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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26878_c2_seq7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_syntaxin-binding_protein_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
Transcript
Level		FPKM:2.90 TPM:2.44
ORF EntryO_TrvaMG14655_3prime_partial:A_TrvaMG_comp26878_c2_seq7
Sequence
(Nucleotide)
GGTACCACTTCTTGTCCTTGTACTTGAGCATGAGCTGGTGCGCGGAGGAGGAGAACTCGG
CGGCCTGGTTGTGCATGCGCTCGGTGCGGTCCTCCAGCTGCGACAGCTTGTCCCCGCGCT
CCACCACCATCTGGTGAGCGCGCGCCACCTCGGACGCGGCGGTGGAGGCGCGCGCCCCGA
GCTGCTCCACGGCGGCGTTGCCCCCCGGGATGTGCTTGGCGACGGTGCGGCTGCCCTTGC
CGCTGCTCTCGCCGAATAGTTCCTCCCTGTCGAGAGGTCGTGCCCCTCCTCCGAACAGGC
CCCTGAAGAAGCTCTCCTTGGGAGGCTCCGGCATGTCACGTGCCAAGAACACCTCACCCA
ACATCTCGTTCAATTGATTACAGAATTCAGCGTCGATCGTGAATTTCTGTATTTCGGAAG
GCGACGCGAGGTATAGACCGTGCCCGCGATTACTGAAGCAAAATGTTTTCGCTATCCTGA
GCTCCGAGAGCGGCAGGAAGTCGACGTCGATGAGCGGCCTCAGCGAGGGCAGGCTGTAGG
CCACCAGGTGACCCGTCGACAGGTAGTTCACCAGGCACACGCTATCTTTCAAGCTGACGA
TTTCAGCTTTAACAACAAAGTCAGTTTCGACGATCTGTTGTCTATAGACACAGTTCTGAC
TAGGCAGCGCCACCACCCGCGCCTGCTTCTCGCTGGCCACCACCACGAACTGTCTGTCTC
CACACTCGGCGCCGGCACCAGCCCCGGGCGTGGGGCTCATGCGGCTCCCACACCCGCTAC
TTGATGAGCTCTGTTTCGTGGGTGTTCGCTCTCGACGTTCTCGAACATCTTTACTATCAT
CTTTCCAACTCTCGTATGAATAAGGAATTAAAGCACCATTGCAGTCGAGAAACGACATCG
TTAATATTGAACCTCTTAACCTAAATATAGGACCACCGCTCGTAGAGACGACCACTGGTT
GTGTGTGCCTGAGGTCCGTCTCCGGGAGGCTGATCATCATCGTGAGCACCGAGCCCAACG
TTGTGCCGATCCATAGCGTGGGCAGTAACGTCGTGGGATCAGACTTCTTAGTGTAGCTAT
CGGCGAAGGCGAGGCACTGGATGCCCTCCTGCGATATGTTCTCGAGGCTGGACATGCTGC
TGGACCGAGACCGGGAGAACGAACTATCCAGTTTGTTGAAGCGGCGCATGAGGTTGCCGG
CGAAGGAGGCCTGCTGCTGCGAGGACTGCTTGCGGCGCGGCTCGCGGCCCGCCTCCTGCT
TACTGTACTTTATGTTCGGCACCGACAACAGCCTCTGATCTCTCTGATCTTTCCTCTCGA
TCTCTTCCTTTTTAATCTTCCCTTTCTGTCGAGGAGGCCTCGCGGGTCTGCCGTCTTCTT
CGAACAGAGGCAGGTTGTCGGGTCGAGTCGCCTTCTCCTCTTCAGCAGTGGAGGGAGAGG
CGTCGGTGGAGACGGCGTTCTCATTAGCCTCCTTGTCCTTCCATCGTTCCTGCAACTCCT
TGTGCATCCTGTCGTACACGTCACCAGATCTCTTCTCCTGCAGCTCCTTGTGCATTCTCT
CGAACACATCGGAGCAGACTCGCAGCGGTGACGGGAGGTCACTCTTGTTTTTGTCACTTT
CTTCTTCGTTTTCTACAATTTTATCATCATCTCTTGTTGGCGACTCTGCGCTAGGTTCAG
TCGGAGCATCAGTCTTATCCGTCGCTTCACAATAAAACTGTGAGGTGCTTTTTTCAGTGA
CGACCTCTTCCAAGTTGTTTTCAGTGGGAACGGCGAAGGCAGCCTTGAACTTGAGGTCGA
CCTTAGAGAGCTGTCGTTTGAGGTTGAAGTTCTTCCACGAGGTGGACTTCCGTCGCGGGT
CGAGCTTGGGTTTCTCTTCGTGTTGCGGCGGCGGTGGGGGCTGCGGCTGCGGCGCCGGGA
CGGGCTCGTCGCTCCCCTCGGGGCTGAGTGCCGGCGAGGGCCGCGGAGTCTCCTCCCCCT
GATCGAGGCTGGGCGAGCGTTGTCTCTCGTGTCGCTCGTGCTGGCGGGGCGCGTGGTAGA
GCGCGGCGGGCGACAGCGCGGTCACCACGCACCGTCGTGACATGTCCACCACCACCACGC
CACGGTCACCGCCCCACGCCATGAGTCCATACGAGGAGTTGAGTGTGAGCGCGGTGATGG
CGTGCGGAGGTCCTTGCTGCAGCGCCACCAGTGCGGGCTGGAACCCCGCCGTGCGCCGCG
CTCCCCCCGTCCCCACCGCACCCCGCACCCGCAGGGAACCCCACCCTCCCCATACACCAG
ACCTTCTGTTTTCCCCCTCCACGGAGTCCCCGCCGCGGCTAAACGACATCGACCTCCCCC
CCTCCGCCTCGGGAGACGTCTCCTCTTCTAACGTGTCTGTGATCATCGGAATGTCTATTA
CGTGTGTCTCTCCGTGCGTCTCCGTCTTGCGGAACTTGAAGAGCAGCACGTGTCCGTGCG
AGAGTGCGACGGCGAGCCTGCGCGACTCGGCACACAGCGCCACCTGCTGCGCGGCGAGGG
GGGACTCCTCGCCACACGCGTTGCTTACGGCGCCACGCTCGAACACTTTAGAACATTTAA
GTTTATATAAAATCTGTAACGTTCCCGCACTCGCGTCCCAAAACTTCACACTACCGTCTG
CGTGCCCTGTAAGTATAATCTCGCTGTAGGAGCAGGAGGCGGGCGCCCACTCTCCGCCGT
TAATGGGCCACAGCTTCTCGCTGAAGCCGGCTGTCTTCTTGTTGCCCTGACGACCCACCG
AGTAGAACGCAGGGATCAAGTCTGAAGGGCAGTCCGCGAAATACGAGCAGCAAGTGACGG
GAGACTCGTGTATGTCCATGGGGTAGGGATTCTCGAAGCAAGGGTAGCCGGGAGACAGCA
GGTCTATCACCACCAGGTCGTTTTGGAGGAGTACTACTATCGCGTATGGCTCCTGGTAAT
CAGCAGTGTGTGGTGTTTCACACAGCGTGACAAAGTCGACAACGCTGTGTTCCATCTCGA
GAACGGTGGTGCTCTTCCCGTTAAGAACCGTGATGCTGTGTGTCTTCCCCGCCTTGTCCG
TTGGCAGACCGCCGCTGAAGATTACTAGGCTCTCGCCAGTTTTCGAAGTTTTCCATTCAA
GTCTGTGTATCGGTTTACATGATTCCAATTTGCCGTCTTTTGTTGCTTTTGCATGTGGAT
AAGAGACACTGGAAGGTCTGGGTCCCCTCGTGGTCCAGGTGGCGAGCGCTCCGTCCACGT
GCGCCGTCATCAGCTTCCCGTCGTGTTGCCAGGCCGCCGCCCTCACCCCGTCGGCCGGTC
CACCTGTCCCGAGCGACCCTCGCCATTCCGCCGCGCGGGAGCGGAGGTCCCATACCACTA
GGAGACCGGACTCGAAGGCTATTAGCAGTTTACTAGCATCGAGTGGGTTATCACTAATGT
CGACCACAGCTCCGGGGTGATTTGATCTCGTTACTTCAATAGCCTTGTTCCAATTGATGA
CGTATCCGGAGAGAGCGAAGGTTTCTATGTTGACGACGTGCACGTTGCCTCGCTCTGTGC
CCACGTGGATCCACTTGGACTGAAGAGGCAGGTGGAGACATGTGATCCTTTCTCTCTGAA
ACTTCAGTGACTGCAGCCGTTGTGGTGACTTCTGCCTGAAGGTCCAGAGATGGAGCTGGT
CATCAGCGGTGGCCGTCACCAGCGCCCCTTCGTTGATGAGGAACTTGGCGTGGAGTACTG
CTTCTCCGACGTCATGGCGAACGTGGGCATCTACTCCGGGACCTCCTAATATTCTAAGGT
TTCCTGTCTTGTCTCCGATGGCGAGTAGCTTCTGTATGGGGTCCCACGCGAGGGCTGTGG
GCGAGAACGGGAATCCGTGCCGGAATGTCTTTTTAACTTGGAAGTGCTCGGGGCGCAGCG
TCTCCTGTATCTCCTGCTCGGTGCCGCGCGGCGCCGCCTGCATGGAGCTGCGGAACCCGT
CCAGCACCCCCTTGAACGTGAACTTCTTCATCGCGAAGTTTCGAGTCGCGGATCCTTTGT
CCGAGAGCCGCTCGCGCCGGCCGCGGCTACATCACAGCCGTCCGCCGCGGACAGCGAGCC
GGTTTTGGCGGAAGGAAGGACCGTCGTGTGATGGCACGCGCCGTCTCTACTGCGCAGGCC
GCCCGGGCCGCCGCCGACGCCGCCACGCGCCCGTCACGCCGACGATCGACGAAAACTAGG
CGAGGCACCGCCTCCGGAATGTACGGCAATGCGGCTCCAACGAGGATCGATACCGGAGCC
GACGATGCACACGCGCACTCGCGAGCCGCGATACGCTGTCG
(4301 bp)

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