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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26811_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735409_[Bombyx_mori]
Ontology
GO:0003756 F protein disulfide isomerase activity
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006457 P protein folding
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016222 C procollagen-proline 4-dioxygenase complex
GO:0016853 F isomerase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0034976 P response to endoplasmic reticulum stress
GO:0042470 C melanosome
GO:0044822 F RNA binding
GO:0045454 P cell redox homeostasis
GO:0046598 P positive regulation of viral entry into host cell
GO:0046982 F protein heterodimerization activity
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:9.26 TPM:7.80
ORF EntryO_TrvaMG14257_5prime_partial:A_TrvaMG_comp26811_c0_seq3
Sequence
(Nucleotide)
TTTTTTTTTATAGAAAAATGTATTTATTTAACAAAAAAAATTACAGCGCCGCCTCAAAAA
TACAACGAAACAAAATAAATATGTTTATAAACATCCATGCGAATACCCGATCATACATTA
CAACTAACATATCGACAGCATGGTCACACACGACAGCACTGCTCTGTTCGAATGTTGCAC
GCGGTCAATCTTAACATACTCTAAACTCTCTAAACTTAAAACAATATGACGAATAAACGA
AAGACTTGATTTGAACATTTCTATGACCGTGCGCAACAATTAAACAATACAATTAATGTA
AAAAATTAAAATGATATTGACTTCTCTAATGATTAACGGCACTGAGCTTTACAAATATTT
TCTGTACTATTTTGCCTGCGAGTGGTAAGTTTTCTCTTTGAAGGCTTCACACAAGTTGCT
ATGGTATAATACAAAATAATGAGATTCCATGAAGACTAGAAAACTATATGAACATGAAAT
CCTTACAACAATTATAAGTCTTTCAAGATGTCACGGCAAAATACAATATAAAATGCCTAA
AAGTTGTTTTACATCGTTTCACATCTAAATATTGGAATCAATTTACAATCAATTAACGAT
TTGTACAACAGATACTAAAGTCACTAGTCATTCCAACATTTAGCCTTCATTCGATCTTAT
TTATTGATAATCTTATATCGAATCATTGACAGAGATAATTCAAACAGCGCTCCTACAAAG
GCTGCAGATGTGAAAGAGCCCCAAGGTCCTCAATACGACAACCCTGTCAGGTGCTTGCAG
GGATTCAAGGGACACGAGGTTATTTCAAAGCTAATGATGTTATTACAACAATGAGTTCCT
GATGCAAAGTTAGACTTATGCTATTGACTATAGAGTACAGAAGAGGTTGACAGGACAGAC
TGGGAGTACGATAACATTCGTGTCCGCTTGATGCCTCGCGTGCACATCCCACAGCACTAA
CATCGACTGCAGCGCGACTGTGGATGTTGTAATGGAGATCGACTGTATCATTCATACAGA
CGTGGTCATTTATTAATTCAGTTTAGTCTATGATATTTGTTAGGAAAACGAACTCCCGTT
GATTATGTTGTATTCGATCAACCTCGATTACAACATCCACTGTGGCTGTCTCTTTACCAC
CACCAAATATTATCTTCTTCAACACCTTTTTTCCCTTTGGTCGGTTTGTCAGGTTTGGCG
AGGGCCTTGTTCTTGCCCTTCGGTTTGTCCTTCTCTTTGTCCTGCTGTTTGGGTTTGTCT
TGTTTGTCCAGTTTCTTGGGAGGCACCTTGGTCGGCGTGGCCTTGGCGACTTTAGTCGGG
CTCTGTACTTTAGTGGGACAGCACTGGTAGGGTTCGTAAGTCATTTTTGGGACGGCCGGT
TTCGCCCCCAATCCAATGTAGAAACAGCGATCGCTTTTTTGATCTACAAGCCACTGCAGA
ACCTTATTTTCGTTCTTTAAGTCACCGTCATACATGATGGGCACGCCGGTCTCGTAGTAG
ACGAGCGCGGGGAAGCTGAAGATGCCGATGTCGGTGGCGAGCTTGGAGTCCCGCGACTTG
ACGAACTGTATGCCGTGCTTGTCCGTGTCGTCGTCGATGGTCTCCAGCTCCTCGAGGATG
TCGTCGCACGTGTCGCAGTCGTCGCTGTAGAAGAACACCGCCAAATGTTCAACGTCATTG
ATCAGATCCTTCAGCGTCTTTCTGTCCACATTCTCAATGATGTCCGGCTGAGAATCATGG
AGTTCCAGCACCCATTTCAAGATGGCTTCCTCGTGCATCAGATCTCCTTCGTATATCGTC
CTGAACTTGTGTCTGTAGAAGGCCAAGGCGGGTAGTTCTGTGAGGTCGTACTCCTTGTCG
ATCCCGTTGTCGGATGTCTTGACGAAATCAATGTCCTTCTCTTCGCATTCGTCGTCAATG
TTTTCCAACTCGCTGAGGATTTTCTGGGATTTCTTGTCGCCTTCTTTGTAGAAGAACACA
ACAACATGATCGTTTTCTTCTAGAATCTTCTCCAACATCTTGGAGTTGACCTCCTCGATT
TTACCGGGGATCTCCAGGGTGTTCTCGTCAGTCAACCACGCCAGGACTTCGTCTTCGTCT
TCTATATCACCCTTATAGACCAACGGGTCCTTGTTGCGGAAGAAGACCAGCGTAGGGAAG
GTCTTGATGCCGTACTTCTTGGCGAGGCTGGTGTCCTCGGTGGTGACGAAGATGATGCCG
GTCTCGTCCAGCTCGTCGTCGATGTTCTCCAGCTCGTCCAGGATGTTGTCGCACTCCTCG
CCTTCCTCGCAGTTACCACTGAAATACACAACGACGTATTCGTGCTCTTCAATAAGATCG
ATCAATATCTCATCCGTGACCTCCTCGATGGTCGCACTGTTCTTCTGCTCGATCAGCCAC
TCCAGCACCTCGTCTTCATTCATCAGATCCCCTTCATATATGGCGGGGATGTTCTCCTCG
AAGTAGACCAGAGTGGGGAGATGGTCTATTCCGTATTCCTTGGCTTCTGCGTCGTTGTCC
ATTCGTACGATGACAATGCCTTCCTTTTCGAGTTCATCGTCAATGTTCTCAAGTTCATTT
AGGATTCTGATGTCTTGTTTGTCGTCTTTGTCATAGAAAATAACAGCCAAGTAAGGAGTT
GATTCAATGAGTTTATCCATCATTTCGTCTGTGACTTCAGGAATTTCGCTGTGCCGCTTC
TGATGTAACAACCATCCAAGAAGCTCATCCTCCTTCATCAGATCACCTTCGTAGATGTGA
GGGATTCCCTTCTCGAAGAACACCATGGTTGGAATGGTTTCAATACCGTACTCCTTAGCT
TCTTTATCATCATCGATCTTGACGAAAGCGATGTCATTCTGATCGCACTCATCATCAATA
TTCTCCAGCTCAACCAAGATCTTCTGGCTTTTCTTCTGGTCCTTGTCGTAGAACAAAACG
GCGACGTACGGCATCTTCTCGATGATCAGGTCCAACATCTCATCTGTAATATCTTCGATC
TCGTCGTTCTCTGCTTGGTGTTGGAGCCACTCCAGTACTTTTTCCTCTTCTTCCAAGTTT
CCTTCGTAGTATGTGGGGATTCCCTTTTCGAAGTACAATAATGTTGGTATTTTTTCGATG
CCGTATTCTTTGGCTTCCTCATCGTTGTCGATCTTCACAAACGCGATTCCCAGTTGGTCA
CATTCATCATCAATGTTCTCCAGTTCGTTGAGTACTTTCTGTGATTTGCGATCGTTGTTG
TCATAGAACAGTACGGCTACAGTTTTGCCGTCCTTGATGAGTCGGTCCAACATCTCATCA
GTAACATCTTCGATTTCATCCTTCTCCAGTTGGTCGACAAGCCATTCCAGCATCTCTTCT
TCATTCTCAAGGTCGCCATCGTATACATTAGGTATTTGTTTCTCGAAGTAGACAATGGAC
GGCAGGTTGTCGATACCGAACGCTCGAGCTGCCTTCTGATCATCAATCTTCACGAACTGG
ATGCCGTGACGGTCGCAGTCATCGTCTATCTTTTCCAGCTCGTTCAGTACTGTCATTGAT
TCGTCGTCTCCATGATCGTAGAAAAGTACAACAAGATGATCGACGTTGATAATGAGCGTG
TTCAATGTCTTGGCTGTTACGTCTTCAATGACGTCTTCCTCGTCGCCGGTCGACTTGTTG
GCAATCAGCCACTCCAGGACGTCCTCTTCCCTGCTCAGTTCACCTTCATAGATAATAGGT
ATTTGATGCCTGTAGTAGACGAGTCTTGGCAGTTCTCCAAGACTGTACTCCTCGGCCAAT
TCCTCGTCGTGGATCTTCACGAAACCGATCCCGAGCTGGTCGGCCTCGTCGTCAATGTTC
TCCAGCTCTTGGAGTGCCTTCGCACATTTCTTGCACTCCGGCTTGTTGTTCGACGGGCCG
CAACTTTTGTGATCAGGACAGAATAGAACAGCTACGTAGTCGGTTTCCTCGATGATTTTC
GCGAGAATCTTTTGGTTGACTTCTTCTATCCTGTCGGGAAGGTCCATCGCTTCTAAGCTC
GTCAGGAAATCCAGAACACTTTCTTCGTCCATGAGATCTCCTTCGTAAATGATCGGTTCC
TTCTCACGGAAATACGTGAGGGCGGGAAATTTCGTGATGCCATAGTGTTTCGCGAGCCGC
TTATCGTTGATCTTGACGAAGTCCACGCCGAAGGTGTCGGTGTCGTCGTCTATCTTCTCC
AGTTCATCCAGCACTTTGTCGCATGTCACACAGCTTCTTGCATACCAGTAGACCGCGACG
AAGTCCTTCTCGGCGAGTACCCGGTCGAGTTGTTTGGCGGTGACCTCCTCGATGCGGGGC
TCGTGGCGCGAGGGCGGCGGCGCGGCGGGCGCGGGCGGCGACTTCCTCGCGGCGGCGGCG
GCGGTCACCCGTAACAGGGC
(4400 bp)

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