SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26990_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chromodomain-helicase-DNA-binding_protein_Mi-2_homolog_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_TrvaMG15423_3prime_partial:A_TrvaMG_comp26990_c0_seq1
Sequence
(Nucleotide)
TACTTTGTTTGGTGTATGACATACCTGCGGGCACGGGGTTGCCGGCGGTGGCTGCGAGTC
GCGAGAGGATGGACCGCTCCGACATCTGCAGGCGTTGTGCGACGGGCGGGATGCGCGCCA
GCGTGGCGGGGAGCCGGGACACGTCGGACTTCATGTCCGATAGCAGCTCCTCCAGCTGGT
TCAACACCTTATGCAAGACCGCATTGGCGGGTTTGTTCCCTGCGAGCGACTCCTTGCTGA
GGTGTTGGTGCGACTCGGCGAGGCACTCCACCTCGGCGAAGCGCGCGTTGAGCGACATGG
CGGGGTGGTTGGGATCCTGCGTGAGGTTGAGGTAGGCCGCGCGACGGAGCTGCTCTTCGA
TCACTAACGCTTGCTCTAGTAGCTTAAAACGACGAGCCAAGAATTTATTCTTGATCTCAA
GGAAGTTTCCTTTGCCGACGTCCATCTTAAACGGCTCGTTAATGATGGCAAAGCGCAGGT
CATTCTGTATATCTTGCCAGCGACCGTAACCGTGCGTGACTATGCCCGCTAGAAGCCAGT
AATCGTGCCTTCTGTGCCATATTTCATACTCTCTGCCGGGCGCGGCTGCTCGTTCTTCGT
TGAGCCATAGAGTATGGAGCTCAGTGAACCCTCCGTCGGCGATGTTGAACATGAACTTGC
GACGCTCCACTTTGAGATCTTCCTCTTCTTTGACTAAGACAACGTCGTCATCATCGTCAT
CCTTTTTCTCATCCTTAGGTTTTTCGGACACATCAGACCCAGTCTTCTCGCTCTTAACGT
CGTCTTTCTTATCAGGATCTTCCTTTACTTCCTCTTTAACTTTAGGAGACTCCTTCTCGT
CCTTCTTCTCTTCACTCTTCTCATCATCCTTGGGAGGCTCCTCGTCCACCGACATGCGTC
TTTCCGGGTCTTTCTCTTCCTCTTTAGGTGAACCTTTTTCTTCAACGCTATCTTCTTTGC
CCTCGGTGGTGTCCATTGGTTCCGATTTAAGTTTATCTTTAACATCAGCCTTGTCGTCTT
TTGTTTCCTCTTTGTCGTCTTTGTCCGATCCGGCGGGCGTGGCCTGGCCGTGCGCGAGGA
GGGTGGGCGCGGGGGAGGGGGCGGCGGAGGTTATAGGAGTAGCGGTGGACGGCGCAGGGC
TGGGCGCCGCACTCTCGCTGGCTCCCGACACCTTCACCGGCTCGACTGGCTTCCGAACCA
ACTCCGGCATACTGTAGTACCCGTTGATGTGTTCGAATTCTTGCACTTTCTTCCTGATTA
GACTCATCACACCGATTCGAGTTAGCACGTGCTGACGAGATAGACCTTCTCTTGGAACGC
CGTCTGCAAATGTCTCAGCGTTATCAGCCCCTGGTTCGCAAAGATGCCGCATGAATAAGG
AAACGTAAGCCTTGAAGTTGCGTTCTGATTTGCCACGTAAGTCCCTCACTAACCATTGCG
AGTTGAAAGCGTCCTGCGGTGGCATGCCGTACCGCATGATCGCATTGAGGAATGACTTTC
TTTGTCTAGCATTGAATCCAAGGACTTCCATGTTTCCTCCAACTCTGGCCAGTAGGGGTG
GTAATGGCCGATCGCGTTCCTCCCGTTTCTCGAGGCGTCGCTTGCTTCGGCGGCTGAGCA
AATCTCCGTTGTCGTTCTTTTCATCGAAGTCGTCATCCTCTTTATCGTCTTCGCTACCTT
GAGAGAAGTCTGAATTGTAATCTGATCCATTCTCTTGCCAGGTGGAATCCTCTCTGTTTT
CAGTTTGAGCAACACTGCCGTCATTGTAGTTGACTTGTTTACGAACTCGCTTTCCTTTAC
CGAGCGTTCGCGCTTGATCTTCTTGATGTTGTTCATAATGATGCCTAAGAAGTTTGATCC
AGTACGCCGGGTCAGTGTTCTCTGCTTCTTGCTTAATAATCTCTGTATCAACTTCTTCTT
CTCCGTCGCCTTCCTTGGTGGAGTAACTTGCAACTTTGAAGGAGCTAAGATATTCATTAG
CCCAAGATTCCTTCTGTTCTATACCTTCCTTGGATCGATCAAGCAATTCACCGACAGCTT
TATCGTCATAATGAATAGCTTCCTCTTTGCCTTCATCTTCTTTGAACAACTCTTCTGTGC
CGAACCGTAGAATATCATCCAACTCTTGCTTAGTGAAGTTAGCTCCCTTGCCTCCCATAC
CGGGTCGTACCACTAAATGTGTCAACATCATTTTTCGTTTGGCGACTTGAGTAACCCTTT
CCTCCACACTGTTACGTGTGACGAAACGATATATCATAACTTTATTGGCTTGACCGATAC
GATGGGCTCGGGAGAAAGCTTGGATGTCGTTGTGAGGATTCCAATCTGAATCATAAATGA
TGACAGTGTCGGCGGTGGCCAAGTTGATACCTAAACCTCCTGCTCTTGTGGATAAGAGGA
AAACAAATTGCTGAGCACCGGGAGCATTGAATCTATCTATAGCTTCCTGACGAATAGTTC
CCGTGATACCTCCGTCAATTCTCTCATACTTGTATCCTTCGCCTTCCAAGAAATCTTCAA
GGATGTCCAACATTTTCGTCATCTGCGAGAAAATCAGTACTCTATGGCCCTGCTCTTTCA
ATTGCTTTAACATTTTAGCGAGAAGAACCAGTTTCCCAGAGGCTTTAATTAAAGCCTGTG
TATCGTAATTTCCATGCGGACCTAACGGAGCTTCTTCAGCTGCGACAGGGAACAAGTAAG
GGTGGTTACAACACTTCTTTAGATCCATCATAACGTTGAGTAGCGAGACAGTTTGGCCTC
CGCTCTTGGGATTCAAAGCTTCATAATTCCTAGTAAGGATGTACTTGTAATATTTCTTTT
GCATGGGAGATAGCTCCACACGCACAATAAACTCAGACTTGGTGGGCATGTTTTTGAGCA
CGTCAGCTTTCAAACGCCGCAGCATGTGCGGTCCTAACATTTCGTGAAGCCTCTTCACTT
GTTCCTCTTTCGAGACATCGGCGAACTCATTCTGGAACGCCGCGAGATCATTGAACTTAT
CTTTGTTCAAGAAGTTCAAGAGATGGAACAACTCTTCCAAGTTGTTCTGTAGTGGAGTAC
CAGTTAAAAGTAGCTTGTAATTAATATGATAACCAGCTAAAAGCCTAAAGAACTTCGACT
GATTACTCTTCAGTCTGTGAGCTTCGTCTACAACGAGGACAGCCCAGTCAATAGATCCTA
AACAAGTTGCATCAATTGAGATCAATTCATAGGAAGTAAGTAAAACATTGAATTTTACTT
GCGACTTAATTTTAGAAGGTCTACCGCCTCTGTTAGCACCGTCGTCAAATGTCAATTCGT
TCTCTCTGATCACAGCCCTTGAGTCTTTGTCACCTACATAAGTAATACAGTACAGATCCG
GTGCCCAGAGTTCGAATTCTCTCTCCCAGTTAATGATTGTGGACAGCGGCACAGACACCA
GGAATGGCCCCTTGCAATGCCCTTCCTTGAAGAGAGAGTACAGGAATGTAACAGTTTGTA
TAGTTTTACCGAGACCCATCTCGTCAGCCAAGATGGTGTCAATGCCTTGACCCCAGGAGT
ACCGGAGCCAGTTGAGACCTTCCAACTGGTATGGATGCAGTTGCATGCCAGTCTCGTATA
CGAATGGTGGTTGATCTTCGTATTTTTTATTAAGATTACTGGTGGGTCGTTCCGGCGGTG
GGTTGTATTTCTTGGGACGCATTTGTAGGCCAGCGCTGCTGTCATCCTCGTCAGTGATAT
CCTTGTTCTTGCTCTTGCGTCCTGGTTTCTTACCTTTCGAGCCTTTAGTTTTACCATCGG
ATGTTATGAACGCGCGCATGTCTTGATAATATTCAATGGCCTGTTTCAATCCAGCAATAT
CTTCATGTTCTGATTCCCAAGTGGCCTGATCGTATGATAGATCGCGCCATTTAACTAAAA
AGTACGTCGTGCCGTCTCTTGAGGTACGATGATTGATCACGCGATGTACGACCAACCATT
CTGGTTTGACACCATATCTATAATACTTCTCCTCGAGCAACTTCTCGTTATTAGCCTCTG
AGTCGTGTTGTTTGTCCTTGAGTCGCTTGTACCGGCTGTCGCGCTCGTCGAGCGGCTCCT
CCAGCTTGGGCGGCTCCTCGGGGTCCGACTTGCGCATGTAGTACCGGTACATCAGGGGGT
GGAATACGTCCAACTGCAATTCAGATATCCAGCTGCAGTGCCAGTAAGATCGTTCATGCC
ACTTCACAAAGAACTCTCTGGAACGTGGAGCCTTTGACTTGGCGGAGTGTTCCTTCCATC
GCCATGTTAAAATCTTCGCCACTTTACCATCCAATGGTGGACAACTGCATCGAGGGCACT
TCCAGTCTCCGTCCGGTACCTCATCGAGCGGCGGGTTCAGACAGAAGCGATGGTAGGCGG
ACGGACAAGAGTCGCAGCACAACAGCTCGCCGCCGTCTTTACATATTCTGCAGAACTCCT
GATGTTCGTCATCATCATCGTTGTCGGGCGCGGGTTCGGCCTCGCAGTGCGGACAGGACC
AGCGTCCCTCGGGCGTCTCCTCGAGCTCGGGGTCGAGACACACGAGATGGTAGGCGCGCG
GACACGTGTCGCACAGGATTATCTCGCCGCCTTGTTGACATACCTCACAATAATCCTGGT
GTTCATGTTCACCCTCAGCTCCGTCAGGAAACTTACTTGTTGTCTTCAACTTCCTTTTCT
TCTTAGATTTATTACCTATTTTTGTCTTTGCCTTCTTTTTGGGTACCGTGACATTAGGAT
CATCCTCTTTAGGCGGTGCGGCGTCCTCGGCGGCGGGCGCGGCGGGAGGTTTGGTCTCCT
CGGCTTCGGCCAACATTTGCTCAAACTCTGCATCTGAGTCTGAATTCACGGCGCTGCCTT
CGTGTTCTTCTTCACTGCTTGTTCGTTTCCGTTTGCTGAACTTGATCTTGAGCGTGGGCA
CTTTAGGTTTCCGTCCCGGCTTCCCCCGCGGCGTGGTGGCGGCGGCCGCGTTCTTGGGTT
TGCGTCCACGTTTGCGAGGCATAGTGGCGCCTTCGTCACTCGCTTCCTCTTCCTCTTCTT
CTTCCGGCTCTTCTATTGTTTCGTCGTTCTTAGTCTCTTTAGGCGTGCGACCCGGTCTCT
TAGGAACGTAGTCAGAGGTGGTTGAAGTGTTTGTGTTCTCCTCGGAGCCCATGCTTTGAG
GTACAGCGGTGTTTAGGTGTGGATTCGTTTCACAGAACATACGCCATTTCGCGGCGACTA
GCATCATTAGTTTTGACACTGGCACCTTCGGGTTTTCTTTGACGAGCATCGGCCGTACAT
GCTGTTGGAACAGTTTGTATGTGGTCAAGTTTTCATAGTCTGCGTCTACGTACTGTATGT
CTACGTCTGTGAGACCGAATGACGAGCACACCTCCTCCACTGTTGGCATACCGCAGCCAG
AATCAGATGCAGCAGGTGTTGACGGTGTGTTGTGTTTGCTGCTGCGACCCTTACGAGACT
TCTTGCTCGAGGATACCGCACTCAGTGCGTAGTCACTGTCACCTTCAGCCTCCATTTCCA
GGCCAAAGTCATCATCATCTTCACTTTCATTCTTTCGCTTCTTCTTTTTCTTTCTTCCTT
TTTTCTCTTCTCCTCTGGCTTTCCTTTTCTTTCCCTTTTTCTTTTTACGGCCATCTTCTG
GGGAATAATCTTCATCTTCCTTTGGTGGGGCTTCATCACTGTCTCCAGAATTATCATTTT
GACCCTCACCTTCTTCCACTTCCTCGTCACCTGCAAAAGAACCGTCTACTTCCTCATCTG
ATGCCATTTAGATCTCTGTTGAACACAATCTGTATTGAAAAGATAGATTTTTGTGTAGAA
AAGATAAAGGACGCGCAGTTTTTGCGACAAATTGTAATTAATTCAGAAATTGATGCCG
(5878 bp)

- SilkBase 1999-2023 -