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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26924_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:0.14 TPM:0.12
ORF EntryO_TrvaMG14906_complete:A_TrvaMG_comp26924_c0_seq3
Sequence
(Nucleotide)
TCACCAATCAACTTGAGGAAAAGGTGAGTAACTATTTTACTTTTATTTATATGTTTTTTA
CATGTCTATAAAAATGTAATCATTGCAGTTTCTTTTTAAAATGATACAAGTACTGTTGTA
GTAGTTTATTATATTTCAATCATATATTTGTGTTATATGTGAGCTAAAAGAAACTGCAAT
TGAAATATAAATGTAATATGTAATTGATTGCGTATGGATATTTTTATGGTCCCCACCGGT
TAGCGCGCCGTCGAAGTCATCCCCGCAAGTTGGTGCCGACTCCCGGACGCTGCCAGCTAG
CTTCGCTCTTTGGAGGCCTTAGCATATCTGCGGTATTTACGGGGAAAATTAAATAATTAC
AAGATAACTCATAATTAAATGAAGAAGAGTTTTCTGAAAGGGAAATTTAACTCATATGCA
TAAAATAGTTTATCAGTTCCCCAAAACCATTAAGAGGTGATTTGACTCAGGGCAAGGAAG
TGTTGTCGTTAGGCTTTGCGTTCAGCATAATGTGGTTGTGTTCGCAACACCCTTACAGAT
GCAAGTTGTCGAAGAAGGCGGAGAGCGGTGCGCGGGTGTCGGCGCGCGGCCATGTGCGGC
CTCGGCTCCGCGTCCCGCCGTCGCCGCGCTCCTCCCGCCCTGTCCTGCGCTCCGTCGCCA
CTCGACACGATACGAAGACTTAACACACAAACATGAAACATCTCACACTATGTATATTCA
TGTTGCTTCCTTACCTGAGTCATTTCGGAACTGTTTCTTTAATTATTGTTTAAATACACA
TAACACTCTTAATGGTTTTCATTATAGTTTCCGACAAAGTTTGATTTTTCGTTTTTTTTT
ATTTAGAAGTGGAATGATTTTGATTTGATTAAAATGATAATAAAGCCGAGTAGGACATGG
TATAAAAGCTTTATCCCAGTAATCAAGGAGATCATTGTTTGTGTTATTATTAAGCATTCT
AGATTTTAATCGGATATTTTTTCTTTTCCTCATCCAATCCATAATGGATCCTAGTTCCCT
TGCCCAAAGAAAATGCAGATCAACTTGACTGGATTTTTGAACGGAAAGAACGCGCGTCTC
TTCATGGGCGAGCTGTGGGAGCTGTTGCTGAGTGCGCAGGCCAGCGAGAATGGGATACCT
GAGTCCTTCACGCAACAAAAGAAAGAAGAAATTAAGAAGAGAATGGAAGAGCAGCAGAAC
AAGGACAAGGACAAGGAGCGGCGCAGGTCTCGGTCTCGCTCGCGGTCGCGTCGCCGTTCC
CGCGACCGACGACGATCCAGGACGCGCTCCCGAGATCGATCCAGCGATAGGAAGCATCGC
AATGGCGGAAGTCCACGTCGGTCGAGGCGTCGCAGTAGCCCCATCAGAGATAAGAGTCCA
CCAAAAAGTGAACCAGAACCCAGAGCACCAAGTGTAGCAGAGAATGGTAAGTCACCAGAG
AAGAAGGATGATGATGTAACAGAGGAACCGATTCAGAATAACTCATTGACTGTTAATGAT
TCTGTTAACGATGACAAGAAGGAGCCAATAACCGTGAATATTGACGATGATAAACCAGAA
GATGGAGGACAAAAATCTAGATCTGTTTCACCAGCTAAGTCGGTTGACGAGAAGGATAAA
TCAACTGAGGAAAAACCTGCGGAAAAATCCCGCCGATCGTCGAGCGAACGGCGATCGTCT
TCTGCTTCATCTCGTGGTAGCATAAAGAAGAGATCTTCACACAAGAAACGGCAGTACCGT
TCTAATCGCGACTCGTCAACAAGTGTTAGTCCGAGACGCAGCTCTCGCAGGGAAAGGAGT
AAGTCTCGTCGTAGGAGCAGTCGTCGCAGGTCTCTGGATCGTCGCGAGAGGGAGAGGGAA
CGTGAGAGGGAAAGAGAAAGAGAACGAGAAAGGGAACGCCGGCGACGAGAACGAGAGAGA
CGGGAGAGATCTCGCGATCGTCGTCGGTCTCGTTCACGTCGCAGGTCGCGGTCGCGTCGT
CGCTCCGGTCGCAGGTCGCGTGACCGACGCTCGCGGGACAGACGCTCTAGGGATCGCCGG
TCCAGAGAGAAATCCAGAGAAAGGAGATCACGCGATCGCTCCAGGAGATCGAGAGATAGG
AAGTCTCGCGAAAGGAGATCCAGCGACATAATTAAGGAACGCTTGGAAAAATCTGTCTCT
ATACCCAGGAAGGAAAACCTTGATAAGGTACCAAAGAAAGTGGAGCACGTGGTTCAGCGT
GAACAGTCTAAGGAGCGTATCATATCTAGTACAAGTCGGGAATCATCAGTAGCCGTCGAA
AAACCTCCTCCAGAACCTGTAAACGATGGGAAACCGCAATCAGACCACTCTGATGACGAG
GAAAAGGAAGATATTGTCAACATTCCGAATTTGCGCGAATATTCCAAGAGCCTTTCACGC
ACTCCATCGCCCTTCCTTCGAAAACATGAGGTTGACAAAAACAAGAAATCTGATGATGTC
TCAGGTAAAGAGCCAAATGAAGACGAAATTAAAACGAAAGAATCCAAGCGAGGGAAACGC
AAACCTCATCAATCTGATTCTGAAAGTGCCACCAGTGAAGAATTGTCGAAATCAAAAAGC
AAAGCTAAAGTCAAACGTAAAGAGAAAGGTTCATCTAAAAGAAATAAGAAACCAAAGAAG
GAGAGCTCTTCTAGTGATAGCGATTCCGAAGATTCTTCTTCTAGTGACTCTGAGGAAGAT
AGGAAGAAGAAAAGCAAGAAGAATGCCAAAAAGAAGTTGGCTAAGAAATCTAGGAAGAAG
AGAGCTCGCTCTTCAAGCTCAGACTCCAGTTCCGAAGAGGAAGTAAAACAAAAGGGATCA
AAGACTAAACAAAAGAATTTGATTGAGGAATCGGACGTTGATAAAAAAGCTAAAAAGCGC
ACCAAGGACGTAAGCAGTGAAAGGTCAAGGTCGGAGAAAATTGACAACAAACCCACCAAA
TCCAAGAAAAACGATTCTGAAGATTCTCACGATGATAGTTCTGATACTGACGCTAAATCT
AAAAAGAAAATCACTAAACGTGACACGTCTAGCTCTGAAAAAGATCCAAAACGTGGTAAA
AAAGTTGAACCGAGCAAGGAGAAAATTTTATCACCTGATGTTGGCAAACTAAAAAAAGTA
GAGGACAAACCGACGAAACCTAAAGTAGATGATGCTAAACCTAAGCCAAGAGACGAAACC
GAGAAAAGACCTAAGAAAAGAGAGAAGGACGATTCCTCATCTGAAAGCGACCAAGTGTCT
AAGAAGAAAATAAGGAAGAAGGTAACAGACTCAGAGTCTGATTCAGACAGTGATGAGCCT
AAGAAATCAAAGAAAAACAAAAAACATAAGAAGCATTCTAAGAAACATAAGAAACACAAG
AAGCATAAGAAATCCTCTAAGAAAAAGGAAGACTCTTCTGACAGCGACGAACCAGAAGAA
GAGGAAGAAGGAAAGGTTAACAATGAGGATTTGGAAAAAAAACTGCGCGAAAGAGCATTG
AAGTCAATGAAAAAACAAACTAGTGTGTCAGGGTCCGATTAGGATCCATATTTTTCTGCT
ATTTGATTAAAAACTTTGTCATTTTCATTAACTTACGACATGTTTTAAAGAATAATTTAA
TGAATTAGCTGAAGCGATTTTAAGTAACGTGTATTTCATATTGTTAGTAATAAACAAGAT
ACAGTAAAAAAAA
(3673 bp)

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