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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26820_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:3.95 TPM:3.33
ORF EntryO_TrvaMG14327_3prime_partial:A_TrvaMG_comp26820_c1_seq4
Sequence
(Nucleotide)
CGCGCCACAGCTCGCTGCTTACCCACGATCGAACGACCGACGCCCGCGACCGGTGTCGTA
TTACCGCTCTAAATTTATCTCGCGAGCGCGATCGCCAATTTGGAAACGGTCGCGCGCCGT
GTTTTGAACTGGTGATTGACAGTGTCGAGTGAGGAGTGCTCCCCCGAGCGACGAATATTA
GCCTGCCGACATGGCACAGTTACTAACTGTGCGGCTCAATAAAGCTGACCAGCAGCCTTT
GGGCTTCCGGTTGCAAGGAGGCAAGGACTTTGGCACGCCACTGGTCGTACAAAAGGTGAA
TGGCGGCAGTGCAGCAGAGCGAGCTGGCTTGCAGGCCGGAGACGCTCTGATCCGCGTCAA
CAACACAGACGTGTACACGTTACGTCATCAGGACGCACAGGACACCATCCGAGCTGCTGG
TGGTAACCTCGAACTGACTATCCAACGTGGGGGAGGAACATGGCGGCCATCAGTAACGCC
CACAGGCAGCCTGCCCAGACCTGGCTCTCGTCCGCTGGGAGGCACCCCGACACCCGTAAC
CAACACTTCACTGAAGACAACACAACAACCTTCGCGGAACTTCGGCTCCGGACACAACAA
CGTCGCGAAACCTTTCGGTTACATGAACGGTAACGACAACGTCAAGAGCATCGTGAACAA
ACAATACAACACTCCAGTGAACATCTACAGCGACAAGACCATCGCGGAAACTCTCTCAGC
ACAAACTGAAGTACTGGCCGGTGGAGTACTAGGAGTTAATTTCAAGAAGAACGAGAAGAC
ATACGATGCTGAAAAGAGTGCAGTTTTCAAAGTACTCCAGGAAGAACAAAATGATCCTGA
GCCAGAAGTGTCGGCCCCGTCGGCCGGCTCAGTGCCCCCGGTGAGCGGGCTCCGACACGT
GCAGGCGCCCGTGACGCGGCCCGACGCACCCATCAACAACACCGGCGGCTTACCCCCCGG
GCAGAACATTTGCGAGGAGTGCGAACGATTAATTACGGGCGTGTTCGTGCGCATCAAGGA
CAAGAACCTCCACGTGGAGTGCTTCAAGTGCTCAACATGTGGATCGTCGCTGAAGAACCA
GGGCTACTACAACATAAACGGCAAACTGTACTGCGACATCCACGCCAAGCTGGTCGCGCG
TCAGAACCCGCCCGCACCTAACTTGGACCCCGTCACTGTGCCACCTGGTGGCCGAGTACC
GAACAACACATACTCCACGCCTCTGCCTCCACTTGCTACCAACAACTACACTAATGGATC
ATCTTCTCTATTCAGTCCATCAAGCAATCTGTCTGGTCCGAAGCCGTTCGGTTCTTCGGT
GGGCTCGGCGTACTCCCCGTCCTTGTCGCCGCGCTCGGCGCCGCTATCCCCCGCACGGCC
CGTCCCCGCGCCCGCCCCGCAGTCCCCGGCGAGACCCGTGGCCGCGCCCGTCTCTGCGCC
CGCACCGCCATTCGCACCCGCACCCTTCGCTCCCACTACTGACGTGGCGCCAACAAGTAG
TCCCCAAAAACCGGAATTCAAAAGTCAAGCTGAAGAACGACTTATTAGAAAAATGCATAA
AATGGCCTTAAATGGATATGAAATAGGAATTCAACGTAAAATAAAGCCCGCTGAACATAT
TCAATCTATGGCTGATAAAATCCAAGATACCGTTGTCACCAAACATCCTCTCAATACAGA
TCTTCTACCTGAAGATATTATTCGTGAGAACAATACTCCGAGAAAAACATCAAAAAATGA
CAATTTGTTCAAACATATCGAATTGGGAACCATGAATGATAAAAATAAAGACAATAATTT
CCTTAATCCCATAGTTTATAATGGTAGCACTCCAGTACCACCACCATTGCCTACTTCGCC
TATACCAACGTTTAATATTCACAGTACACCTCTTGGAGAATCAATAATTCACAATAACAT
AAAGCAATCGGACTTTCCCATTTATTCTAACGTCGACGATGATTTAGACTCCCAGTATGT
AATTTTGAAAGAACCTTTAAATGATACCGATCTCAAAATTACTGATGATCAGAAAGATAC
TATCAGTACTAAAAAACCCGTGAATCAATTTAAAAAGACAAATGGTTTACATACACCGTT
GATAAACGGAATTAATTCAGTAAAACCAGAGAAAGAACTTGATAACAGCTTAGAGAATCA
CATCTACTCAAACACTTTGAAAAAAAGACAACTGTTTGAAAACAAAGAAGATACTAATGG
ACATAAATTTACACCAAATGAAATAAAAAATGACAAAAAAATCAATGACATATTTTCAAA
AATTAATGCTGCACATTTCAAACAAGATATTTACGATGCACCTGCACCGGTGCAAGACAG
AAAAGTAACAATACCCCCAATTTCTATCAAAGACAATACAACAGCAACTTCAAATACCCC
TTCAACCAAAACCTATGAAAACGATATAGATACCATTCCGGAAACGACCAATGAAGATAA
ATCTGTGAACAATGATAAAGAAGAGGTTGTAAGGCGTAGGCAGAAAAAGAATATCAGGAG
TGATGACGGTAGAAGAGATTCTCATATTATAGCGAGGCCACTAAGTACAATGACTTCCGT
AGACGTGGAGGAAGGAATGTACCCGGTTTGTCACATTTGTGACAAAGCTATAACGAGGGG
ACCATTCATCACGGCTCTTGGACGCATATGGTGCCCTGAACACTTCATCTGCGTGAATGC
AACATGTAGACGCCCGCTGCAAGATATCGGTTTCGTCGAAGAGAACGGACAACTCTACTG
TGAATTCTGTTTCGAGCAATATATAGCACCAGCATGTGACAAGTGTCATGCCAAAATTAA
AGGCGATTGCTTAAATGCTATCGGCAAACATTTCCACCCGGAATGCTTTAACTGCGTCTA
TTGTGGAAAGTTGTTCGGAAATAATCCATTCTTCTTAGAAGACGGACTACCCTACTGCGA
AGCAGACTGGAATGAGCTCTTTACCACAAAATGTTTTGCTTGCGGATTCCCCGTGGAGGC
GGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCAC
GGTCTGTAAAAAGAACCTCGAAGGACAGAGCTTTTTCGCCAAGGGAGGGCGACCTTTTTG
TAAAACGCACGCCCGTTAAAAGTCCAATCAAAATAATTTACAACTCAGACACTGTTTATT
CGACGACTACTTTCCGTCCCGTTTCACCGTCGCCGATCACACCGCCTGCGATAAGTACAC
CGTCCCCACAGAGAACCAGGAAGTTGGAAACGCCCCTCCACTTCGATGGAGGACTGTTTT
CCGACATACGAAGTACAGATGGCAAATTACTTAGCAAAGTAACAGTCGACAGAGTGCAAC
GTTCCACGCACCATGACGTCACCGACTCACCAAGTACTGTTGAAATTAATGACAAGAACT
ACGTCGA
(3427 bp)

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