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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26859_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_nuclear_export_factor_CRM1_[Danaus_plexippus]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:9.22 TPM:7.76
ORF EntryO_TrvaMG14506_complete:A_TrvaMG_comp26859_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTATATTTAATGTTTATTTCAAACACAAAATTGAAAGACGACAATTAATCGG
ACCCAAATTTCATAAAGAAATCATACATAATTACGGTTTTGTGTCACCACTATATTATTA
TAGATTTCCAAAATTACGAAATTAGTTTTGCCAACATTAAACGAAACAAAAACATTACTA
ACATAGATTCTTACTTTTCCTAGAATCTACACGTAATACTCAGATTCTGCAGTGTACATG
TTGAAATCTGACACTGGGTTAAATCACAGAGATTGCATTACATACTTATTTTTGAAGATT
ACTTAAAAACAAACAGATATTCTATAATTTCTAACAATGTAAATTGATGCAGTTTACAAT
CTATAAATATTTAAGGCTCAGAAAATGTCTTACGCTTTTAAAATATGATACCTTAATCTT
GTTGCAGCTAATTCACTTGCATTCATCTCCTTGCATTGGAACCTGACAACCTCCTGTACA
AACTATCATAACAGATATTTTAGGAGCACAAGACACAGACAATAGTCATGTCAATGGCAA
CAGGTCATACTACAACTACTAAAACTAATGTTAATACAGTCAGATATATTAATACCGAAA
ACCGCCAGAATATTGTATATTCATGATCCATCTCTCTCACCTTACATGATATTCCTTAAG
GAAACAAAATTATCATAGAAAAATGCATAGATTTGTAGTCAGATATATAAACTGACTCTT
ATTATTATAAAGCAGTAAAACAAATGAGGCTATAAATGGCAGTTAAATTCAATGTTAACA
ATTTTGAGAAAGTTTAGAAAAAAGTTTTAAGTACTTATTTCCTAGTAAGTCAGTAAAATA
TTTAAAAAAAATCCAGGGTAGCCCAATCGAACTTTATAAAATATGCAGCAGATACAATCA
CCATTGAATATAGCTTAAGACACTATTTTACTACACTATTTCACCTTAAACTGAATTTTA
TTTAACCTATGTATGCTGTTGCCATTTTCTGAGTTTTAAATTTATACCAAATTAATCTTG
CATCTCTTCTGGCAATTCATGTGGGTTCAGAATGCCTGGTACCGATAATTGTACTCTTCT
TTTGTCTTCTTGTGCTTGACTTAAAACAAATAGACGCTCTTCCAAGTACAAATCACTGTC
ATCCTCACCTGTGTATTCTCTAATTTGAACTAAAAAGTCTCTTAGATGATCCTTGAAAGC
AGGTATGTCTTGGTTTAGATTAAAAAGACCTTGCACAGTAATTTTGATTTGGTTATCAGT
AAGATGAGGGAAAGCTGTTTTCAAAAGATTTGCAACATATTCCTGAATATAAAGAACATT
GTCTGGAGTGGGCCCAAGTGGAACAGTTACTCTGCCAGCCTCAACCAAAGAGAAAATGTG
TGCCAAGATTGTTGCATGCATGGTAAGTCCTGCACCATGTGATGTATCAGTCACCACACT
GAAGACATGTTCCAAGATGTCACATAGGTATGTTCTATAAAAGCTCTGTGCTGCCTGTGA
ATGTTCTTCAACATTCAGCAACAACCTGTACAGTATTTGTAAACCAGTGTCTGCAACATT
CCTCATTGTGTGTTTAAATGCCCAAATAATAGAATCCAAAACCAACTTGAATTGTGCTGG
TGGTATACTCAAGAATGCTTTGAAGCAATTTGTATTCACAGCTTGCAGCAATAGGAAAAA
TTCAGTTCTGTGTTCAGGATATACTTCAAAGTCTTTATTTATCATTTCAAGTGTACATTC
AAAAACTGCATCAAAAATTTTTGGAACTTCAGAAGTAATATGTCCTCCAAGCCTGTGAAC
TATAGCTGCCATGCAGGATAACACCTCTGGCTCACGAGCATCAGGGACAGCTGTTCTTTG
ATAATCCAAAAGCACAGCATCAAGAAGAGGGGGAATAAAGTTTTCCAAAACCATGCTGTT
GTCTGTGGAACGTGAAACCCAGCTTGCAATAAGGTTAAGAGTTTCCTTTTTAATTATTCT
CATATTCTTAATAAGAGGTTGTTTAGTAACTGCTACACCATTGAGAGCAATAGCATGACT
TATGTTCTCAGACATAACTTTGTAAACATTAAGCATATCAAGGTATATTCTACCTAACTG
AACTACATAAGGGTGTGCCAGTGCACGACATGCACGCACATTCGTTTTAAGTATGCTTAC
AAGCTGTTTAACAGCTTCTGGATCTTTTAGAATTTCAACATTATGAGAAGCTTGTGATAT
AATATCATCCCAAACTTGATTAGGCAGCAGCATATATTTTTCAATAAGTAATTCTTGAGC
CACTTGGTCCACTTGGGCACTGATCATGTATCCAACAGCTTCATAAAAGGTGTGCACTTG
TAATGTTTGTAAGTCACAAATTATAGTACTGATAGTGCTCAATATTTCCTCAATAAAAGG
ACAGGCTTCCCCAACTTGTGTTGTCACAAAATGTCTGCGACATTTAATAGCAATTTTTAT
AAAGGTGTCACAAGCCATATCTTGAACACCATCATGAGTTTCATGCATAAATTCAAATAA
TTTATTAACAACTGTTTTTAAAAATTTCCAATGGGCACGAAGAAATCGTGGATACTGTCC
AACAACATACATGATATTACTAGCAATTATAGCTTTGTTGTCTTTCCCTTTCTTTTGTTC
ACACAGTCCTAGAAGCTCTTTTATAACTATCACAAGAAATCTTTTTTCATCATCTTCCGA
CAACGCTCCAGATATAGATCCAATAGCCCAACAGAGTGTGTTCAAGTTTTTCCATGACCA
CTCACTACCATTTACTTGATTTTGCAACTTTTCTGTCATAATACGTTCAGTATCTAAGTA
GTCCAAATGTGTCAAGTAAACTAATGTCTCTCTCATGTTTTTGTATAAATTAATGGAATC
TGTATCCTTCATGAATTCCCGCACAACTTCACCATTTTCATTTTCCACAACTAATACCTC
TTCTGGTTTTGCCATTCTGGAGATCATTATGTAACGAACACTGCTTAAGACATCAGCATA
CAATGCTTTTCTACCCACACTTTTACCCAAATTGTACAAGCCTGACGAACATGGAGCTAT
TTTATACAAATCAGCAGCCAGAGCATTCCAATACTCTAGACAAATTTTGAAGATTTCTAC
ATCCTCTACTTCAGATATCAAGACAAGATATCTTAAACCATTCATCAAAGTGTTTGTGAG
TCCACTTTTTTCTATGAGTGCTCCATGTTCTTTCAGGTATGTGCACAAGAAAAGTGCTAG
ATTTTGTATAAACACCTGTTCTTGATCACGACCAGCTGAATATGCCTCCCGAATGTTTGT
AGTGAGTGGGAGCATGGCTTCGAGTTGTTCCATTGTTTGTACAAACAAATATATGAATTG
TTCTTCATAATTACTGACTGTCACACCAGCAATCTCAGTGAGACAGCTTAAAGTAACATT
TCTGAACATGGGAACATTCAAGAATTTAAAAATCAAGGTGCTTATCAGCTTCATCTCAAA
TATATAACCAAGCGGGATCCAGTTTAAAAATCTTAGAAGAGTATCCAGGGTCACTCCAAC
TAAAGGTGCGTTCTGTGAATTTTCCAAGACAAACTGGCATAGTTGGAATATTTGACTGAA
TTCCGAACACATTGTATCCTTCAAATGTTTGGCTTTTGTTTGGGTGAGCTGACCTGTACT
AAACATGAAAACTTCTTCGCTTAGTAATTTCAATATTTCCATATTGTTTTGGCAGAGGCT
TTCATTGGTTTTTGAAGCACCCACTATGTCACTTATAAAAGTTTCCCAGTTATGGGGCCA
TTCTCTTTTCAGGACTTGGATCAGAATCATGTTTAATTTTTTCAAATACACTTTGTTGCT
TTCCATCGTAGCTGGGTCTGATGAATTTTTTATAATAAGTCCAACAATATATTTTTTGAT
ACCCTCACATTGATTTCTGGGTAATATTTTCCATCTTGTTTGTATAACTTGTTCTAATAT
TTGTAAAGCATAATATTTAGTTTCTTGATTTTGAGAATATTCCAGTATAGTATCAACACG
AGTCCAAGCATCAGGATGCTCTTTCAAAGCAGTTAGTATATCCTGAGCTACGCGTTGTTG
ATCCCCCACAGTTGAATATAAACATCCAACAATGTTATCCAATAAATTTATATCCAGTTT
TTGGTTGAAATCCAGGAGTTTAGATGCCTGTTGTTCTAAGGTTGCCATTTTTTTCAAATC
TTACTTCAATTTCTTGTTCCCTTTTTTATAAACCAATTTTTCTAAAATTAATCCACATTC
ATTCCTCACCATGTATAACACCGAGAAAATTATTTGCGGCGCAATCAATCTAACGCACTA
CCATACATACTAATCCGTTGTTTTCATGAAGCTTGAAAAAGCTTAT
(4366 bp)

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