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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26924_c0_seq16
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:14.16 TPM:11.92
ORF EntryO_TrvaMG14962_complete:A_TrvaMG_comp26924_c0_seq16
Sequence
(Nucleotide)
GGCGGCTTGAAGTGAAATCCAGAGGATTTTTATTGAATTGTAGTCATCGTTGGCAAAATA
CGCTAAATATAATTCACATTCAAAGTTAGATCCTAGTAATTTACCACCAACTTCAAAGAT
TAATTGAATAAATGCATAATTTCTGTTACCTGTGTGTAACTCTACCTATCTAAATGGTTT
ATCATTGGCGTCCTCACGCCTAACAACCGGGGCAACCCCCAGACATTTTCACCGAAGGAG
GTATTGATTTCTTCCTCGTCAAGATGATGATGTACACGGGGACTAGTACGGAGCAGGACA
CCCGCTTCAGCGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTTGGAGATTGTCTTA
CTCAGCAGGTTGACATGTCAAAAGTGAAGCTCGATGTGCTGAAGCCATGGATCACTCAGA
AGATCACAGATATCCTCAACATGGAAGATGATGTTGTCATCGAATATGTCACCAATCAAC
TTGAGGAAAAGTTCCCTTGCCCAAAGAAAATGCAGATCAACTTGACTGGATTTTTGAACG
GAAAGAACGCGCGTCTCTTCATGGGCGAGCTGTGGGAGCTGTTGCTGAGTGCGCAGGCCA
GCGAGAATGGGATACCTGAGTCCTTCACGCAACAAAAGAAAGAAGAAATTAAGAAGAGAA
TGGAAGAGCAGCAGAACAAGGACAAGGACAAGGAGCGGCGCAGGTCTCGGTCTCGCTCGC
GGTCGCGTCGCCGTTCCCGCGACCGACGACGATCCAGGACGCGCTCCCGAGATCGATCCA
GCGATAGGAAGCATCGCAATGGCGGAAGTCCACGTCGGTCGAGGCGTCGCAGTAGCCCCA
TCAGAGATAAGAGTCCACCAAAAAGTGAACCAGAACCCAGAGCACCAAGTGTAGCAGAGA
ATGGTAAGTCACCAGAGAAGAAGGATGATGATGTAACAGAGGAACCGATTCAGAATAACT
CATTGACTGTTAATGATTCTGTTAACGATGACAAGAAGGAGCCAATAACCGTGAATATTG
ACGATGATAAACCAGAAGATGGAGGACAAAAATCTAGATCTGTTTCACCAGCTAAGTCGG
TTGACGAGAAGGATAAATCAACTGAGGAAAAACCTGCGGAAAAATCCCGCCGATCGTCGA
GCGAACGGCGATCGTCTTCTGCTTCATCTCGTGGTAGCATAAAGAAGAGATCTTCACACA
AGAAACGGCAGTACCGTTCTAATCGCGACTCGTCAACAAGTGTTAGTCCGAGACGCAGCT
CTCGCAGGGAAAGGAGTAAGTCTCGTCGTAGGAGCAGTCGTCGCAGGTCTCTGGATCGTC
GCGAGAGGGAGAGGGAACGTGAGAGGGAAAGAGAAAGAGAACGAGAAAGGGAACGCCGGC
GACGAGAACGAGAGAGACGGGAGAGGTCGAGAGAACGTCGCCGATCGCTTGAAAGACGCA
GACGTACGCGTTCACGCTCTCGACGACGTTCAAGGGACAGATCTCGCGATCGTCGTCGGT
CTCGTTCACGTCGCAGGTCGCGGTCGCGTCGTCGCTCCGGTCGCAGGTCGCGTGACCGAC
GCTCGCGGGACAGACGCTCTAGGGATCGCCGGTCCAGAGAGAAATCCAGAGAAAGGAGAT
CACGCGATCGCTCCAGGAGATCGAGAGATAGGAAGTCTCGCGAAAGGAGATCCAGCGACA
TAATTAAGGAACGCTTGGAAAAATCTGTCTCTATACCCAGGAAGGAAAACCTTGATAAGG
TACCAAAGAAAGTGGAGCACGTGGTTCAGCGTGAACAGTCTAAGGAGCGTATCATATCTA
GTACAAGTCGGGAATCATCAGTAGCCGTCGAAAAACCTCCTCCAGAACCTGTAAACGATG
GGAAACCGCAATCAGACCACTCTGATGACGAGGAAAAGGAAGATATTGTCAACATTCCGA
ATTTGCGCGAATATTCCAAGAGCCTTTCACGCACTCCATCGCCCTTCCTTCGAAAACATG
AGGTTGACAAAAACAAGAAATCTGATGATGTCTCAGGTAAAGAGCCAAATGAAGACGAAA
TTAAAACGAAAGAATCCAAGCGAGGGAAACGCAAACCTCATCAATCTGATTCTGAAAGTG
CCACCAGTGAAGAATTGTCGAAATCAAAAAGCAAAGCTAAAGTCAAACGTAAAGAGAAAG
GTTCATCTAAAAGAAATAAGAAACCAAAGAAGGAGAGCTCTTCTAGTGATAGCGATTCCG
AAGATTCTTCTTCTAGTGACTCTGAGGAAGATAGGAAGAAGAAAAGCAAGAAGAATGCCA
AAAAGAAGTTGGCTAAGAAATCTAGGAAGAAGAGAGCTCGCTCTTCAAGCTCAGACTCCA
GTTCCGAAGAGGAAGTAAAACAAAAGGGATCAAAGACTAAACAAAAGAATTTGATTGAGG
AATCGGACGTTGATAAAAAAGCTAAAAAGCGCACCAAGGACGTAAGCAGTGAAAGGTCAA
GGTCGGAGAAAATTGACAACAAACCCACCAAATCCAAGAAAAACGATTCTGAAGATTCTC
ACGATGATAGTTCTGATACTGACGCTAAATCTAAAAAGAAAATCACTAAACGTGACACGT
CTAGCTCTGAAAAAGATCCAAAACGTGGTAAAAAAGTTGAACCGAGCAAGGAGAAAATTT
TATCACCTGATGTTGGCAAACTAAAAAAAGTAGAGGACAAACCGACGAAACCTAAAGTAG
ATGATGCTAAACCTAAGCCAAGAGACGAAACCGAGAAAAGACCTAAGAAAAGAGAGAAGG
ACGATTCCTCATCTGAAAGCGACCAAGTGTCTAAGAAGAAAATAAGGAAGAAGGTAACAG
ACTCAGAGTCTGATTCAGACAGTGATGAGCCTAAGAAATCAAAGAAAAACAAAAAACATA
AGAAGCATTCTAAGAAACATAAGAAACACAAGAAGCATAAGAAATCCTCTAAGAAAAAGG
AAGACTCTTCTGACAGCGACGAACCAGAAGAAGAGGAAGAAGGAAAGGTTAACAATGAGG
ATTTGGAAAAAAAACTGCGCGAAAGAGCATTGAAGTCAATGAAAAAACAAACTAGTGTGT
CAGGGTCCGATTAGGATCCATATTTTTCTGCTATTTGATTAAAAACTTTGTCATTTTCAT
TAACTTACGACATGTTTTAAAGAATAATTTAATGAATTAGCTGAAGCGATTTTAAGTAAC
GTGTATTTCATATTGTTAGTAATAAACAAGATACAGTAAAAAAAA
(3225 bp)

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