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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26929_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cytoplasmic_polyadenylation_element-binding_protein_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0007291 P sperm individualization
GO:0007616 P long-term memory
GO:0008049 P male courtship behavior
GO:0008135 F translation factor activity, RNA binding
GO:0008356 P asymmetric cell division
GO:0017148 P negative regulation of translation
GO:0043022 F ribosome binding
GO:0043679 C axon terminus
GO:0044292 C dendrite terminus
GO:0044297 C cell body
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:1990124 C messenger ribonucleoprotein complex
GO:2000766 P negative regulation of cytoplasmic translation
Transcript
Level		FPKM:0.49 TPM:0.41
ORF EntryO_TrvaMG14999_complete:A_TrvaMG_comp26929_c0_seq1
Sequence
(Nucleotide)
GTGATCCTTTCACTCATCATCGAATGCTAAACTTAAACTCAATCAGCCTCAAGGTACAAT
AGTCTGGTTCGATTTTGCAAAACATAGTGATCCTTTCACTCATCATCGACTCCCTTCAAT
CCGTGGCTCATTTTAGCTAAATTTCAAAATTCAATCCTATGTTTGATCGACAAGCAAAAA
GACCATGACATTTTGCTGTTTGGTGCTTATCGCTAGAGGAAAGCTTAAAAATTAATCTTA
ATTACATATTTTCTCACTAAGTTGTCACTAGGTAAAATTGTTTTAAGAAAAAAACTAAAT
CGAACCAAACAAAATACCTATACGACTGTTGCCAATGAAATAAATAGGATCATATTGAAC
AAAATTGATTCTATTAAACACTTGCCAGGAATAATGGATCTAAAAAAATATATTATAATT
TTTAGTTGAAGTTAAATTAATAATGTCGTCATCTCGAATCTAAAACATTCAATACGGAAA
ATCAACTTTATGTACACCGTTGCTCGGCTGAAAAGCACAATTATTATTTGCTTTCGAAGC
AACAAAATTAGTAATAAAAGTTGATCTTCAGTAAATTTAAGTACACATCAAATTGCAAAT
CATTATCGTTAGAGACGACGACTACAAAAACTTGGTAAGAAAATAATTTTAAATGCACCA
TTCGCTGCGTGAATCTTTAAGAAAATTCAGAATTATTAGAAAATACAGTGAAAAAACCCT
CAATAAAATCACTAGATGTCAAGTCTGATAGCTGCCTAAAATAGTATAGCATTGTAACCA
AATAGCAACACTGCATTCCCGGCTGTCAAGACTTGAAACCTCGCGCGCTGTAACGGTGCG
AACCGATGTTAAAGTAAACAAAGTAAAAACATTTGTCTAATTTCAATACTCATTTAGATA
CTATTTTTATTTAATTTTCAAATACTCAACTAGTTAATGAATCTACACTTTTCTATCTTC
GTATTATTTATTTAAGTATATAAATCGTTCAAATTTTCACTAAAATATTCTAGCACGAGA
GAACATTGGTTTCTCGTTCGCGCAAACGCTAAATACGAAAAATTCACTAATACGCCGATC
CGCTCCGATTTAGAAGTATCAAAAAAATTTACTTTTTTTACGGTTTTTAATTTTTTTTTC
TAGGAAATCCAACGATTCTATGTACATGCAAGTGAAATGGTGCGAAACTCTCACTCAGAG
AACGACGAGGGGACGTACACTTTCATAACAACAACAATTCGAAAGTTCATTTTAGCTAAA
AAGTACAAATTTCATTTCAAAAAATGTATATATAAGAAATTCTTTAAATATATTAAATAC
AATATTATAATAATTATACGTATGACAAACTGCCCCCCGCAGTGCGAACTTCACTCTGTG
ATATGCCATACAAAATTATCCAAACAATATTCATAATAATATTACACACATAGATAAACA
GACAACATACAACAATAAAGGAGGGAAACGATAAAATATCGAAACGACCAGCGCCCTCGC
CGAAACGTGCCTCAATTTTTCCATCGCAGCTTCAACACCTCCAATAAACCGCTTTAGAGC
GAATAAATAAAAAGGAAATAAACGAACCTACAAACTAACAAGACAAGCCTCGCAGTGGAA
AACTTAAACATCCCTCGAAATTAACTGAAAAAGACCATTCAAAATTCTATGACAAAAACT
GCGAGACCAAGTAACAAATTCAAAAAGCGGGAAGAAACTTTCCCCCGTGAATGTCAAACG
TAAAACAATACAAATATCTTCTAAACAGTAGTAAGCCTTTAGCTTCTAGACGCCTCTCAT
CCAACGCCCGCAGAATCTTTTCAGAATATTGAACCGACATCTCCTTACTCGCACATCACA
TCAATGGGAGAATTATTTCCATTCATTTAAACAACCGCATCCACAAAGCGTATCAACGCC
GCGCGTTTCAAAATAAAAAGAATCTCGTCCGAATCATATTTTACACAATCATCGATTTTT
TTTATAAAAATACAAAAATACAAAATGGGATAGTGCTATACGACACACACACAACACACT
CAAGCGTCTCGCCACTGTTTATTTTCAACTAGGAGGTTAGGGGGCATGAATTCGACAATA
AATATTTGAGCAATCCCACTAAAATAAAGAGTAATGACTGGTAACGTAACTACCTAATGC
ACGCACAAACCCCGGAAAATCAAAGTGTTGCAAGGAATAAATTTTAAAATCTACTACAAA
AATAATGTGTTGAGTGAGAACAAGAATGATCGCGTCCACATCGCGTCGCATCAAGTATTT
TATTAAATAAAGAGCGTTTATCAAAGGCGTGATTTTAAAAATTTAATCTATAGTTAACTT
TTAATTAATTATTACGAGAAAAACTTGCACATACGCCACTCGTATTTACCAAAACAAACT
ATCAATTTCACTACAGCGGCGTCAACCGCGTCCACACGCGTACTGTGAAACTTTTCCTAT
TGAAACTCAACTATAATTAAATTATCTAAATTCTAAGAAAATATATAAATATTACTAAAT
TTCTATATAGGGTGAGTGTGTCATAATATTATGACCAGAAAAGTTTCCCAGTACGATTCA
CCTATGGCAATTTCACTAAAATGCTCTAATAAATACAATTGTATCTACTTAATAGTAAGA
AAAATCTTTCTAATAGGTGTTCTTTAAACCCATAATGTAGGTGAACTTTCAAAAATAGAT
GCCTATTTTAATAAAAGCAGTTAAATATCATTGACACTAAGTAAAATCTGGTAACGGTCG
ATTATAGAGAACATTGGCGACGCTCTATAAGGAACTAATAGGTACGCAAATCTATGAAAC
TAGATCGTCAAAACCCTCTCCTTTCACACAACATTCGACAAAAAGTGAAATCCTAGTAGA
TACTTCTGGTAAATATAGTATGGGACGTCATAAATTGGACAGTTGATGTTTCCAGTGAAA
AGGAAAACTAGAAATGTAGTCCTATTTACCGCATGAAGTTTCTACTCAAAAACTAATTCG
GGAGGGGCAACACCAACATGTACGCACACAAAAAGGCACGCTTCGAACCTAAATCTTCGA
ACACTAATACTCTCCCGAAACTATCGAAAAAATTATCAAAAATTCGCGAGTCTTTTAACT
ACAGTCTATAATGTCCGTGGTCATTCGTGGATACAAACCGACGATATTAAGTACTTGACG
AGCTACCCAATACAATCAAGCCTTAAGTGCGTATTGTACCAACTCTTAGCATAGAACCGA
CATGTTTTAGTTTAAATTTTCAAGCCTAGTTTAATGGGGCTTGTTATATTACAATACGCA
CATCGAACTGCTGACGCAAGCACAACTCAAATCGAATGAATTTTAGACCCCGAATGCAAA
TCTTCCACAAGTAGAAAGTATAATTGGTCCTCTAAATTTAATATAGAAAAATAAGTCTCG
GGCGATTTGCTACATTTACACAGGGAAAAAAATCAGCCTCTGTGTTTTAGAGTCTTCGAT
TCTAAGTTATTTTGTATCTTAGTTGCAAATCGCCAACGACACCAAAATTATCGCTAATTC
ACACCAAACCACAACGAAATTAAACAAAAACATCTACATACACACAAATCTAAATTATAT
TTTCTGTGCATATAAAACCTTGCCAAGAAAAATTTAACTACAAATTTTTAAAAAGATCAA
CATGAAGTTGTTGTATATTATGCTATTTATAAGAATTTTATTATAATTAACACGGGATAA
AGATTGGCACAGGAGTAAAACTGATAAATAGCTATTTTGTTAGGAACATGTCTGATGCAT
CAAGAGTTTTGTGCACTTTCTCAAATTCTTATTAGTCTTGCTCCTGTGTCATTCTTCAGT
CCTTTTCTAATTAAATTATCATTATGTAAATAGTAATAAAATCCAATTTCACTAATGCAA
CTAAGTTCAATCACGACAAAACAGAGTCGTTTTCGAACTAATTAATTCACTACGCCTATA
CAAATATATTGCTTTTCAATTTGATTTAAATTTTAGATAAAATTACAATTTAATGGTGTC
GCAACACAGAGCTCAAACTCCGTACGTCGCCGATCGCGATCCAGCAACGGTTTTATACGT
ACAAAACATTAACACTAAAAATCTTCGAAACCTACTGTCTATTGCACTATCCCGGCGATT
CCAAAGTATATTTCATTAATTATATATTAAAATATTCTACATAAATAAAAAAAATCTACA
GCCCAATTATTGGTAACAACAAAACTGACTCGTTTTTAACGACGAGGTCAAAAGTAAAAT
TTTAAAAGTATTAACAAAGTCTGCGGAAATTCATCTCGTTGTCACAACGTGCCTCAATTT
TGTACTAACGCTTCCCCATATTACCGCCTCCCAGAATGAAACTTAATCAACAGAAAATAG
AAGTTGGGTGTCTCAAGTCTTATCGTATTTTTTGTATGGAAACTCTAGGAAAATTACCAT
CTTGTAAAGTTAGTAGGTTTCCATTTCGATGTAGGAACTCTTTCAGTTTTATTTCATGCA
AATTATGTATAATTCTGAAACTATAGAAATAAGTATATCAAAATACGATAAAACTTCAAA
CCAATTGATAATTCACGTTGATTGCCCGAGACAGACCTTGAAAGGAATATTATTTAGTTT
TTGGTTCCATCAACAAACATTGGCCCAATCAACGTTAAAAAGTCCCAACCCGTTTAAAAT
AAAACAAATAACAATCATAGAATATTCGAGAACGCACCAACGTTCCAGTCGACAATACCG
AACGAAAAACAAAACAAACAAAGGAATTTATACTAACTACACAGGTACAGTTTTTGATAT
TTTTTTTCTAAAGAGCATCACGTGATAATACCAAAGTCTAAAAGCCATTGAAATTGTCTT
GTTTAAAAGACTAGTGTTGCACAATCAGATGCATTTTCCCGTAATGCTCTTTAAAAAAGT
AAAGAAATCAAGAGAACTGTGTCTCAATATTAAATACCTAAACGCACGAACAAGTTAAGT
GCGATTGGTCGCAATAATCGACGAACGACAAAGACAAACTGCTAGCCAATATCAGGATAC
ATTCTGCTTATAATCAAACCATCTCACCAAACTCGCTCTCGTAAACTACCAAATGAGGAA
TTTCAAAATACGGCCATATTTAATGTCGAAAGCGAGTACATGATAAAATGGTAGTATTGT
ACTTGAATCTACGTTTTGCTTAAGATTAATAAGTAGTAAATAATGTAGCAATTGCGACGC
GAAACAAGCGTCGCCATATTTTAAAACGTCACGTTGTCATTCGCGAGTCACGTCCGTGAT
AATGTTGCAGGGTTCAAAAATTTCTACTAAAATCGTAGTTCCATGGTATTGTCAGTTGAA
AATGTTCGAAAAGGATACAGTATCGAAAATTAAAACATTAACTGCATTTTAACTCTGCAA
CGATCTTAATTAGTATTTAATTTTCGAAACCGAACCTTTTCGCAAATTTTCACCAATCGC
AAACAAACTTTACGATTAGATGAAAAGTTGGACATTACAAAACCCAATAATAAGTAAAAC
AAGACAGTTACATTGAGAAGCCACTCACAAAATAATCGTAACTGTGTAATTTTCAGTTTC
TGTAGCTTGCTAAATAAGTGTTGCCAAGTTTTATAAATATTTAGCAAGTAGATTCTCATT
GTAAAGTCGTGTGACGCGTTAGTTGTCGACAGTTGCAGTTAACCTGTAAGTAATGTAGGT
AGACGCGGCTGTTTGTTGTCGTTTCGTTGTTAACACCAGCGGAAGGGCACGGCGCGCGGT
CGGTCGGCGCCTTCCTTCACCAGCGGCTTGTGGAACTCGCGACCGGGACGAGAGTGGATC
GTCGCCCAGCAGTGCTCGCAGTAATACTGTAGACAAGTAACGTTGGCGCAAAAGAATGGC
GCAAACTTAGAGCCGCACCTCGCGCCGGCACATTCATCACACATCTGGTCGTCTAGAACG
TACGGCTTCACCTCAACGCGCTTGTCAATGTCGCCATGTTGGAGTTGCACAAAGCGCGCG
GAAATGGCCGCTATGTAAGACTGTTGGTTCGAGAAGGCAACTCGACCTGCGCCCTTAGGA
TACTTCAGTTCTGGATCAGTGTCTATTCCAGCGTAACACACTCCACCGTACAGCCGGTCC
ATTATCATCGCTAGCTCAACAGCTTTAAGCGGACGCGGCACTCCTCCAACAAAGACCGTC
TTCCTGGGATCGAGAGGCATGCTCGCGTCCAGCACAAAGTCCGCATCAGCCAGCCTCCAG
GGTCGGATCTGGACCGGTTTGTCACGGATCGTGGGCGACGACACGCATAGATACAGCTTG
TCCTCGTCCGTGATGCACGCCTCCATCAGAGCCGCTACTGAACTCTCGTCTTGGAACAGT
AAGAAGGCATATCCTTTGGGCGGAAAGTAGCTTTTGCTCTCGGCCTTGTGCGGCCAGTCC
ACGACCAAAGGCCCGAAACGACGAAACGAAGATGTGATCTCATCTTCATCTATATCCGGG
GGTAGTCCACCGACGAACACTTTACGGCTGAACCTCTCTCCGTGCTCGGAGCCAGCGGAT
ACGGGCGACGACCGTGCTGGAGACCCCAGAGCGCTTACACACATAGACAAACCAGCAGCA
CTGAGCCTGGTCACGACATCCTGCGTCTGATCACCGGCGACGGCTGGAGACCCCGCACCG
GCTGCACCCGCGGCTTCCTCCACTCCCGGGAAGAAGGGCGACTTGCTTTTCATATTATTA
TCGGATGTGTCAGCTCTCATTATGTCTGTGAGGTAATGTTCTAATGAACGCATATTGTCC
AAGCCTCCTCGGTCCTGAAATCCTTCGTCGGGCTTCCCTGGGTAGGACACACTCCGCCTG
TAGTCGGGCGGTCGAGGCGGGGCGGGCGCTCTCCGCCACGGGGCGAAGGCCGAGGGCTGT
GAGGGCGCCGGGGAAGGCCACCTGTACTGCGGGGCTCGCCTGAACGGGGCACGGTACTGT
CTCTCGTCGTCCGTGACGCTGGCAGCGCCCGGGTATTGGAGTTCACCCATCTAAGACCGG
CCGTCGCGGCGGCCTAGCGAACACT
(7045 bp)

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