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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26994_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_patj_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
Transcript
Level		FPKM:6.19 TPM:5.21
ORF EntryO_TrvaMG15447_complete:A_TrvaMG_comp26994_c0_seq1
Sequence
(Nucleotide)
TTCAACTTTCAAACATTCTAAAAATTTACTAATCGTGAATACTTGTGAGATCGAAGATAA
ATTTAAAGATTACAAGTGAATACAAACTAAAATCATTTAATTTGGGAAGCATTAAAGCCT
ATTGAAGCTGACGTGAAGTCGTTTATTCATAGTTTCGATTTCCACTGAATTCAGGATGCA
TTTAGGAGTAAATGTCTCTAACGCCCTACAGCAATTAGAAAGCGTGAAATCTGCCGTCGA
CCAAAGCAATGATCCTAAACTCAAGGCAGCCACAAGTGATGACTTGAACATGTTAATTAG
TTTGCTGGAGAGTCCAATATTACGAAGTATTGCAACTCTCCATGATTCCGTGGGTATGCT
TGCAACTCAGGTGGCGCATCATCCATCAATTTTACCGGGAGATTTCGACATCACACCTGC
AGGTGACTTAGCATTGCAAACAAGGAATTTGTACGGAAATCAAGAGGGTGAAGAAGAACA
AAGAGTACCTCAAGTATCACCACCCCATAGCTTAGAGTTTGGGTCTGACAATGAACGAAT
TCTCGGTCTTGATAGTGGCTCTGTTGATTCAAACATGTCACCCAAACAGAGCCATGGCCT
CATGGATTTGTCTCGGAATGATGATTCTCTAGCATCAACTAGTAACAATATAGTCGCAGG
AGACTGGGCACAAGTGGAAATTATAAATCTTGTTAATGATGGAACTGGACTTGGTTTCGG
TATTATCGGAGCACGAACTAGTGGTGTTATCGTAAAAACTATACTGGCAGGCGGTGTCGC
CGATCGTGACGGACGACTCAAATCTGGAGATCACATTCTACAAATTGGAGATGTTAGTCT
CATGGAGATGGGTTCTGAGCAAGTGGCGGGCGTGTTGCGTGCGTCCGGCAGTCGAGTGCG
GCTCGTGGTTGCGCGGGCGGTTGACCCGGCTGCGTTGCACGCTTCCCCAGCTCCAGTCGT
TCCAGCCAGACTTTTATCAGATCCAGAATCACTAGATCGCTATCTAATGGATGCTGGTTT
CGAACAAGTATTTCATACACAGACATTGCCACTCAGCTCTACTTCAACTAGATTTGTATT
TGACAAGTCCATCACGCCGCCTCCAGATTCAGATGCCGAATCTCCAGAGGTTGATAGATT
CACAGTACAACTGAAGAAAGATGAAAATGGTCTTGGTATCACTATTGCAGGTTATGTGTG
CGAAAAGGAGGAACTGTCAGGTATATTCGTAAAGTCTGTGACTCCGGGAAGCGCTGCGGC
TCTGAGCGGCATGGTGCGGGTCAACGACCGCATCGTCGCCGTGGACGGAGTCTCTCTCGC
TGGGAAATCTAATCAACGAGCAGTTGACGCTTTGAAACAAAGCCGGAACATTGTAACGCT
GGAATTAGAAAGATACCTCCGCGGTCCTAAATACGAGCAGCTACAGCAGGCGATAGCAGC
AGGCGAGGCGGCCGCGCCCCCTCCCCCGCCCAACCCCTTCCTGCACATGCACCGCGCCGA
CACGCACTCGCCCGAACAGGACATACAGATGGCACAACTTAATAATGTGGATAGTGGTAC
GGATGAATCTTTACCGGTGAGCCGCAGTCCGCCGCCGACTGTACCGCGTCCTGCGCCCGC
CTTCGAGATGCCGCGAACACCTGAACAGAAAGAAGCTATCAGAAGGAAATGGCAAGCTAT
TTTAGGTGATGACGTGGAGATAGTAGTGGGCGTTGTGGTCCGCGGTTGTGGTGGACTCGG
CATCTCGCTGGAGGGCACCGTGGACGTGGAGGGGGGCCGCGAGGTGCGCCCGCACCACTA
TGTGCGCTCCGTGCTGCCCGAAGGACCCGTGGGACGCGCCGCCGTGCACCGACCAGGAGA
CGAGCTGCTGGAAGTGAATGGTCACCGGCTACTGGGAATGAATCACTTGGAGGTTGTGTC
GATCCTCAAGGAGCTGTCGAGCGAAGTGTGCATGGTGTGCGCCAGGCCTCGACCCGCTCC
AGCACTAGACTTGGCGCCGCCTTCCACTACCTTAGTCAAGGCGAAATCGGACGGCAGCCT
CGCTGGTGCCGGTGCAGAGGAAGGTGGATCTCTATCAGCTGCTGGAAAGGTTCGGTCACG
GAGCCTCGAACCACTTACAGGACTAGCTATGTGGTCATCTGAACCACAGATAATAGAGCT
AGTGAAAGGCGAGCGCGGTCTCGGGTTCTCGATCCTGGACTACCAGGACCCGCTGCGTCC
GTCGCACACGCTCGTCGTGATTCGCTCGCTGGTGCCGGGCGGCGTCGCGCAGCAGGACGG
ACGACTCATACCCGGGGACAGGCTGCTCTTTGTTAACGATCAGAACCTCGAAAACGCGAG
TCTGGAGCAAGCAGTGGCTGCTCTAAAAGGCGCTCCCCGCGGAGTGGTCCGCATCGGCGT
CGCCAAGCCTCTGCCCCTCGCCGACGCGCCGCCGCCGCTCCCCACCACGCCACCGCCCAC
CAACCTCAGATCATCCTCTTAAATATCACTCTAAATCAGTGGCGATGTGCCTACAGTAGC
CCATTTCTTTCGGGTTCCCTTTAAATATTCGTAAATCTACAATAAACAAAATATAGAACT
GGGAACATCTCAAAGGCAATTTCAGAAAAGTAGCATTTAAAAAAATATTTGTAAGGATAG
TCTGTACAAACTTTATTCTTCGCCACTGCTCTAAGCTTTCTATTCAACGCTGTCTAAATT
GAGTTATAACTTCTAAATAACTAATGTGATTGCTATTTACCGTCTGGTTAATTCGGTACC
TCTTCTCTAGCTTTAACTGTAAAATATTGATCCAATACACTTTATAGAGTTTTGAATTTG
AAGAGTAATCTCGAAATGTATAATTTGCGATTTAAATGTTTTACCAAATGCGGTAACGGT
TACCGTTACTGTCTAAATTTTATGACTAAACTCTCATAATTATAATGCCACGCTGTGACA
TCAGATTTTGGTATGGTACTATTAATTTTCTTAAAAATACATGTTACGCCCGAATTTGTG
TAAACATCAATTAAAAAAAAAAGATAAATCTATATGACTAGGTATTTGTATACGTTTTTG
CCCTTCGTGATATGGTAAGAAAAACTATTTTAACATTCGATTGAAACTTTACATTCCTTA
AATAAAATACTTTTTTATTATAAGACAGAATAACAAGCCTATGCCCCACCTGATTATGAA
TGGCATTCCATTATGTACTTAATCATTTTTATTCCAAATCAATTTATGATTACTTGACAA
GTACGATAATCTTTATCGTAACTTAAATTTAAGTTTATTTTATTAATTATATGAACAATT
TGTCGTTAATGACTATTACCATAGTATTATGTACTTAAATAAATGTATTGATGTTATTTA
GAATTTAATTAATGAGAAGAATTTATTGTTAATTAAGTATTCGGTATAAGTAATAAAGTT
TATT
(3424 bp)

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