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Last updated: 2022/11/18
NameA_TrvaMG_comp26996_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_pre-mRNA-processing_factor_39_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000243 C commitment complex
GO:0000395 P mRNA 5'-splice site recognition
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level
FPKM:5.59 TPM:4.71
ORF EntryO_TrvaMG15456_complete:A_TrvaMG_comp26996_c1_seq3
Sequence
(Nucleotide)
TTTGTCAATTTGTGGAAATGTTGAATTTATCAATCTAATAAAATTAAAATTATAATTTGA
TCTTGTTCTTAATATATTGTAGCTCGAGTGAGTTGAGTCTTGTTTTCGTGTAATCATATT
TACAGTTCGGAATCTGATACACGGCCATCATAAAAATGGAAGATGAAACAAATTCCGACA
TTCAGAAAACTTCTGAGAACCCAATGGACACAGACGAAGGTCCCTTGCTTAACGAGAACT
CTAATGGACTTTCTCACATATTGACGGAAGGTGAATTTAATAGCGTCGATGCAGCTGTTG
ATGAGTCCTCCACTTCTAATCAATGTTTCTTAAACGCTGTGGAGTTATCAGAAGGAAGCG
CCGGCGATTACCTTGAAAATAATGGCCCTCGCTTTAGTACGGACTCTTTTGATATTGGAG
ATAATGCAGTTACTTTTCTCAACGATTCTTTAAATTGCGTGCTAAACGAAGACAACTCTA
TACAAAGTGATTCTGCATCTCATAAAGCAGTCTTAGACACTGACAGTAGGCAGTCTGAAA
GTCAACCTGCCGCATTAGGGACAAATGAAAACTCTGATAATGATAATTTATTTACTATTG
GCCTTAATAGGGTTACAACCGAGACTGACTGTGATATTCATGACCAGCAACAATCAGAAA
ATAACATTTACTTAGATAATGACTCCAAACTCGAGTTAATAGATAAACCATTTGAAGAAA
TAATTGGTAATTCTGAAGTGATAGAGTCTACACCACAATCAACAGACAACAATGACTGTT
TAGAAGTACCAAATGAACATATTCTTTCTACTGAAATTAAAAATGTGATTGGCCAGTCAG
AACCTCAATCGATGGAAACTGATGAACAATGCAACGAGGAGGTTGAGAAAACAGAAGAAA
ATAATGAAGCTCTCAAAGAAACACCAAATAGGGTTGGTGGTGCAGAGGAAACAGAAGTTG
TATCAGAAGATGAGCTCCCGGAAGTACAAAAGCCGAGCATCAAGGATGCTGAGAATGTAT
CAGATGATGAATTACCAGGACCCAAACCAGCAGAATTGCCTGCTGATACTGAGGTTGTGT
CAGAGGATGAGCTGCCATCTTCGAAAAAAGAGTCCAGAAAACGCAAACCAGATGAGGAGA
AAAGTAATTATGATCCGGGATCACCAACATCAGAGGGAGAATCTGCAAACAAAAAACAAG
CTGTTGCTAAGAATGGTGAAAGCAAGCCTGTACCTGCAGAGAAGAGAACTTCGATTGATG
AAAAACCTAAACCGAAAGTTCTACCAGAATTAGAAAAGTACTGGAAAGTTGTTAATGACG
ATCCAACTGATTTCACTGGGTGGACTTATCTATTGCAATATGTGGATCAAGAGAGCGACG
TGGATGCGGCTCGTGAAGCGTACGACGCGTTTCTGTCCCATTACCCGTACTGCTACGGGT
ATTGGCGAAAATTCTCTGACTATGAAAAACGTAAAGGAAGTAAAAAGAAGTGTTACGAGG
TATTGGAAAGAGGACTTAAAGCTATACCACTATCCGTAGATCTCTGGATACATTATCTTA
ATCATGTAAAGACAACAAGGACGGAAGATCATGCATTCATCAGGTCACAGTACGAACGAG
CAATAGATGCCTGTGGCCTCGAATTTCGCTCGGATCGTCTTTGGGAGTCTTACATCAAGT
GGGAAGCGGAAAACGGTTCTGCCCTCAATGTTACAAATATCTACGATCGTCTTTTAGCAA
CACCTACATTAGGTTACACTTCACATTTCGACAATTTCCAAGAGCACGTGATGTCGGAGC
CGGTGTCGGGCGTGGTGTCGAGCGAGGAGCTGATCCGGCTGCGCGGCGAGGTGCGGGACG
CGGTGGGCAGCACGCCCGCGCTCGACCTGCCGCCCGGGGAGGACGAGCCGCTCGATCACA
TTGCATCGGAAGAAGAAGCACAAGCCATCAAAGAACGTATAGTTGCGGCGCGGAGGAAAA
TACACAAAACTACGGGCGAAGAAGTAGCCTCGCGGTGGACTTACGAAGAGGGAATAAAAC
GTCCATATTTCCATGTGAAGCCACTAGAACGTTGTCAATTGAAGAATTGGAAAGCATATT
TGGAATGGGAGAAACAGCATGGCTCGTTCAAGCGAGCGCTGGTACTACACGAGAGATGCC
TTATTGCGTGTGCCTTATATGAAGAGTTTTGGATGAAGCTTATAAAGTTCCTGGAAGAGC
GCGCCGAACAAGATCCCGAAGCGATAGCTATAGGGCGCGAGGTGTTCGAGCGAGCGTGTA
CCGTGCACCATCTAGACAAGCCCGAGCTACATCTGCACTGGGCGCACTTCGAGGAAGTAC
AAGGGAATACAGCCAAAGCAGCTGAAATCCTTGATCGTATAGAGAAAACCTGTCCCAATC
TTGTTCAAATACAGTATAGACGAGTGAACCTCGAGCGGCGTCGCGGCGATTATGACAAGT
GTTCCCAACTATACGAAACCTACATCGCCGGCGCCAAGAACAAGTCGATAGCCTCGGCCC
TGGCTATCAAATACGCACGTTTCCTGCAACACGTGCGGCAACAGCACGCCGCCGCCCGCA
CTGTGCTCGACGAGGCTATCACTAAAGACCCGCTCAACTCGAGACTGCACTTGCAGAGAC
TAGACCTCGCTATCAACACACCTGGAATTGCTTATGAAGAATTGGATGAGCTGGCTCAGT
CGTACGGCAAGCAGGAAGGCGCGGACCCGGAGGAGAGCGCTCGCATGGCGGCGCGACGAC
GCGACCTCGCCGAGGAGCTCGGGGACGCCGCGCACGCTCGACTGGCACACGCACACGCGC
GGTCGCTCGCCAAACATCTACGCAAGCGGACGCGCAAAGAGAAACACGACCCGCCGCCGC
CACCCGCATCCACGGAGGTAAAAAAGAAGGAGAGCGCCACGACAGGAAGCAACACCGTGG
CTACAACGAGCGCCAACTACTACGCACCAGCAGGAAGCGCGCCCACATACGAGCAGTCAT
ACACGCAGCCCTACCAGCCGCCCTGGGGATACCAGCAGCCACCCGGACCCTACCAGCATC
ACCCGCACGCCTGGCCGCAGTACCCCAACTACTACTAGACTACATATACAACCGTACAAG
ACATGCTTGCAAATATAACAATATTTACTGTATTCATTAATTTTATTAGTCCATGTTTTA
AGAGTCTTTAAAAACTTTAAAATAGCGAATTAAAATCTTATATCCAAGATTTTATAAAAG
TTATAATATAGCAGTGATTGTTATCAATATTGACAAAATTTAAGTTTTGAATTATATTTT
ACAAATCATAAAAATTACAAAGCTTAATTTCCAGTAGTACAATTTTT
(3347 bp)

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