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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26924_c0_seq18
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:2.27 TPM:1.91
ORF EntryO_TrvaMG14969_complete:A_TrvaMG_comp26924_c0_seq18
Sequence
(Nucleotide)
GGCGGCTTGAAGTGAAATCCAGAGGATTTTTATTGAATTGTAGTCATCGTTGGCAAAATA
CGCTAAATATAATTCACATTCAAAGTTAGATCCTAGTAATTTACCACCAACTTCAAAGAT
TAATTGAATAAATGCATAATTTCTGTTACCTGTGTGTAACTCTACCTATCTAAATGGTTT
ATCATTGGCGTCCTCACGCCTAACAACCGGGGCAACCCCCAGACATTTTCACCGAAGGAG
GTATTGATTTCTTCCTCGTCAAGATGATGATGTACACGGGGACTAGTACGGAGCAGGACA
CCCGCTTCAGCGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTTGGAGATTGTCTTA
CTCAGCAGGTTGACATGTCAAAAGTGAAGCTCGATGTGCTGAAGCCATGGATCACTCAGA
AGATCACAGATATCCTCAACATGGAAGATGATGTTGTCATCGAATATGTCACCAATCAAC
TTGAGGAAAAGTTCCCTTGCCCAAAGAAAATGCAGATCAACTTGACTGGATTTTTGAACG
GAAAGAACGCGCGTCTCTTCATGGGCGAGCTGTGGGAGCTGTTGCTGAGTGCGCAGGCCA
GCGAGAATGGGATACCTGAGTCCTTCACGCAACAAAAGAAAGAAGAAATTAAGAAGAGAA
TGGAAGAGCAGCAGAACAAGGACAAGGACAAGGAGCGGCGCAGGTCTCGGTCTCGCTCGC
GGTCGCGTCGCCGTTCCCGCGACCGACGACGATCCAGGACGCGCTCCCGAGATCGATCCA
GCGATAGGAAGCATCGCAATGGCGGAAGTCCACGTCGGTCGAGGCGTCGCAGTAGCCCCA
TCAGAGATAAGAGTCCACCAAAAAGTGAACCAGAACCCAGAGCACCAAGTGTAGCAGAGA
ATGGTAAGTCACCAGAGAAGAAGGATGATGATGTAACAGAGGAACCGATTCAGAATAACT
CATTGACTGTTAATGATTCTGTTAACGATGACAAGAAGGAGCCAATAACCGTGAATATTG
ACGATGATAAACCAGAAGATGGAGGACAAAAATCTAGATCTGTTTCACCAGCTAAGTCGG
TTGACGAGAAGGATAAATCAACTGAGGAAAAACCTGCGGAAAAATCCCGCCGATCGTCGA
GCGAACGGCGATCGTCTTCTGCTTCATCTCGTGGTAGCATAAAGAAGAGATCTTCACACA
AGAAACGGCAGTACCGTTCTAATCGCGACTCGTCAACAAGTGTTAGTCCGAGACGCAGCT
CTCGCAGGGAAAGGAGTAAGTCTCGTCGTAGGAGCAGTCGTCGCAGGTCTCTGGATCGTC
GCGAGAGGGAGAGGGAACGTGAGAGGGAAAGAGAAAGAGAACGAGAAAGGGAACGCCGGC
GACGAGAACGAGAGAGACGGGAGAGATCTCGCGATCGTCGTCGGTCTCGTTCACGTCGCA
GGTCGCGGTCGCGTCGTCGCTCCGGTCGCAGGTCGCGTGACCGACGCTCGCGGGACAGAC
GCTCTAGGGATCGCCGGTCCAGAGAGAAATCCAGAGAAAGGAGATCACGCGATCGCTCCA
GGAGATCGAGAGATAGGAAGTCTCGCGAAAGGAGATCCAGCGACATAATTAAGGAACGCT
TGGAAAAATCTGTCTCTATACCCAGGAAGGAAAACCTTGATAAGGTACCAAAGAAAGTGG
AGCACGTGGTTCAGCGTGAACAGTCTAAGGAGCGTATCATATCTAGTACAAGTCGGGAAT
CATCAGTAGCCGTCGAAAAACCTCCTCCAGAACCTGTAAACGATGGGAAACCGCAATCAG
ACCACTCTGATGACGAGGAAAAGGAAGATATTGTCAACATTCCGAATTTGCGCGAATATT
CCAAGAGCCTTTCACGCACTCCATCGCCCTTCCTTCGAAAACATGAGGTTGACAAAAACA
AGAAATCTGATGATGTCTCAGGTAAAGAGCCAAATGAAGACGAAATTAAAACGAAAGAAT
CCAAGCGAGGGAAACGCAAACCTCATCAATCTGATTCTGAAAGTGCCACCAGTGAAGAAT
TGTCGAAATCAAAAAGCAAAGCTAAAGTCAAACGTAAAGAGAAAGGTTCATCTAAAAGAA
ATAAGAAACCAAAGAAGGAGAGCTCTTCTAGTGATAGCGATTCCGAAGATTCTTCTTCTA
GTGACTCTGAGGAAGATAGGAAGAAGAAAAGCAAGAAGAATGCCAAAAAGAAGTTGGCTA
AGAAATCTAGGAAGAAGAGAGCTCGCTCTTCAAGCTCAGACTCCAGTTCCGAAGAGGAAG
TAAAACAAAAGGGATCAAAGACTAAACAAAAGAATTTGATTGAGGAATCGGACGTTGATA
AAAAAGCTAAAAAGCGCACCAAGGACGTAAGCAGTGAAAGGTCAAGGTCGGAGAAAATTG
ACAACAAACCCACCAAATCCAAGAAAAACGATTCTGAAGATTCTCACGATGATAGTTCTG
ATACTGACGCTAAATCTAAAAAGAAAATCACTAAACGTGACACGTCTAGCTCTGAAAAAG
ATCCAAAACGTGGTAAAAAAGTTGAACCGAGCAAGGAGAAAATTTTATCACCTGATGTTG
GCAAACTAAAAAAAGTAGAGGACAAACCGACGAAACCTAAAGTAGATGATGCTAAACCTA
AGCCAAGAGACGAAACCGAGAAAAGACCTAAGAAAAGAGAGAAGGACGATTCCTCATCTG
AAAGCGACCAAGTGTCTAAGAAGAAAATAAGGAAGAAGGTAACAGACTCAGAGTCTGATT
CAGACAGTGATGAGCCTAAGAAATCAAAGAAAAACAAAAAACATAAGAAGCATTCTAAGA
AACATAAGAAACACAAGAAGCATAAGAAATCCTCTAAGAAAAAGGAAGACTCTTCTGACA
GCGACGAACCAGAAGAAGAGGAAGAAGGAAAGGTTAACAATGAGGATTTGGAAAAAAAAC
TGCGCGAAAGAGCATTGAAGTCAATGAAAAAACAAACTAGTGTGTCAGGGTCCGATTAGG
ATCCATATTTTTCTGCTATTTGATTAAAAACTTTGTCATTTTCATTAACTTACGACATGT
TTTAAAGAATAATTTAATGAATTAGCTGAAGCGATTTTAAGTAACGTGTATTTCATATTG
TTAGTAATAAACAAGATACAGTAAAAAAAA
(3150 bp)

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