTGAAGATATTGAAAAAAGACAAGAGGCTCTTGGCGAATCCTGGCAACGTCTCGT
CGACCAAATCCAATCCCGAGGATCTCGTCTGCACGCAGCCGGCGAGATCCACCGCTTCCA
CCGAGATGTCGGAGAGCTGATCTCCAGAACCAATGAGAAGAGAACAGCTTTAGGAGGAAA
ACCAGCCCCGAGGGACTTGAGAGCTGCCAATGCTTTACTACGAGACCATGAGACTCTAAG
AAATGACTTGTTGGCCGTCGACGCTCAGATGCAGGTGCTCCAAGAGGAAGGTAGTCGCCT
CCAGAAGTTGTATCCTGGTGGAAATGTGGTGCAGATTGGTCTCCAGCAGAAGGCCTTGGC
TGAAGCTTGGGAGATGCTGAAGCAAGCTGCAGATGAGAGAAAACACGTATTGCTCCAACA
TCTGCAATTACATCAATTCTTGACGCAGGTCCGTGATCTAACGTCGTGGTCGTCGAGCGT
GGCGAGTACCCTCTCTGGTTCGGTTCGTGTCCGCGACGCCGTGACGGCGCAGAGCGCGCG
CGCCGAGCACCACGCGTTACGCGCCGAACTCGACGCTCGCGACGACACGTTCGCGAGCGT
GTTACACCTCGGACAGAGTCTGTTGGCTGACAACCATCCGAATAGCGCGGAAATAGAAGA
AAAATGCGAAGCCCTAATCGAAGAAAGAGCTAGATTAGAACGAGCCTGGGCCGCCAGACA
AGTCGCCTTAGATCAACTCATAGACTTGCACTGTTTCTTACGAGACGCCAAACAATTGCA
CGACTTGTGTGCCGCGCAGGAAGCTTCATTGAGCATTGAAATATCTCCTACAAGCAGTGT
TGAAGAGGTTGATAATCAATTGAAGAAACACGAGGCTTTTGAGAAACTAATCGCGACTCA
AGATGAAAAGCTGGCAACATTGAACAGTCATGGCGACAAGCTGTTACAGCAGAATCACGT
GGAAAGCCAACGAATAGCCGATGAACTGCAACTTATTAACGAACGAAGGAAAACGCTGTA
CGTGACAGCCGCAGCGCGTCGGGCCGCATTGATCCGCACTCGAGCTCGAGCACAGTTCGC
GAGGGATGCGGCTGAGACTACCACGTGGGTCGCAGACAAACTAGCCAAGCTCGCAGCCGA
CCAACAACACGGAGAAGTCACAAACCTCGAAGACAAGATCAAGAAGCTACAGAAACACCA
GGCCTTCACCGCTGAGCTTGCCGCTAACAAGGCCAGGCTTCAGGAAGTGGAGGCATTAGC
CCAGCAGCTGAGTCCTGATGCTGAGGTGGAAAAGCAGTTAGGAGACCTAAGGAAAGATTG
GGAGAGGCTGGAGCAAGCTACTAGAGAGACTGGTCGTGGTCTAGAAGAAGCTCAAGATAT
ATTAGAATTTAATCAACATCTTGATAAATTCGAGGCCTGGATTAGAGACAAGGAAATGAT
GGTGCAAGCCCACGAGTTAGGTCGTGATTACGAGCATTGTAGCGCTTTACTAAGGAAACT
GGATGACGTGGACAGCGATATGAAAGTAGACGATAAACGAGTAAAGAGCGTCTGCGCTTT
GGCTGATAAATTGTTGAAACAGGGTCCGACCCAGCAAGCAGCCTCAGTGTCATCTCGTCG
GGCCGCATTCCTCGCGAAGTGGTCGGCCCTCAGCGGAGCCCTACAGAGGTACCGGGACAA
CCTCGCCGCTGCACTGGAGATACACTCTTTTAACAGAGACGTAGAAGACACTGCCGAACG
TATTTCAAAGAAGGCAGCCATATTTAGCAGCACTGAACGGGGAAGAGAACTCAGCGCTGC
TCAAGAACTCAAGAGAAAACATCTAGCAAGAGCAGCAGAAGCAACCGCCGTGTTAGACAA
GATACACTCCCTTGAGGAGGAGGGAACTACCCTCGCTAACAAACATCCCGAGCACGCAAA
GGAAATTGAGAAGAGCCTCCGTAGTTTACGTGAGAAATGGGACAATCTTCAACAGTTGGC
TGAAAAACGGACCGCCTTACTTGATTCAGCCATTAATGAACACAAGTTCGATGAAAATCT
AAAGGAATTGGAGCTATGGGTGTCAGAGGCAGTTAAGCAGATGGATGAAGTCGAGGATCC
GGAGACCACGACAGATGCTCAAGCGTTACTCGAACTACACGACGAAAAGAAGGCCGAAAT
TGACAACCGTCAGAAAGCCATATCTGGCTTGAAGAAAGAAGCTGAACAGACTCCGGAGAA
ACTGAAGAAGGTTGAACTGCTTTCCACCACCCTCGACCAGGCCTGGGTTAAGAGGAAAGA
TAACTTGTCTCAGGCTCACCAGCTGCAGTTGTTGAAAGAACAGACACGTCAAGTAGAAGA
TTGGCTCGCTACGAAGGAAGCATTCTTAAATAACGACGATTTAGGAGAAAATAGAGATGC
CGTGGAAGCCCTAATCCGCAAACACGCTGAGTTCAGCAAACTCCTCGAGAGTCAGATATG
TCGTGTTGAGGAACTAAAGAAGAGTGCTGAAGGCATCCAGGGTCATCCGCTGAGGGCCAG
GGTCGATGATGTCATGAGGAGGGCTGGCAGATTGAAGGAATCGTGTAAATCCCGCGGTGA
GATGCTGCAACAATCTCGACAGTTACATCAGTTCTTACAAGACCTACAACACGAGAGGGA
ATGGATCGCTCTCAAGATGCAGATAGCTAATGACCAGAACTATAGGGAGCTATCAAATCT
TCAGTCTAAGATCCAGAGACACACCGCGTTTGAATCAGAGTTAGCCGCTAACAAAGGAAG
GATTGATGATGTCGCGAACCATGGAGAAACATTAATAGAAGCGAAACACTACGCGTCTCA
AGAAATAGCGAAACATGTTGAAGAATTAGAAAATCAATGGCAGGAATTACAGAGCGCCGT
AAAACTCCGTCACGATCGTCTCCAAGAGGCGTATCAGGCTCGGATCTTCTTCCGAGGACT
TGATGACTTCACCACCTGGCTGGATGAGGTGGAAGCTCAACTGCTCAGCGAAGATCATGG
CAAAGATCTAGCATCAGTAACAGTATTACTGAAACGTCATACGCGCCTCGAACAACAAGT
GTCGAGCAAGGCCGACACGGCGACACAGTTGGCCGACACCGCGCGACAACTGGCCGACAG
CAAACACTTCATGGCGCACGAGATCCTAGACAGAGCTGAGCAGGCTGTTAAACGATACCG
TCAACTCCAAGAGCCAATGCAGATAAGAAGAGATAATTTGGAAGATGCTGAATTACTCCA
CCGTTGGGATAGAGACGCAGACGAAGAATTCGTTTGGTTACAAGACAGAGAGCCTATTGT
GCGTCAAGAGAAAACGGGCGATACGTTGCCTGAAGCGCAAGCGTTGTTGAAGAAACATTT
AACACTCGAAGCTGAACTCATTGCAAGAGAGCCGTCAGTAAGCGCCGTGTGTAGTCGAGC
GACACAACTCGTAAGACGGGGTCACTTCGCGTCAAGTGAGCTGGAGGCTAGGTCCAGGGA
GCTGACGATGCTGATGCAGGCTTTGGTACACTCTGCTAGTGTTAGATCAGCAGCCTTGCA
GAGGAGGTGCGATGTTTTGATGCTAGTATCAGAGGTATCAGAAGCCCGCGCCTGGTTATC
GACTCGTCGTTCGTTAGTGTCGGGCGGGGGCGACGCCCGGGATGAGGGCGAAGCCCGAGC
GCTCACACGACGGTTACACACCGCACTGGCAGACCTGGCCGCATTCGACGCTACGCTCAA
TAAGCTGTATAAGAGTTGTGAAGCTTTGCAGGAGCGAGGAGCAAGTGACGCAGACGAAGT
AAAACAGAGCATCGACCAACTCAAGTCTGACTACGAGGACATGAAACTATTAGCGGCGAA
ACGACAACAACGACTCGAACAGAGCATGAAGTACTTCAAGTTTGTTGAAGAGTGCGAAGA
GGTATCGGAATGGATCGGCGAGCAGATGACGTCAGCAGCGAGCGAGGAGTACGGGCTGGA
TGTGGAGCACGTCGATACATTACAACAAGCCTTCGCTAGCTTCCTCACACAACTTAATGG
TGTTATATAGTTAATAATAAGTGTTCACTTCCCAAAATGGTAGGGGGGAAGTCAAAACCG
GCTTGTGTCTAAATCTTAATGTGAATAGATTTATGTGGCAACACCACTGGGTAAAACTGT
GAATGAAATATCGTGAGAAAGAACACAACTTTATTCCACACACACAAA
(10128 bp)

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