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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26982_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_double-strand-break_repair_protein_rad21_homolog_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008278 C cohesin complex
GO:0016020 C membrane
GO:0016925 P protein sumoylation
GO:0034991 C nuclear meiotic cohesin complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:10.55 TPM:8.88
ORF EntryO_TrvaMG15405_3prime_partial:A_TrvaMG_comp26982_c1_seq1
Sequence
(Nucleotide)
TTACGTTGATTCGTTGATCGTGGAAAGTTATTTGATTTGTGATTAAATTTCTAGGAAAGT
GTTAATGTAAGTTGATCAGGAAGTGCCAGTGTCATCATGTTTTATGCACATTTTGTGCTG
GCCAAGAAGGGCCCGCTGGCCAAGATTTGGCTGGCGGCCCACTGGGACAAGAAATTGACA
AAAGCACACGTTTTTGAAACCAACATCGAGAAGTCTGTCGATGGTATTTTGAAGCCGAAA
GTGAAAATGGCCCTTCGTACCTCTGGACATCTTCTGCTTGGAGTTGTGAGGATCTACTCA
AGGAAGGCTAAATATCTGCTTCAAGACTGTAATGAGGCATTTGTTAAGATCAAGTTGGCC
TTCAGACCTGGAATGGTAGATCTCCCGGAGGAGCACAGGGAGGCAGCAATGAATGCTATC
ACTTTGCCCGAGGTCTTCCATGACTTTGACACTGCTATGCCAGAGTTAAATGAAGTGGAC
ATTGAGGCTCAGTTTTCTCTAAACCAGTCAAGAGCGGAAGAGATCACGATGCGTGAAGAT
TACGGTTCATTGAATCTTGTAACCCATGACGATGGATTTGGAGACATGGGTTTTGATACT
GATAATCCAGATATAATGAGAGAGGCTATTGGCTCTGAAGGTGGTCTTGAACAGAGCAAT
CTCCTTTTTGCGGATGGATCATCTCTAGAATTAGGTGGCAAGGAATCTAGTTCAAGACCT
GGTACAGTGCACCAACGAGCCCTGGAACCAGCCCCTCATGCTCCTGTGGATGATGGTTTT
GGAGGGACTATTGGAGATGTGCCAGATTTTGGACATGCGGGAGGACTTTTTGAAGGCGAT
TTGTTTGGTGACGTCACGGCCGGTGCGAGCGGCAGTGGTACCTCCTCCGGCATGCCGGGA
GCGTCGGCGCAACCTCAGTCTTTGCAGGCGGAGATAGAGGCGGCGGGCGGTGGAGAGGGC
GCGGGGAGGGAGGCCGGAGACGATCCACCGGACTCTGATGATGACATGCCCGATCACTAC
GATGCACCATCACCGCATCACAGTTGGGGTGGTTCACCAGTACGTGAAGATCCTCCCGCC
GAAGAGGAACCAGTTACAGAAATGGCACCACCGCCCGTACCGAGACCACCTTCTGTTAGG
CCTATGGAAGTGGACGAGGTTCCTGAACCCGCCCCGCCGACGCCAGGACCTCCCGAAGCG
CCTGATAACACAACTCTACTTAATAATGATGAAGAATCATTCGCACTTGCACCTGTCGAT
GCTACTGTACTGAAAGGAATAACAAAAACAAAACGCAAACGTAAGCTAATTGTTGATGAA
ATTAAGAACATATCTGGAGAAGAAATGAAGAATCAACTTAGCAACACATCAGACATAGTT
ACAACATTAGACTTGGCCCCTCCCACCAGGCGACTCATGCATTGGAAGGAAACCGGGGGC
GTTGAGAAACTATTCACATTACCCGCTAGACCTATCCCTTCAAGGGTTCTGTTCAAGAAA
TACCAGCGTAATATGACATTACGTAACGAAGGCGAGGAGGTAGAAGCCAAGTCTCCGGAC
CCCGAGCCCAGCGTGGCGCGCCGCGGCGGCAGGAAACGGAAACATGATGACAATTTACCG
CCTCCTGAAACGCCAGCTCCTCAACCTTCAGAATTAGAAGCTCCAGTACCGATACCACAC
GAATATGAACCGTCAGTCGGTGGTGTTCTGTCGTCATTGGGTCCCCTGACCCCGGGCGGG
CTGGGTCCTCTAACGCCGGGAACGTTACTACAGGCCGCACTCACTCCGCCCTCGTTGGGT
CATGGATCTATGACGCCAGGTGGTTTGCAACATGGCGGCATGACGCCTGCTGGACTACAA
CACGGCGATCACCAAGAATTAGGAATGACCCCAGCTGGATTACATCATGGAGGTATGACA
CCTGGCCTAGGTTTAGATAG
(1940 bp)

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