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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26924_c0_seq10
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:0.69 TPM:0.58
ORF EntryO_TrvaMG14934_complete:A_TrvaMG_comp26924_c0_seq10
Sequence
(Nucleotide)
TCACCAATCAACTTGAGGAAAAGGTGAGTAACTATTTTACTTTTATTTATATGTTTTTTA
CATGTCTATAAAAATGTAATCATTGCAGTTTCTTTTTAAAATGATACAAGTACTGTTGTA
GTAGTTTATTATATTTCAATCATATATTTGTGTTATATGTGAGCTAAAAGAAACTGCAAT
TGAAATATAAATGTAATATGTAATTGATTGCGTATGGATATTTTTATGGTCCCCACCGGT
TAGCGCGCCGTCGAAGTCATCCCCGCAAGTTGGTGCCGACTCCCGGACGCTGCCAGCTAG
CTTCGCTCTTTGGAGGCCTTAGCATATCTGCGGTATTTACGGGGAAAATTAAATAATTAC
AAGATAACTCATAATTAAATGAAGAAGAGTTTTCTGAAAGGGAAATTTAACTCATATGCA
TAAAATAGTTTATCAGTTCCCCAAAACCATTAAGAGGTGATTTGACTCAGGGCAAGGAAG
TGTTGTCGTTAGGCTTTGCGTTCAGCATAATGTGGTTGTGTTCGCAACACCCTTACAGAT
GCAAGTTGTCGAAGAAGGCGGAGAGCGGTGCGCGGGTGTCGGCGCGCGGCCATGTGCGGC
CTCGGCTCCGCGTCCCGCCGTCGCCGCGCTCCTCCCGCCCTGTCCTGCGCTCCGTCGCCA
CTCGACACGATACGAAGACTTAACACACAAACATGAAACATCTCACACTATGTATATTCA
TGTTGCTTCCTTACCTGAGTCATTTCGGAACTGTTTCTTTAATTATTGTTTAAATACACA
TAACACTCTTAATGGTTTTCATTATAGTTTCCGACAAAGTTTGATTTTTCGTTTTTTTTT
ATTTAGAAGTGGAATGATTTTGATTTGATTAAAATGATAATAAAGCCGAGTAGGACATGG
TATAAAAGCTTTATCCCAGTAATCAAGGAGATCATTGTTTGTGTTATTATTAAGCATTCT
AGATTTTAATCGGATATTTTTTCTTTTCCTCATCCAATCCATAATGGATCCTAGTTCCCT
TGCCCAAAGAAAATGCAGATCAACTTGACTGGATTTTTGAACGGAAAGAACGCGCGTCTC
TTCATGGGCGAGCTGTGGGAGCTGTTGCTGAGTGCGCAGGCCAGCGAGAATGGGATACCT
GAGTCCTTCACGCAACAAAAGAAAGAAGAAATTAAGAAGAGAATGGAAGAGCAGCAGAAC
AAGGACAAGGACAAGGAGCGGCGCAGGTCTCGGTCTCGCTCGCGGTCGCGTCGCCGTTCC
CGCGACCGACGACGATCCAGGACGCGCTCCCGAGATCGATCCAGCGATAGGAAGCATCGC
AATGGCGGAAGTCCACGTCGGTCGAGGCGTCGCAGTAGCCCCATCAGAGATAAGAGTCCA
CCAAAAAGTGAACCAGAACCCAGAGCACCAAGTGTAGCAGAGAATGGTAAGTCACCAGAG
AAGAAGGATGATGATGTAACAGAGGAACCGATTCAGAATAACTCATTGACTGTTAATGAT
TCTGTTAACGATGACAAGAAGGAGCCAATAACCGTGAATATTGACGATGATAAACCAGAA
GATGGAGGACAAAAATCTAGATCTGTTTCACCAGCTAAGTCGGTTGACGAGAAGGATAAA
TCAACTGAGGAAAAACCTGCGGAAAAATCCCGCCGATCGTCGAGCGAACGGCGATCGTCT
TCTGCTTCATCTCGTGGTAGCATAAAGAAGAGATCTTCACACAAGAAACGGCAGTACCGT
TCTAATCGCGACTCGTCAACAAGTGTTAGTCCGAGACGCAGCTCTCGCAGGGAAAGGAGT
AAGTCTCGTCGTAGGAGCAGTCGTCGCAGGTCTCTGGATCGTCGCGAGAGGGAGAGGGAA
CGTGAGAGGGAAAGAGAAAGAGAACGAGAAAGGGAACGCCGGCGACGAGAACGAGAGAGA
CGGGAGAGGTCGAGAGAACGTCGCCGATCGCTTGAAAGACGCAGACGTACGCGTTCACGC
TCTCGACGACGTTCAAGGGACAGATCTCGCGATCGTCGTCGGTCTCGTTCACGTCGCAGG
TCGCGGTCGCGTCGTCGCTCCGGTCGCAGGTCGCGTGACCGACGCTCGCGGGACAGACGC
TCTAGGGATCGCCGGTCCAGAGAGAAATCCAGAGAAAGGAGATCACGCGATCGCTCCAGG
AGATCGAGAGATAGGAAGTCTCGCGAAAGGAGATCCAGCGACATAATTAAGGAACGCTTG
GAAAAATCTGTCTCTATACCCAGGAAGGAAAACCTTGATAAGGTACCAAAGAAAGTGGAG
CACGTGGTTCAGCGTGAACAGTCTAAGGAGCGTATCATATCTAGTACAAGTCGGGAATCA
TCAGTAGCCGTCGAAAAACCTCCTCCAGAACCTGTAAACGATGGGAAACCGCAATCAGAC
CACTCTGATGACGAGGAAAAGGAAGATATTGTCAACATTCCGAATTTGCGCGAATATTCC
AAGAGCCTTTCACGCACTCCATCGCCCTTCCTTCGAAAACATGAGGTTGACAAAAACAAG
AAATCTGATGATGTCTCAGGTAAAGAGCCAAATGAAGACGAAATTAAAACGAAAGAATCC
AAGCGAGGGAAACGCAAACCTCATCAATCTGATTCTGAAAGTGCCACCAGTGAAGAATTG
TCGAAATCAAAAAGCAAAGCTAAAGTCAAACGTAAAGAGAAAGGTTCATCTAAAAGAAAT
AAGAAACCAAAGAAGGAGAGCTCTTCTAGTGATAGCGATTCCGAAGATTCTTCTTCTAGT
GACTCTGAGGAAGATAGGAAGAAGAAAAGCAAGAAGAATGCCAAAAAGAAGTTGGCTAAG
AAATCTAGGAAGAAGAGAGCTCGCTCTTCAAGCTCAGACTCCAGTTCCGAAGAGGAAGTA
AAACAAAAGGGATCAAAGACTAAACAAAAGAATTTGATTGAGGAATCGGACGTTGATAAA
AAAGCTAAAAAGCGCACCAAGGACGTAAGCAGTGAAAGGTCAAGGTCGGAGAAAATTGAC
AACAAACCCACCAAATCCAAGAAAAACGATTCTGAAGATTCTCACGATGATAGTTCTGAT
ACTGACGCTAAATCTAAAAAGAAAATCACTAAACGTGACACGTCTAGCTCTGAAAAAGAT
CCAAAACGTGGTAAAAAAGTTGAACCGAGCAAGGAGAAAATTTTATCACCTGATGTTGGC
AAACTAAAAAAAGTAGAGGACAAACCGACGAAACCTAAAGTAGATGATGCTAAACCTAAG
CCAAGAGACGAAACCGAGAAAAGACCTAAGAAAAGAGAGAAGGACGATTCCTCATCTGAA
AGCGACCAAGTGTCTAAGAAGAAAATAAGGAAGAAGGTAACAGACTCAGAGTCTGATTCA
GACAGTGATGAGCCTAAGAAATCAAAGAAAAACAAAAAACATAAGAAGCATTCTAAGAAA
CATAAGAAACACAAGAAGCATAAGAAATCCTCTAAGAAAAAGGAAGACTCTTCTGACAGC
GACGAACCAGAAGAAGAGGAAGAAGGAAAGGTTAACAATGAGGATTTGGAAAAAAAACTG
CGCGAAAGAGCATTGAAGTCAATGAAAAAACAAACTAGTGTGTCAGGGTCCGATTAGGAT
CCATATTTTTCTGCTATTTGATTAAAAACTTTGTCATTTTCATTAACTTACGACATGTTT
TAAAGAATAATTTAATGAATTAGCTGAAGCGATTTTAAGTAACGTGTATTTCATATTGTT
AGTAATAAACAAGATACAGTAAAAAAAA
(3748 bp)

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