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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26929_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cytoplasmic_polyadenylation_element-binding_protein_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0007291 P sperm individualization
GO:0007616 P long-term memory
GO:0008049 P male courtship behavior
GO:0008135 F translation factor activity, RNA binding
GO:0008356 P asymmetric cell division
GO:0017148 P negative regulation of translation
GO:0043022 F ribosome binding
GO:0043679 C axon terminus
GO:0044292 C dendrite terminus
GO:0044297 C cell body
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:1990124 C messenger ribonucleoprotein complex
GO:2000766 P negative regulation of cytoplasmic translation
Transcript
Level		FPKM:5.65 TPM:4.76
ORF EntryO_TrvaMG15001_complete:A_TrvaMG_comp26929_c0_seq3
Sequence
(Nucleotide)
TTTTTTAAGATTTAATGGACTAATATTTAGTAAAATACCATATCGTAATAATAAAAAATT
CATATAAAAATTCAAGTGATTCTCAATTTTACAATACATAGGTAACTAATGCTTGCCGGG
AAAAGTTTGCTTAGATTAATTTCTATTGAAAATTGAAAGAAATGATTGCGTGCTATTTCT
TAGATTTTTTGACAATTTGTAACATTTTTTTTAAATTTTTGTATTTTATCGTTATCAATT
TCTTTAAAATTACCTTCCCAGCAAACCGTGAATTCTAACGCTATTCAAAAAAACAAATAA
CATCTAAAACAAAATGTAAATATTACTATTAATAAAACATTTTACATAGATACATAAAAT
GATTATAAACATGCATTTCGACCGTAGTTTCGTTCTGACAATACAATCATTTACAAAAAC
ACGGTTAAAATGATTAAATATATTTTTTAAATAAATACGGTAAAGCTCCGTTAACGTCAA
TTCTACATATTGCGTTTAAACAAACACTAATCTATTATTCGAATTACAATATATAAATAT
ATCTTATTATTACAGCCAACGTGCATTATTTCCAATCGGCAAAGCTTAGTCTAGATTGCA
GTGTAAATACATACAAAAAAATACTGAAAAAAATTAAAACTAAAGTCTACAAAATCCTAT
TAAAAACAAATTACAAAATATAAAAATTACAAAAATAAAACGGGTAAAAAAATAAAATAG
GTAAGTCAAAATATATCAAAAGCTGGTGTCAAATAAAAAGCCACTCTCATTGAATCAAGT
AGGAATACGAATATTTGTCGACTCAAGAGGTAACAAACTGACAAAACATATCTCAGATAG
TTATTTCAAAATCTCCATGGACAGTTAAAATGTAGTAAAATTAAATGGAAAATTTTGGAA
TGAGTCGACAATCTGTCTTTTGGTTGAAACGTCTTTGGATCACGCTCCCTCTTTGGTCAA
AACTACATCTTAACTCCGAAAGTGTATTCAAAATAAACAAAATCCATAGTCAAAACAAAC
ACAGGAAAAAGTTTCAAATTCATTTTAATAGTTTTCACAATAGTCTAAAATAATTCATAG
GCATTTTAATAAAATTGAATTAAACCGTTATAAAAGCAGATTAAAATTTGATATAACGCC
AATAAAGATAATTATTTAAAGGTGAAAAAAAAAGATTACACATCATCGAATGCTAAACTT
AAACTCAATCAGCCTCAAGGTACAATAGTCTGGTTCGATTTTGCAAAACATAGTGATCCT
TTCACTCATCATCGACTCCCTTCAATCCGTGGCTCATTTTAGCTAAATTTCAAAATTCAA
TCCTATGTTTGATCGACAAGCAAAAAGACCATGACATTTTGCTGTTTGGTGCTTATCGCT
AGAGGAAAGCTTAAAAATTAATCTTAATTACATATTTTCTCACTAAGTTGTCACTAGGTA
AAATTGTTTTAAGAAAAAAACTAAATCGAACCAAACAAAATACCTATACGACTGTTGCCA
ATGAAATAAATAGGATCATATTGAACAAAATTGATTCTATTAAACACTTGCCAGGAATAA
TGGATCTAAAAAAATATATTATAATTTTTAGTTGAAGTTAAATTAATAATGTCGTCATCT
CGAATCTAAAACATTCAATACGGAAAATCAACTTTATGTACACCGTTGCTCGGCTGAAAA
GCACAATTATTATTTGCTTTCGAAGCAACAAAATTAGTAATAAAAGTTGATCTTCAGTAA
ATTTAAGTACACATCAAATTGCAAATCATTATCGTTAGAGACGACGACTACAAAAACTTG
GTAAGAAAATAATTTTAAATGCACCATTCGCTGCGTGAATCTTTAAGAAAATTCAGAATT
ATTAGAAAATACAGTGAAAAAACCCTCAATAAAATCACTAGATGTCAAGTCTGATAGCTG
CCTAAAATAGTATAGCATTGTAACCAAATAGCAACACTGCATTCCCGGCTGTCAAGACTT
GAAACCTCGCGCGCTGTAACGGTGCGAACCGATGTTAAAGTAAACAAAGTAAAAACATTT
GTCTAATTTCAATACTCATTTAGATACTATTTTTATTTAATTTTCAAATACTCAACTAGT
TAATGAATCTACACTTTTCTATCTTCGTATTATTTATTTAAGTATATAAATCGTTCAAAT
TTTCACTAAAATATTCTAGCACGAGAGAACATTGGTTTCTCGTTCGCGCAAACGCTAAAT
ACGAAAAATTCACTAATACGCCGATCCGCTCCGATTTAGAAGTATCAAAAAAATTTACTT
TTTTTACGGTTTTTAATTTTTTTTTCTAGGAAATCCAACGATTCTATGTACATGCAAGTG
AAATGGTGCGAAACTCTCACTCAGAGAACGACGAGGGGACGTACACTTTCATAACAACAA
CAATTCGAAAGTTCATTTTAGCTAAAAAGTACAAATTTCATTTCAAAAAATGTATATATA
AGAAATTCTTTAAATATATTAAATACAATATTATAATAATTATACGTATGACAAACTGCC
CCCCGCAGTGCGAACTTCACTCTGTGATATGCCATACAAAATTATCCAAACAATATTCAT
AATAATATTACACACATAGATAAACAGACAACATACAACAATAAAGGAGGGAAACGATAA
AATATCGAAACGACCAGCGCCCTCGCCGAAACGTGCCTCAATTTTTCCATCGCAGCTTCA
ACACCTCCAATAAACCGCTTTAGAGCGAATAAATAAAAAGGAAATAAACGAACCTACAAA
CTAACAAGACAAGCCTCGCAGTGGAAAACTTAAACATCCCTCGAAATTAACTGAAAAAGA
CCATTCAAAATTCTATGACAAAAACTGCGAGACCAAGTAACAAATTCAAAAAGCGGGAAG
AAACTTTCCCCCGTGAATGTCAAACGTAAAACAATACAAATATCTTCTAAACAGTAGTAA
GCCTTTAGCTTCTAGACGCCTCTCATCCAACGCCCGCAGAATCTTTTCAGAATATTGAAC
CGACATCTCCTTACTCGCACATCACATCAATGGGAGAATTATTTCCATTCATTTAAACAA
CCGCATCCACAAAGCGTATCAACGCCGCGCGTTTCAAAATAAAAAGAATCTCGTCCGAAT
CATATTTTACACAATCATCGATTTTTTTTATAAAAATACAAAAATACAAAATGGGATAGT
GCTATACGACACACACACAACACACTCAAGCGTCTCGCCACTGTTTATTTTCAACTAGGA
GGTTAGGGGGCATGAATTCGACAATAAATATTTGAGCAATCCCACTAAAATAAAGAGTAA
TGACTGGTAACGTAACTACCTAATGCACGCACAAACCCCGGAAAATCAAAGTGTTGCAAG
GAATAAATTTTAAAATCTACTACAAAAATAATGTGTTGAGTGAGAACAAGAATGATCGCG
TCCACATCGCGTCGCATCAAGTATTTTATTAAATAAAGAGCGTTTATCAAAGGCGTGATT
TTAAAAATTTAATCTATAGTTAACTTTTAATTAATTATTACGAGAAAAACTTGCACATAC
GCCACTCGTATTTACCAAAACAAACTATCAATTTCACTACAGCGGCGTCAACCGCGTCCA
CACGCGTACTGTGAAACTTTTCCTATTGAAACTCAACTATAATTAAATTATCTAAATTCT
AAGAAAATATATAAATATTACTAAATTTCTATATAGGGTGAGTGTGTCATAATATTATGA
CCAGAAAAGTTTCCCAGTACGATTCACCTATGGCAATTTCACTAAAATGCTCTAATAAAT
ACAATTGTATCTACTTAATAGTAAGAAAAATCTTTCTAATAGGTGTTCTTTAAACCCATA
ATGTAGGTGAACTTTCAAAAATAGATGCCTATTTTAATAAAAGCAGTTAAATATCATTGA
CACTAAGTAAAATCTGGTAACGGTCGATTATAGAGAACATTGGCGACGCTCTATAAGGAA
CTAATAGGTACGCAAATCTATGAAACTAGATCGTCAAAACCCTCTCCTTTCACACAACAT
TCGACAAAAAGTGAAATCCTAGTAGATACTTCTGGTAAATATAGTATGGGACGTCATAAA
TTGGACAGTTGATGTTTCCAGTGAAAAGGAAAACTAGAAATGTAGTCCTATTTACCGCAT
GAAGTTTCTACTCAAAAACTAATTCGGGAGGGGCAACACCAACATGTACGCACACAAAAA
GGCACGCTTCGAACCTAAATCTTCGAACACTAATACTCTCCCGAAACTATCGAAAAAATT
ATCAAAAATTCGCGAGTCTTTTAACTACAGTCTATAATGTCCGTGGTCATTCGTGGATAC
AAACCGACGATATTAAGTACTTGACGAGCTACCCAATACAATCAAGCCTTAAGTGCGTAT
TGTACCAACTCTTAGCATAGAACCGACATGTTTTAGTTTAAATTTTCAAGCCTAGTTTAA
TGGGGCTTGTTATATTACAATACGCACATCGAACTGCTGACGCAAGCACAACTCAAATCG
AATGAATTTTAGACCCCGAATGCAAATCTTCCACAAGTAGAAAGTATAATTGGTCCTCTA
AATTTAATATAGAAAAATAAGTCTCGGGCGATTTGCTACATTTACACAGGGAAAAAAATC
AGCCTCTGTGTTTTAGAGTCTTCGATTCTAAGTTATTTTGTATCTTAGTTGCAAATCGCC
AACGACACCAAAATTATCGCTAATTCACACCAAACCACAACGAAATTAAACAAAAACATC
TACATACACACAAATCTAAATTATATTTTCTGTGCATATAAAACCTTGCCAAGAAAAATT
TAACTACAAATTTTTAAAAAGATCAACATGAAGTTGTTGTATATTATGCTATTTATAAGA
ATTTTATTATAATTAACACGGGATAAAGATTGGCACAGGAGTAAAACTGATAAATAGCTA
TTTTGTTAGGAACATGTCTGATGCATCAAGAGTTTTGTGCACTTTCTCAAATTCTTATTA
GTCTTGCTCCTGTGTCATTCTTCAGTCCTTTTCTAATTAAATTATCATTATGTAAATAGT
AATAAAATCCAATTTCACTAATGCAACTAAGTTCAATCACGACAAAACAGAGTCGTTTTC
GAACTAATTAATTCACTACGCCTATACAAATATATTGCTTTTCAATTTGATTTAAATTTT
AGATAAAATTACAATTTAATGGTGTCGCAACACAGAGCTCAAACTCCGTACGTCGCCGAT
CGCGATCCAGCAACGGTTTTATACGTACAAAACATTAACACTAAAAATCTTCGAAACCTA
CTGTCTATTGCACTATCCCGGCGATTCCAAAGTATATTTCATTAATTATATATTAAAATA
TTCTACATAAATAAAAAAAATCTACAGCCCAATTATTGGTAACAACAAAACTGACTCGTT
TTTAACGACGAGGTCAAAAGTAAAATTTTAAAAGTATTAACAAAGTCTGCGGAAATTCAT
CTCGTTGTCACAACGTGCCTCAATTTTGTACTAACGCTTCCCCATATTACCGCCTCCCAG
AATGAAACTTAATCAACAGAAAATAGAAGTTGGGTGTCTCAAGTCTTATCGTATTTTTTG
TATGGAAACTCTAGGAAAATTACCATCTTGTAAAGTTAGTAGGTTTCCATTTCGATGTAG
GAACTCTTTCAGTTTTATTTCATGCAAATTATGTATAATTCTGAAACTATAGAAATAAGT
ATATCAAAATACGATAAAACTTCAAACCAATTGATAATTCACGTTGATTGCCCGAGACAG
ACCTTGAAAGGAATATTATTTAGTTTTTGGTTCCATCAACAAACATTGGCCCAATCAACG
TTAAAAAGTCCCAACCCGTTTAAAATAAAACAAATAACAATCATAGAATATTCGAGAACG
CACCAACGTTCCAGTCGACAATACCGAACGAAAAACAAAACAAACAAAGGAATTTATACT
AACTACACAGGTACAGTTTTTGATATTTTTTTTCTAAAGAGCATCACGTGATAATACCAA
AGTCTAAAAGCCATTGAAATTGTCTTGTTTAAAAGACTAGTGTTGCACAATCAGATGCAT
TTTCCCGTAATGCTCTTTAAAAAAGTAAAGAAATCAAGAGAACTGTGTCTCAATATTAAA
TACCTAAACGCACGAACAAGTTAAGTGCGATTGGTCGCAATAATCGACGAACGACAAAGA
CAAACTGCTAGCCAATATCAGGATACATTCTGCTTATAATCAAACCATCTCACCAAACTC
GCTCTCGTAAACTACCAAATGAGGAATTTCAAAATACGGCCATATTTAATGTCGAAAGCG
AGTACATGATAAAATGGTAGTATTGTACTTGAATCTACGTTTTGCTTAAGATTAATAAGT
AGTAAATAATGTAGCAATTGCGACGCGAAACAAGCGTCGCCATATTTTAAAACGTCACGT
TGTCATTCGCGAGTCACGTCCGTGATAATGTTGCAGGGTTCAAAAATTTCTACTAAAATC
GTAGTTCCATGGTATTGTCAGTTGAAAATGTTCGAAAAGGATACAGTATCGAAAATTAAA
ACATTAACTGCATTTTAACTCTGCAACGATCTTAATTAGTATTTAATTTTCGAAACCGAA
CCTTTTCGCAAATTTTCACCAATCGCAAACAAACTTTACGATTAGATGAAAAGTTGGACA
TTACAAAACCCAATAATAAGTAAAACAAGACAGTTACATTGAGAAGCCACTCACAAAATA
ATCGTAACTGTGTAATTTTCAGTTTCTGTAGCTTGCTAAATAAGTGTTGCCAAGTTTTAT
AAATATTTAGCAAGTAGATTCTCATTGTAAAGTCGTGTGACGCGTTAGTTGTCGACAGTT
GCAGTTAACCTGTAAGTAATGTAGGTAGACGCGGCTGTTTGTTGTCGTTTCGTTGTTAAC
ACCAGCGGAAGGGCACGGCGCGCGGTCGGTCGGCGCCTTCCTTCACCAGCGGCTTGTGGA
ACTCGCGACCGGGACGAGAGTGGATCGTCGCCCAGCAGTGCTCGCAGTAATACTGTAGAC
AAGTAACGTTGGCGCAAAAGAATGGCGCAAACTTAGAGCCGCACCTCGCGCCGGCACATT
CATCACACATCTGGTCGTCTAGAACGTACGGCTTCACCTCAACGCGCTTGTCAATGTCGC
CATGTTGGAGTTGCACAAAGCGCGCGGAAATGGCCGCTATGTAAGACTGTTGGTTCGAGA
AGGCAACTCGACCTGCGCCCTTAGGATACTTCAGTTCTGGATCAGTGTCTATTCCAGCGT
AACACACTCCACCGTACAGCCGGTCCATTATCATCGCTAGCTCAACAGCTTTAAGCGGAC
GCGGCACTCCTCCAACAAAGACCGTCTTCCTGGGATCGAGAGGCATGCTCGCGTCCAGCA
CAAAGTCCGCATCAGCCAGCCTCCAGGGTCGGATCTGGACCGGTTTGTCACGGATCGTGG
GCGACGACACGCATAGATACAGCTTGTCCTCGTCCGTGATGCACGCCTCCATCAGAGCCG
CTACTGAACTCTCGTCTTGGAACAGTAAGAAGGCATATCCTTTGGGCGGAAAGTAGCTTT
TGCTCTCGGCCTTGTGCGGCCAGTCCACGACCAAAGGCCCGAAACGACGAAACGAAGATG
TGATCTCATCTTCATCTATATCCGGGGGTAGTCCACCGACGAACACTTTACGGCTGAACC
TCTCTCCGTGCTCGGAGCCAGCGGATACGGGCGACGACCGTGCTGGAGACCCCAGAGCGC
TTACACACATAGACAAACCAGCAGCACTGAGCCTGGTCACGACATCCTGCGTCTGATCAC
CGGCGACGGCTGGAGACCCCGCACCGGCTGCACCCGCGGCTTCCTCCACTCCCGGGAAGA
AGGGCGACTTGCTTTTCATATTATTATCGGATGTGTCAGCTCTCATTATGTCTGTGAGGT
AATGTTCTAATGAACGCATATTGTCCAAGCCTCCTCGGTCCTGAAATCCTTCGTCGGGCT
TCCCTGGGTAGGACACACTCCGCCTGTAGTCGGGCGGTCGAGGCGGGGCGGGCGCTCTCC
GCCACGGGGCGAAGGCCGAGGGCTGTGAGGGCGCCGGGGAAGGCCACCTGTACTGCGGGG
CTCGCCTGAACGGGGCACGGTACTGTCTCTCGTCGTCCGTGACGCTGGCAGCGCCCGGGT
ATTGGAGTTCACCCATCTAAGACCGGCCGTCGCGGCGGCCTAGCGAACACT
(8211 bp)

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