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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26878_c2_seq10
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_syntaxin-binding_protein_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
Transcript
Level		FPKM:1.33 TPM:1.12
ORF EntryO_TrvaMG14663_complete:A_TrvaMG_comp26878_c2_seq10
Sequence
(Nucleotide)
GATAAATCATCTAACAAAAAGCTTGACTAACATTTATTATGAGCTACGAAATGAAACGAA
ATATTCCGAAAATAAAGTTTATAAGCCGTCATGCTGAGAACAATAGTAAGAGCAGAACAG
CAAGAGAAGACAGTATTTTTGTATGTGACATGTGACAAGGTGTGGTGGTGGGTGTGGGGG
TCGTGTGTGTTCGTGTGGGTACGACGACACGTGTGGACAGAGGACTAGAAGCGGGGTTGC
AAGCAGGGGGCACACGGACCAGACCGAACCACTTCCCGCGCACTGCACAATACAGAACGC
ACTTTATCATTTAAAACTTGTTCAGAAATACGAGTATCACTAATCAACATTTATACGTTA
AAGCAATGAAATCAAACTAATACTCTAATTTAAATTAACGAATCAAAAACATCAAATAAG
TATGTTACGCTGTGTATTCAATTTGAGAGCGCAGGTGATGGTTTTGCCCGCGTCCATTTT
AACATTCGGGTTTGAACAGATAGAGGGGTCTAGTCAAAGCATTCGATTCAGACGATGGAT
GGGCGTGGGAGCAACAGAGGAGCGAGCGAGTCCGGCGACTCCGGCGAGCATGGCAGCACC
TAGTCTCGCACACTTACTGGTCGGTGTCCTCGTTTACAATGAGCTGTTGGCCCCATATAC
TCAGCATTGGGTCTACGATACCCCTCTGTTTGGACTGTGTCTGGAAGCTGAGCTCCGAGA
GCGGCAGGAAGTCGACGTCGATGAGCGGCCTCAGCGAGGGCAGGCTGTAGGCCACCAGGT
GACCCGTCGACAGGTAGTTCACCAGGCACACGCTATCTTTCAAGCTGACGATTTCAGCTT
TAACAACAAAGTCAGTTTCGACGATCTGTTGTCTATAGACACAGTTCTGACTAGGCAGCG
CCACCACCCGCGCCTGCTTCTCGCTGGCCACCACCACGAACTGTCTGTCTCCACACTCGG
CGCCGGCACCAGCCCCGGGCGTGGGGCTCATGCGGCTCCCACACCCGCTACTTGATGAGC
TCTGTTTCGTGGGTGTTCGCTCTCGACGTTCTCGAACATCTTTACTATCATCTTTCCAAC
TCTCGTATGAATAAGGAATTAAAGCACCATTGCAGTCGAGAAACGACATCGTTAATATTG
AACCTCTTAACCTAAATATAGGACCACCGCTCGTAGAGACGACCACTGGTTGTGTGTGCC
TGAGGTCCGTCTCCGGGAGGCTGATCATCATCGTGAGCACCGAGCCCAACGTTGTGCCGA
TCCATAGCGTGGGCAGTAACGTCGTGGGATCAGACTTCTTAGTGTAGCTATCGGCGAAGG
CGAGGCACTGGATGCCCTCCTGCGATATGTTCTCGAGGCTGGACATGCTGCTGGACCGAG
ACCGGGAGAACGAACTATCCAGTTTGTTGAAGCGGCGCATGAGGTTGCCGGCGAAGGAGG
CCTGCTGCTGCGAGGACTGCTTGCGGCGCGGCTCGCGGCCCGCCTCCTGCTTACTGTACT
TTATGTTCGGCACCGACAACAGCCTCTGATCTCTCTGATCTTTCCTCTCGATCTCTTCCT
TTTTAATCTTCCCTTTCTGTCGAGGAGGCCTCGCGGGTCTGCCGTCTTCTTCGAACAGAG
GCAGGTTGTCGGGTCGAGTCGCCTTCTCCTCTTCAGCAGTGGAGGGAGAGGCGTCGGTGG
AGACGGCGTTCTCATTAGCCTCCTTGTCCTTCCATCGTTCCTGCAACTCCTTGTGCATCC
TGTCGTACACGTCACCAGATCTCTTCTCCTGCAGCTCCTTGTGCATTCTCTCGAACACAT
CGGAGCAGACTCGCAGCGGTGACGGGAGGTCACTCTTGTTTTTGTCACTTTCTTCTTCGT
TTTCTACAATTTTATCATCATCTCTTGTTGGCGACTCTGCGCTAGGTTCAGTCGGAGCAT
CAGTCTTATCCGTCGCTTCACAATAAAACTGTGAGGTGCTTTTTTCAGTGACGACCTCTT
CCAAGTTGTTTTCAGTGGGAACGGCGAAGGCAGCCTTGAACTTGAGGTCGACCTTAGAGA
GCTGTCGTTTGAGGTTGAAGTTCTTCCACGAGGTGGACTTCCGTCGCGGGTCGAGCTTGG
GTTTCTCTTCGTGTTGCGGCGGCGGTGGGGGCTGCGGCTGCGGCGCCGGGACGGGCTCGT
CGCTCCCCTCGGGGCTGAGTGCCGGCGAGGGCCGCGGAGTCTCCTCCCCCTGATCGAGGC
TGGGCGAGCGTTGTCTCTCGTGTCGCTCGTGCTGGCGGGGCGCGTGGTAGAGCGCGGCGG
GCGACAGCGCGGTCACCACGCACCGTCGTGACATGTCCACCACCACCACGCCACGGTCAC
CGCCCCACGCCATGAGTCCATACGAGGAGTTGAGTGTGAGCGCGGTGATGGCGTGCGGAG
GTCCTTGCTGCAGCGCCACCAGTGCGGGCTGGAACCCCGCCGTGCGCCGCGCTCCCCCCG
TCCCCACCGCACCCCGCACCCGCAGGGAACCCCACCCTCCCCATACACCAGACCTTCTGT
TTTCCCCCTCCACGGAGTCCCCGCCGCGGCTAAACGACATCGACCTCCCCCCCTCCGCCT
CGGGAGACGTCTCCTCTTCTAACGTGTCTGTGATCATCGGAATGTCTATTACGTGTGTCT
CTCCGTGCGTCTCCGTCTTGCGGAACTTGAAGAGCAGCACGTGTCCGTGCGAGAGTGCGA
CGGCGAGCCTGCGCGACTCGGCACACAGCGCCACCTGCTGCGCGGCGAGGGGGGACTCCT
CGCCACACGCGTTGCTTACGGCGCCACGCTCGAACACTTTAGAACATTTAAGTTTATATA
AAATCTGTAACGTTCCCGCACTCGCGTCCCAAAACTTCACACTACCGTCTGCGTGCCCTG
TAAGTATAATCTCGCTGTAGGAGCAGGAGGCGGGCGCCCACTCTCCGCCGTTAATGGGCC
ACAGCTTCTCGCTGAAGCCGGCTGTCTTCTTGTTGCCCTGACGACCCACCGAGTAGAACG
CAGGGATCAAGTCTGAAGGGCAGTCCGCGAAATACGAGCAGCAAGTGACGGGAGACTCGT
GTATGTCCATGGGGTAGGGATTCTCGAAGCAAGGGTAGCCGGGAGACAGCAGGTCTATCA
CCACCAGGTCGTTTTGGAGGAGTACTACTATCGCGTATGGCTCCTGGTAATCAGCAGTGT
GTGGTGTTTCACACAGCGTGACAAAGTCGACAACGCTGTGTTCCATCTCGAGAACGGTGG
TGCTCTTCCCGTTAAGAACCGTGATGCTGTGTGTCTTCCCCGCCTTGTCCGTTGGCAGAC
CGCCGCTGAAGATTACTAGGCTCTCGCCAGTTTTCGAAGTTTTCCATTCAAGTCTGTGTA
TCGGTTTACATGATTCCAATTTGCCGTCTTTTGTTGCTTTTGCATGTGGATAAGAGACAC
TGGAAGGTCTGGGTCCCCTCGTGGTCCAGGTGGCGAGCGCTCCGTCCACGTGCGCCGTCA
TCAGCTTCCCGTCGTGTTGCCAGGCCGCCGCCCTCACCCCGTCGGCCGGTCCACCTGTCC
CGAGCGACCCTCGCCATTCCGCCGCGCGGGAGCGGAGGTCCCATACCACTAGGAGACCGG
ACTCGAAGGCTATTAGCAGTTTACTAGCATCGAGTGGGTTATCACTAATGTCGACCACAG
CTCCGGGGTGATTTGATCTCGTTACTTCAATAGCCTTGTTCCAATTGATGACGTATCCGG
AGAGAGCGAAGGTTTCTATGTTGACGACGTGCACGTTGCCTCGCTCTGTGCCCACGTGGA
TCCACTTGGACTGAAGAGGCAGGTGGAGACATGTGATCCTTTCTCTCTGAAACTTCAGTG
ACTGCAGCCGTTGTGGTGACTTCTGCCTGAAGGTCCAGAGATGGAGCTGGTCATCAGCGG
TGGCCGTCACCAGCGCCCCTTCGTTGATGAGGAACTTGGCGTGGAGTACTGCTTCTCCGA
CGTCATGGCGAACGTGGGCATCTACTCCGGGACCTCCTAATATTCTAAGGTTTCCTGTCT
TGTCTCCGATGGCGAGTAGCTTCTGTATGGGGTCCCACGCGAGGGCTGTGGGCGAGAACG
GGAATCCGTGCCGGAATGTCTTTTTAACTTGGAAGTGCTCGGGGCGCAGCGTCTCCTGTA
TCTCCTGCTCGGTGCCGCGCGGCGCCGCCTGCATGGAGCTGCGGAACCCGTCCAGCACCC
CCTTGAACGTGAACTTCTTCATCGCGAAGTTTCGAGTCGCGGATCCTTTGTCCGAGAGCC
GCTCGCGCCGGCCGCGGCTACATCACAGCCGTCCGCCGCGGACAGCGAGCCGGTTTTGGC
GGAAGGAAGGACCGTCGTGTGATGGCACGCGCCGTCTCTACTGCGCAGGCCGCCCGGGCC
GCCGCCGACGCCGCCACGCGCCCGTCACGCCGACGATCGACGAAAACTAGGCGAGGCACC
GCCTCCGGAATGTACGGCAATGCGGCTCCAACGAGGATCGATACCGGAGCCGACGATGCA
CACGCGCACTCGCGAGCCGCGATACGCTGTCG
(4532 bp)

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