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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26928_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)		DnaJ_(Hsp40)_homolog_4_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
GO:0016234 C inclusion body
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030544 F Hsp70 protein binding
GO:0031398 P positive regulation of protein ubiquitination
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0042026 P protein refolding
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
GO:0070628 F proteasome binding
GO:0090084 P negative regulation of inclusion body assembly
GO:0090086 P negative regulation of protein deubiquitination
Transcript
Level		FPKM:11.08 TPM:9.33
ORF EntryO_TrvaMG14998_complete:A_TrvaMG_comp26928_c1_seq3
Sequence
(Nucleotide)
GGGAGAACCCAGAGAGATGGTGGGGGAACACTGAAAGTTGAAACCAAAAAATTAAAACAG
ATTTTTCATGACAAACGGCTTTAAATTTTCCATTTACAACTATAGGAGCATAGAAAATTA
TTGAGTGAATACTTTACGAGTGTAAGCGCCCCAGTGAGGGAGAACCCAGAGAGATGGTGG
ACTATTACAGGGTACTTGGTGTCACTCGAACTGCTACAGAAACTGAAATAAAAAAAGCGT
ACAGAAAACTAGCATTAAAATGGCATCCTGACAAAAATCCAGACAATTCCGATGAGGCTA
ATAGAAAATTCAAAGAAATTTCTGAAGCTTATGAGGTTCTTTCAGATGAGAGAAAACGCA
GGGTGTACGATCAATATGGCAAAGAAGGCCTGAACAATGGAAGAGGGCGTCGCTCAGCTG
CAGACGACGACTACGAATTCGGCTATGCCAGCTTCCCATTCACATTCCGAGATCCCGAAG
AAGTATTCAGAGAATTCTTTGGCGGCTCTTCTTTTGGAGATTTGTTTGCTGAAATCAATG
GTCACGGTCATCACGGCGGGAGGCACGGGAGACGGAGTCACCCGAGCACGTCCCTGACGT
CATCCCTGTTCAGTCCGTTCGGGTTCGGGATGCAGGGGCTCGACGACATCTTCGCTCACA
CAAACGGGAACACGTTCACGTCGTTCTCGACCTTCAACAGCTCCCTGGCGGGCCCCGGCA
GCGCCAACATGAGGAGCACCACCACAACCACACGAGTGGTTAATGGAAAAAAAATCACAA
CTAAAAAAGTCACAGAGAATGGACGAGAGACAATCATGTCTTACGAAAACGGGGTTCTTA
AGTCAAAGACTGTTAATGGAGTACCTCAATCACTAACGTACAGTTAATTTACTTTACTTT
TGTAACCAAATTTAATCCAAATGTTATTTGTATTCGACGTAAAGCGATGTACGAGAGTTC
CGATTATTTTTACTTTGCTTTTAGAGTTTAGCATTCTATACTAAATTGAAAACTAAAACT
ATTATTAGAGGTAGATATACATACTGCTTTTGAACTTACAACAAAGTAAAAGCAAATTAC
AGCTCAACATATCTTATAGGTTTAATTATTTCGCCATTGACCTACCTATTCGATCGAAAA
TAAATTCATGTGATTTTTATAATCGCTATTGCGACGATAACATTAATTTGCTGCCAATTT
TATGTTTATTTTAGTATCTAGATTTTAAAAGTGTTTATCACATTCATTTTAGATTAGCAA
ATGTTGGAACAATTACTTTAGATGCCCAACTATCAGTGAGCAATTAAATAATTTCAGATT
ACGTAATTATCTGATAAAGCATTTTCCTTTTGTATTGTTATGTAACGTAAGAGGGTATAA
GAAATTCCTACATTTTAGCACAGTATACCTCTTTATGTGCAAATTAAATAGTATGATTTT
GAAAATTATTATGCTAGTGATTGTTGCACTATCGGTTTTATGCTGGTATTTCTTGTGTTT
AAAGAAAAAAAGAATAAGGTATAAATTACTTTATTTGGTTGTTTTTTGCATCCATTGTAT
TAATTAAACAAAAAACACCTCGTGTAAATATCAGCATAATTAAGCGATACCCTTAATATC
GGACGAATTAATTACAATTAAAATATCAGAACTAATTCCATTATAGAAGAATTGATAGGA
AGCCCAACTAAAAACTGCGAGTGCTCATAATAAATAATAATTTTATGTAACGTGGTGAAT
TTAATACAATCTTGCACAATTTACCCGTCACAAAACAACAAACAAACAAACATTAACAAA
CTTTTTTAATTGTACTCAATTTAAATTTGAGATGAAATTATTATCCTAATTATTTTGTTA
CAGGCGAAAGCTTTAAATGGTATAATGCTAAACGTAATCATAATGCAAATTTTCTAGGGC
AAACTTATTTTTTAAAATGTAAAATAAAGTCTGCATTTGTGTTTTGGAAACACTTAAATA
ATAAATATGCTTTTCGCTGTAATTAAAGCGGGGAATGTATTTTTGTAATGTGCAAAAAAT
GCTTATATAAAATCACGATGTGAATTAGTAGTATTATAATAACTCGTTTGTTTCCTGTTA
TTTTATCCTTTTTTGTTTCGAAATAAATAATCATCATTCCTGAATAAGAACACGAAAGGT
ACAAATTTTTTCTTATTTTTAGGATATTTTTAT
(2193 bp)

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