SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26837_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:4.38 TPM:3.69
ORF EntryO_TrvaMG14392_complete:A_TrvaMG_comp26837_c0_seq2
Sequence
(Nucleotide)
TGCCCACTGCTGGGCTCAGGTCTCTTCAGGACCACGAGACCACAATGTGGATTTGGGACT
TCACATATCTTCGAAGGACTTTTTTCTTTTAGTTTTACATTTGTTGTAGTTTGAATCCTA
TGCTGCAGTTATCATTATATTCGTTATGTATAAGTATTGTTGTAGTGTGTGTATGTGTGT
CACTGCTCGTAGTTCTTGGCTTTCCTCTCCATTTCGTCGTCTGAAGTGCGGTTCATTGAG
TGATCTTGGTGTTGCGGCATCTTGGGCACCAGCACCACGTTACCGTCGGCGGCCTGCTGC
AGCGAGTACTGACTCGAGGATAGAGGCCTGCCTTCCGGGTCGCGGAGGTTCTGGAACACG
TGTCTGTAGAGCGCCGCGAACCGTTCCTTGAGTCGCTGTCTGTCGGTGAGGAGCGCGTGG
TGGTCGCGCTGTGTCCGCAGCTTGCGGTCGCGCACGGTCCGCACCTCGTCCGCCAGCGAC
GTGATCTGGTCCAGCTTCCGTTTCCGGCAGTTTTGGGCTGCGACCTTGTTCTTCCCCCGC
CTCCGGATGTCCCTGATGAGTGAGAGCTGCGCCTCGCTGAGGTCGTGCTTGGAGAGCCGC
TCGTTGAACTCGTCCATCGGCAGGTTGATGATGTCGTGGACCTCCAGCGGTATACCGAGT
GCCTTGGCTCGTTTCTCGTCGCGGGAGAGATGCGTCCCGCTGCTGGACGAACCGCCGTCC
GACGCGCTGCCGTCCGTCACGCGACGAACTCGTTTGTCCCGGAGCGCGGGTGCGTGCGCG
GGCGCGGCGAGCGGCGCGCTGTACGTGTGGTTGTGTCGCACGCGATCCGGAACGCCGAAC
CCGACGCCGCTCTGTAGTAGGGTGTGGCTGGAGTGCGGCGCGTTCAGTTCGAGAGCGGGC
TGCAGCCCTGACACGTGGGGGCCGGCTAGTTGATGACGACCTCCGAAATCGTTATGCATG
TGTAAGTTCTCGTGATGGTAAGCCTGCTCGGGACACTCGTATTTGACGGGCGTGGGTCGC
GGGGTCTGCACGGGGTCCATGCTAGGGGGGGCTTGCTCCTGGAAACATCTTTTTCCAAAC
ATGTGATGTTTTTTCTGCGGCTGGTGCGAGGCGGAGCGCTCTCTACCGTACGAACTCTCG
TATGGACGAAACTTTGAACTGTGGAACTCCTGTGCGGAGTCGCTGCCGTCGCACCACTCT
CCGTCAGACAACGAGGGTACCCGCTCTGAGCCCATGGACGACACGGCGCTGTCCGATGCG
CTGTCACGTTCTGGCACCATCATGTGCGTATGGTTGTGATGCGGTCCATGATGAGTGCTC
GCTCCATCCAGCATCCTCATCGTATACATTCCATCGTAAAGTTTGTAATAGGATCTCAAA
TACTCCGGGTCGTACAGGACAGAGTTCCCAAAGTATGACGTCACCGGGTAATAGGGATGG
GCATAGCCGTGGTAGCTAGCAACCGTCAAATCCATTTTTAAATCTCTACTTATCTCTGCA
ATCCCCGATATTTTCCTATGTTTTTCTGTCCGATAATATTGTTGTATATCTTAAGTAACG
CGGCGTAAGTATATTTCTACTAATATTGATTATCCTGAATACTTTGTGTAATAATACTGA
TACTTAGTGCGTATGAACTCTTATCTTGAAACAGCTGGTTGATAATGTCGGGTTTTTTTC
GTAATCGTTTATCTGTTATTGTTTCCTCTTTTCGAGAAATATTGGTAATTTCGCAGTACA
GTTCATAAAAGAAAAAAAATGTAATCAAATTCAGTTTTTATTTTCCAAATTTGGCAGTGT
CTTCGTTGCATTAAAAAATCTAAAACTCTTTTTATGTTTTACTCCAGCCAGTATCATTCG
ACGTAGAAGCATTCAAATCCTCGTATTATTCCAATGTTGGCAGTAACGTGATTATTCCCC
TTGTCACGTTGTCAATATTGACTTGTTTTTCTCTGTAGTCATGCAATTTCTCCGTTCGGA
AATTTCTGTGACGTAAGCACAAACAGAGATATCCCAGTGCAAATAATTAAATTCCTTTCC
TTAATACATTAGTCAAACACACATCTCTGTACCCATTGTTCTGTTATCTCTGACTAAATA
TAGAAATATACAGATTTTCATTGGATTCAGCTCGAAGAATTGTCTATATTTAAACGACCA
TAGACAAAAATTGTATCGTTTCAAAACGGAGACGGGAACCTTGGTAAGGGAATCGCACGT
GGTACGTACTCTGCGGAGAGAACGACAGTATCTGCACAGGCATAAGCCTCCTTCCAAATG
CACCTTTCTGCTCTTGCTTACACGAATACGCAAATAGAATGGCATAGGTAGGCTTTTGTC
TTTACTAATCACAAAAAAAGAAAACACTGGTCGAAAATACAAAAAAAAATCCAATTTAAT
TTAAACTTAGAAGCCAATTAAACTAATTCCACAGCACACTTTAAAGTTCCCAATTCAAAG
TCAACACTAGTTCGATTTTGGAAATGTTTTTTATCTTTTTTAGTTCGTCTTTATCACTAT
AAGAACTCACTGTACAGAGGCAAAGTGGTACATTATAAAAAGTCTATAAACGTACGACTT
ACAGCCCATGATGGAATAGAGACAACGAAATAAAGCTAAATCATCACTTCGGGCACAACT
TTGAGAACACACAGAGAATATTTTTTTAAATAATATATTATTTTCGGAGATATCTACACT
AGGCCAACGCAAGACAGTAACTGCGTGAAGCGAGAAGGCTTCTACTTA
(2748 bp)

- SilkBase 1999-2023 -