SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26901_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_activating_signal_cointegrator_1_[Papilio_xuthus]
Ontology
GO:0002020 F protease binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0016922 F nuclear receptor binding
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0035035 F histone acetyltransferase binding
GO:0044389 F ubiquitin-like protein ligase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1901998 P toxin transport
Transcript
Level		FPKM:2.33 TPM:1.97
ORF EntryO_TrvaMG14785_complete:A_TrvaMG_comp26901_c0_seq2
Sequence
(Nucleotide)
ATTATTTACAACTTTTGTAATTAAATTATTTAAAAATGGAGCAATGGATACGTGAAAATC
TATCAAACATTTTGGATTTCGAAGTTCCTGATGATTTGATTCAGTACGTTATGGCTATTG
ATAATGAATCTGATTTAAGTGAATACATGAAAACGTTACTCGACTTCAGTAATCCAAAAC
ACAAAAACTTTTTTGTAGAAGTAGCAAAGCAGAAGTTTCCCCATAAAGGAAGCTCATCTT
CAAAGGGTAAAAAGAAGATATCCAAAGGTAAAGTACAACAGGAAGTGTTTGCCACAGAAT
CTTCTCCTCCACCAAATGAGACAGAAAGCAAATCTAAGAAGAAAACAAAATATGTCAACC
TATACTCACAAGAAGGAAAAAATGCACAAGTTGTATTTCTAAAAGGAAGACATCATTGTG
AATGCCAAGCTTCTAAACACGAGTTAGTGAATAACTGCTTGCAATGTGGTCGAGTAGTTT
GCAAGCAAGAGGGTTCTGGGCCTTGCCTGTTCTGCGGTAACTTGGTTTGTACTCCAGAAG
AACAAAGAGAGTTGAATGCTAAGACCAAAGCAAGTGCTAAACTGATGGAGACCTTAATGG
AAAGAAGTCGTCCCAAAGGTTGGGAGGAAGCCCTTTCTCATAGAAATAGACTTCTAGAAT
ATGACAGAACAAGTGAGCGTCGTACTCATGTGACAGACGATGACAGCGATTACTTCAACG
CTAATAGTGTGTGGCTCAACGCGGAGGAGAAATCTAAACTGGAGAAATATCAACAATCAT
TGCACGACAAGAAACACGCGTCTAGGTTGAGCAAGAAAATGACGTTCGATTTTGCTGGTC
GCCAAATAATAGAAGACAAGACAATAGATCACGAGGTAGACGAGGATAGAATCCGTGATA
TAACTCGCGCCGAGCCCACACCCGCCGCCATGTTGCAGAGCGACGCCTTCGTGGCGGGCA
GCGCCGACCGGGACGTCGCGCCCGGGGTCAACGCGCATCTACTGCAGTTCGACGGTTCAG
TAGAAGAGGGCTACTCGTCCGTGGCTAAGTTCACGACGCTGTCGGCCACGTCGCGCATAC
AGGACGCCGAGCTGCAGGAGATGAGCGACACGGGGCGCTGCCTCTCCATGCACCAGCCCT
GGGCGTCGCTGCTCGTCGAAGGAATCAAACTTCACGAAGGTCGCACGTGGTACTCAAACC
ACCGCGGCCGGCTGTGGATAGCGGCTACCGTGAAGCCTCCCGACCAGGACGTTATCAGAG
CTCTCGAGAACCAGTACAGGGTTCTGTATCCAGAAAAGCAACTAAATTTCCCATCGTTTT
ACCCGACGGGATGTCTGCTTGGTTGTGTCAATGTAGACGACTGTTTGCCGCAAGAAGAAT
ATCAAAAGAAGTTCCCGGAAGGTGAGAGTGACAGTCCGTACGTGTTCATTTGTTCGAATC
CCGTGAGCTTGAGGCTACGGTTTCCTATCAAAGGACAACATAAGATATATCAACTTGATA
AAACAATTCATCAAGCAGCAATGAAGTGTATCCAAAAAATGTCTAAAATTCACGCAAACG
CTGCTTAGGTAAGGTAGGTATTACAGTGAAATTGTAATTGTTTTACATTATAATGTATAA
GTTGATTGATGTCATAATTATCACTGTAAAATCATTGTAAAATAAAATATTTATTTTTTA
TTGAAAAATAAACATTAAATGTCAA
(1705 bp)

- SilkBase 1999-2023 -