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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26975_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.34 TPM:1.97
ORF EntryO_TrvaMG15369_complete:A_TrvaMG_comp26975_c0_seq1
Sequence
(Nucleotide)
GTAAAACGCTCTTCAAAATTAATTGTTAAAGTCGTGTTAAACCGCTTAAATAGTGCGTTA
CGGGTTATTATTAACTTTTATATCAGTGAGTTCGTATAATAACACATAAAATAACTGAAA
AAAGTGAATGGAAAAGCTAAATAATAAGTGAATTATTGAAGAACATTCAGTTTTGGAGGT
TAGTTGTCAGTTCAAAAAACAAAAGTGACATCTGACGTTTCGTTCGGTGCTACCAACAGA
ACAACAACAACAACTTCGTCCAGAAACAAAGTTACGTTTCATTTTACGTAGAACAATGTC
TACTGCACTTTCACCTGAGATGTCATTGCTTCTGTCAAAGATGACAGAACAACTTAACCT
GCAAACTATTAAATTAACGGAAAATATCACTGCAGCGATTTTACAAAGAGTTGATGAAAA
AATACAACCAATAATAAAAGAAAATAAACTCTTAAAAGAAGAAATCTCAAAATTAGACTT
AAAAATTCAATATCTTGAAATGAATAACAGAAGTAATAATGTCATACTACATGGAATCCC
TGAATCAAAAGATGAAAACTACAAAAATTTAACTACGCTTGCAATCTCAACATTAAAGGA
AATTGAAGTGGTTCTGGAAGAGGGTGAAATCAATAAACTACATAGACTAGGAAAGAAGAG
GAATGATAATAACAAAGTAAGACCTATCCTGTTGTCTACAACTACACTACAAAAAAAAAT
ATTAATACTAAAGAATAAAAAAAAGATGAGACAGAACACTTACATTACTAAAGATCTACC
TAAACAAATACTACAATTGAGGAAGAATAACAGCAAAATGGATGGTAAGGAAAATGAAAA
GCGTAAGAGATCAGAAACCCCAAGCCCAGTCCAGAATGCTCAGAAACACAACGCTCCAAA
ATTACACAGAAAAGATGCATTTCTCTACATGCGGGAAAGATCAAATTCACGGGCTGAAAG
AATCATTGATAACAACTAAAACAATCAAATTAGGAAACGGAAGTTCAGAACTCCCAAAAC
AGATCAAGTTGAAAAATATAAAATGTCTCCCAATACGGCCGGTCACCGCGGGAGCACTAG
ACCAAATCCCTCCAACTAAGGAACGAAACATTCTGAATATTGCAACACTCAACACAAGAA
CTCTAAGAACCCATGAAAGTTTAATGGAACTAGAAGACGCATTAAAAAACATTAACTATG
AAATTCTTGGCATCAGCGAAATGAGAAGATTAGGTGAGAGTATAGAAGAATTCACAGATT
ACATACTATACCACAAGGGTGAAGTAGCAGGTCATAGAGGAGTTGGTTTTATTATTAAAA
AAACAATGAAAAACTTTATACAAGAGTTGATAGGTGTCTCTGACAGACTAGCCATACTTA
ACCTAAAACTGCCTAGCTACAAAAAGCCATGGACGGTGATACAAGCTTATGCACCCACCG
AACAAGCTACAAATGATCAAATAGAAGATTTCTATAATAACTTATCGGACATCATAAGGA
CATATCAGGACAATCATATCATAGTCATGGGAGACTTCAACGCACAAGTTGGCACCAGAG
AAATAGGAGAAGAACATTTATTAGGAAAATACAGTTTTGGAAAAAGAAGTAACAATGGCC
ATAAATTGATAAACTTTCTAATGCAGAATAATTTAACACTGCTTAATTCTAAATTTAAAA
AGAATCCTAAATCTAAATGGACATGGATATCACCTGATGGTAAATATAAAAATGAAATTG
ACTTTATTATCACTAATCAAGCAAAATATTTCAATGATACTCAAGTTATCCAGAACTTTA
ACTTCAACACAAACCATAGGATGGTTCGCTGTTCATTAAAATGGAATCCGCCGAAGTTAT
CTAGAAAAAATATAATCAGGAACCAACAGTCAATAGATCACAACCTAGAGAATATAAATG
CAACCGCTTTAAGACCTTTGAAGATTAAATCTGACAGTCATAATAATTTACAAGAAGAAT
ATGATGAGATAATAACAACACTACAACACATAAAATCACTCAATACAACTTCAAAACGAA
CAAATAAATTAAGTGAAAAAACATTAAAATTGTTGGAAGAAAGAAAACTTTTAATGATAG
AAAAAAGAAGCAAAGCAAACCTAAAAAAGATCTCACTACTGACCAGAAGAATAAAAGAAA
GCATAAAAAAGGACAGGAAATCAAAAAGAAATAAAATATTGACTGAGGAAATTTTAAAAA
CAGGTGGTACAAGGAAAGCTTTCAAATATCTAAGTGAACAAGGAAAGGAGTGGATCCCAA
GGTTAAGAGATAGCAAATGTAAGGAAAAGTCCAAAAGAAAAGATATACTAAGGTTAGCAA
CTGAGTACTTCACAACCCTCTACTCTGCTAAGGGTTGTTGCCATGATACAATGTATAATG
AAAATACAAATACCGAGAAAGTTCCAACGGTGCTACCATCAGAGGTTCGGAATGCCATCC
ACTCACTTAAACTGGAAAGAGCCCCTGGGCCAGACAACATACCATATGAATTGTTGAAGG
GGACAGTGGAAGAACTGAGCCCAATTTTGGCTGAACTATTTAACAAAATATTGGTCACCA
GAATAGTCCCCGTTCAATGGGGTCAATCATGCATTATTCTTATACATAAAAAGGGACCTA
AAGAAGATATAGGGAACTACAGACCAATAAGTCTAATATCCAACATCTATAAGGTCTTTG
CAAAAGTCATTCTAAATAGAATTTCAAATACTTTAGATGCAAACCAACCCAAGGAACAAG
CAGGGTTTAGAAAGCAATATAGTACAATCGACCACATACATACTATTAAACAAATTCTGC
AAAAATATAATGAATACCAAAAGCATATATACCTAGCATTTATTGACTATACGAAAGCCT
TTGACAGTCTAGACCACAATCAAATCTGGGAAAGTTTAAACCAACAAGGAGTGAGTGAAA
TTTATACTAGCATAATCAAACAAATATACATCCAAAGTGAAAGTCATATCAAACTAGAAT
CTAAAGGTAATCAGTTCCCTATAAATAGTGGTGTGAGACAAGGTGATCCTCTATCCCCTA
AATTATTTAATGCGGTACTAGAAAGTGTTTTTAGAAGGATTGACTGGACACATTATGGAT
TGAACATAAACGGAAGTTGCTTAAATCACTTGAGATTTGCTGATGACATAATATTACTCG
AAGAAGATCCACTCAAGCTTCAAAACATGATACAAACATTAGCAAACAAAAGCAATGAGA
TAGGACTTACAATGAATGCCAGTAAAACAAAATTAATGACAAATCATATTGAAGTTAAAA
TGGAGATAGATGGAAAACCTTTTGAATATGTTCAAGAATATACCTACTTGGGACAAATTA
TTGCCTGTAAAGATATGATGTCAAAAGAAGTGGATAAAAGAATAGCTTGTGGGTGGAAAA
AGTTCTGGTTAATGAAAGAAATATTCAAAAACAAGGAAATAAGTATACATATAAAAAGGA
AAGCATTTAATATTTGTGTCTTACCATGTCTAATATACGGATGTGAAACATGGGCTCTTA
CAGAAAATCATAGATCACAGTTACAAATATGTCAAAGAGCCATGGAGAGAAGTATGCTGG
GAGTGAAGCTCAAAGACAAGATAAATAATCATCTCATCAGATCAAAGACCAGGATCTCAG
ACATACTTACTCGCATTGATCACCAAAAATGGGTATGGACTGGTCACATGTTGCGGTGTA
GTCTGAACAAGTGGAGCAAACAAGTATCTCTTTGGTACCCAAGAAACGGTACTAGAAGGC
AGGGTCGTCCAGCAAGAAGATGGGAAGATGATCTTCGCTTAACCTTGGGACCGCTTTGGA
CACGGGTTGCTTTGGACAGACAACAGTGGAGGCAGTTGGAGGAGGCCTATGCTACAAGGC
ATTACGAATTGAGGGACATACTGTAGTTGTGCCCACGTGAATCCAGCTGTGTCTGCGGCC
TTATGCGTCCGAAGACGAGTATCTCCTCTCCGGGCTGCGTTATACGTGATAGCCCAATGT
GGAGGAGCTATTGCTGGTGCTGCAGCTATCTATGGGGTAAGCGTACCAGGCTACGCTGGA
GGCCTAGCAGCGTCATTACCGGGAAGTGGAGCGGCGGCCTGGGAGCGACTCGGCACTGAA
CTAGTGCTGTCTGCTCTGGTGTCAGCGGCGTACTTCGCGGCGATGGAGAGAAGGTGGACC
GGGGCTGCTCCGGCGCTATTAGGGGCCGCGTACTGCGCCGCTAGCTTTGTCTCGATGCCA
TCGCTCAACCCAGCTCGATCCCTCGGCCCATCCTTCGTCCTCTCCCGTTGGGACAGCCAC
TGGGTCTGCTGGGTAGGAGGCCTGGGTGGAGGTATCGCCAGCGCTCTCCTCCACGAGTGG
GGCTCCAGGAAACGTCGCACTTCGTCATCCAGAGCCTCCTCTCCAAGAGACCTGGATGAA
CTGGACAAGCCAGCGTTTCCTTCCACTCATCATCACTACAGGCCTACTTATTGTGCTGCT
GCTCCTCGACCTGACACAGCTGAGCCTTTGTATTCTGGTACTAAGTCTCTGTATTGCCGG
TCACCACCTCCGGCCAGGCATACGTTGCATAGATCCCAGTCGGTGTACAGTAAAGGCAGC
ACAGCGACAAGTGGCACAGTGAGCGCGCCTCCTCAGTCGCTGGTGCTGCGTCCTCAAGCG
CCGCACGCTCACGCACACGCACTCAACCAGAACGCGCAGAACGCGCAGCGCGACCCGCCT
TACGGAGCCAACGGGATCAGACCGGGACCTGCAGGCGCAGCAGTGAACGAACGTCGCGAC
TCAATGTACGGCGTCCGTCGCCCCGACGATAATGCCTACGGTACATACTCGCGAACGCAC
GCGAGCGCGCACGCGTACCGGCACACGCACGGCGAACATTACTAGCGAACAGCCGAGCGG
CACAACATTGCGCTGCTCTTTGACGTTTAAACGAACTTATTTGAAGTGAGTGAATTTTAT
TATTGGTGTGAACTTCGTCTGTGTTACAGATCGAATAAATAAGATTATACCTAAGTACAC
GCTTCCTCGTTTACTTTTAATAAATGAAATGGTGTTTTAAAAGATCTTGATCGTTCACGT
TTGATGTAACCAAAGGAAATGAGGATTGATTTTATATTTAAATCAAATTTCTTCTGAGTA
GAGTTTCTGATGTACGATGTCTAAGTGTTAGTAAACTAATGGAGAAAAATGTGTGTAGAG
ATAAATATTGCTTTTAAGGAGCACAAGAATTTCTGATTAACGATGTTTAATTTGTATACT
AATGGAGAATACTTTAATGTTTG
(5303 bp)

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