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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26820_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Papilio_xuthus]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.92 TPM:0.77
ORF EntryO_TrvaMG14319_3prime_partial:A_TrvaMG_comp26820_c1_seq1
Sequence
(Nucleotide)
GACCTACAACGCCAAGTTTGATTAATAAACCGGCACCAATTATTCCTCATTACCAAATGA
ATTTAGTTACAGTAGAGCATTTGGCACCAGAAAGCCATTTGTATGATCCTTCCAGTCCAG
AGGCAAGTCGTTCACCTACACCAAAACCCAGGTCTCGATCTCCAGCACCAGGCCCCCCTC
CGAATCCTTTAAAAGCTCATGCACCTCGTATTAGAGAATCACCTATGCAGCAATCTCCGC
ACTCGCACTCATTATTAACGCAAGCGACAGCAAATCTGAGGAAAGAACATGAATATCAAA
AACAACAACATAACGTTGAGTTTCAAGATAAAACATCGGAGAATAAATGGATCTCGGAAC
CATCTAACGTTATCAAAGAGCAGACTCATTCAAACAAAGGATACAAAAGTGAAAACTATG
CAAAAGGAAATATGTCAATTAAAGCAGATTCAATGATGGCACAAAATTTCGCACAAAGAC
AAATGGAGTCACAAAATGTTTCGGATTTCGGACATACTACGGTTCAAACAACTAGAAAAA
CTTTCGAGGAGTTTGAACATACGCAAAAAGCCAAGACAATTGAAATTCGTAAAGGTGGTT
CATCTTTTGGGGAGCAGCAGTATTTAGAGTCTAATACCCAATCCACACAAGTAAATGCTA
AACAAGTGTTTCCATCTCCTGTTATGACATTACCTACCCAAGAAGTGTTATCTGCCAACT
CATCTAATTATCTTAATAACGATAATTCTGCAACTGCTAGTAGAAACACAGGCATTTATA
AGCCAAAACCTTTGAATTCTGGTGCTAACCAAGGTCCAGTGTGTGATCCTACCCCGTCGA
CAGGTTCCAGTGTAGGGGCTCCCACTCGTGGTAAAACTTTCGGAGTTTCATCGGCACCAA
AACGAGGAAGGGGAATTTTGAATAAGCCTGCTCTGCCCGGCTCTCGTGTACCACTTTGCG
GATCTTGTAATGGAAATATTAGGTGATTTGATGTGTGGAGTTGATTGTTGTGTGATGCAT
GAATTTTATCGAAATAATAATAATACGATTACCACTTTGAATGTAGCCGTTGTTTTAATA
TTATGTAACCTTTGAAACTTGTTTTAGTGTGATTTGCGTTAGCTGTAGTGCACTAAATCT
ATTACTAAAACTGTTACGCTTACCTGTTTTTGATTTTTTTCTAACAGCTACTGACGTGGC
GCCAACAAGTAGTCCCCAAAAACCGGAATTCAAAAGTCAAGCTGAAGAACGACTTATTAG
AAAAATGCATAAAATGGCCTTAAATGGATATGAAATAGGAATTCAACGTAAAATAAAGCC
CGCTGAACATATTCAATCTATGGCTGATAAAATCCAAGATACCGTTGTCACCAAACATCC
TCTCAATACAGATCTTCTACCTGAAGATATTATTCGTGAGAACAATACTCCGAGAAAAAC
ATCAAAAAATGACAATTTGTTCAAACATATCGAATTGGGAACCATGAATGATAAAAATAA
AGACAATAATTTCCTTAATCCCATAGTTTATAATGGTAGCACTCCAGTACCACCACCATT
GCCTACTTCGCCTATACCAACGTTTAATATTCACAGTACACCTCTTGGAGAATCAATAAT
TCACAATAACATAAAGCAATCGGACTTTCCCATTTATTCTAACGTCGACGATGATTTAGA
CTCCCAGTATGTAATTTTGAAAGAACCTTTAAATGATACCGATCTCAAAATTACTGATGA
TCAGAAAGATACTATCAGTACTAAAAAACCCGTGAATCAATTTAAAAAGACAAATGGTTT
ACATACACCGTTGATAAACGGAATTAATTCAGTAAAACCAGAGAAAGAACTTGATAACAG
CTTAGAGAATCACATCTACTCAAACACTTTGAAAAAAAGACAACTGTTTGAAAACAAAGA
AGATACTAATGGACATAAATTTACACCAAATGAAATAAAAAATGACAAAAAAATCAATGA
CATATTTTCAAAAATTAATGCTGCACATTTCAAACAAGATATTTACGATGCACCTGCACC
GGTGCAAGACAGAAAAGTAACAATACCCCCAATTTCTATCAAAGACAATACAACAGCAAC
TTCAAATACCCCTTCAACCAAAACCTATGAAAACGATATAGATACCATTCCGGAAACGAC
CAATGAAGATAAATCTGTGAACAATGATAAAGAAGAGGTTGTAAGGCGTAGGCAGAAAAA
GAATATCAGGAGTGATGACGGTAGAAGAGATTCTCATATTATAGCGAGGCCACTAAGTAC
AATGACTTCCGTAGACGTGGAGGAAGGAATGTACCCGGTTTGTCACATTTGTGACAAAGC
TATAACGAGGGGACCATTCATCACGGCTCTTGGACGCATATGGTGCCCTGAACACTTCAT
CTGCGTGAATGCAACATGTAGACGCCCGCTGCAAGATATCGGTTTCGTCGAAGAGAACGG
ACAACTCTACTGTGAATTCTGTTTCGAGCAATATATAGCACCAGCATGTGACAAGTGTCA
TGCCAAAATTAAAGGCGATTGCTTAAATGCTATCGGCAAACATTTCCACCCGGAATGCTT
TAACTGCGTCTATTGTGGAAAGTTGTTCGGAAATAATCCATTCTTCTTAGAAGACGGACT
ACCCTACTGCGAAGCAGACTGGAATGAGCTCTTTACCACAAAATGTTTTGCTTGCGGATT
CCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTG
CTTCAACTGCACGGTCTGTAAAAAGAACCTCGAAGGACAGAGCTTTTTCGCCAAGGGAGG
GCGACCTTTTTGTAAAACGCACGCCCGTTAAAAGTCCAATCAAAATAATTTACAACTCAG
ACACTGTTTATTCGACGACTACTTTCCGTCCCGTTTCACCGTCGCCGATCACACCGCCTG
CGATAAGTACACCGTCCCCACAGAGAACCAGGAAGTTGGAAACGCCCCTCCACTTCGATG
GAGGACTGTTTTCCGACATACGAAGTACAGATGGCAAATTACTTAGCAAAGTAACAGTCG
ACAGAGTGCAACGTTCCACGCACCATGACGTCACCGACTCACCAAGTACTGTTGAAATTA
ATGACAAGAACTACGTCGA
(3139 bp)

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