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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26803_c2_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.96 TPM:0.81
ORF EntryO_TrvaMG14215_complete:A_TrvaMG_comp26803_c2_seq5
Sequence
(Nucleotide)
GTGTTCCTTCGATAGCATTCGGTGCCTTTGCGTCCTTGAGATAAACAAATCGGAGTACGT
AAACAAGTGCATTAGGGTAAATAACTCGTTAATAAATGTTTATTTATTAGTTTAACGTAG
GACTAGAAACGATCGGTGTATGTGGGCAATGATTATGGTCTGTTAACACGGTGTCGATCC
CGTGGGTGTCCACAACTTGAGAACAGCTTTCCGATTGGCCAAGATGGATAGGACAATGTA
TGGCAAAGTGCTACCAGGCACTTATTATCCATTCCGCTGCGCGATGAAGGAGAACGGAAT
ATCGCCCGGCTATGCCCTACTTGCCGATCTTCAGAACTCCATCAATCCAGGAGCTCGAGT
CAGCAGCCCCGGTGGTAGAACAACATCGCCTGGCGGTCGAACCAGCTCTCCAGGCAGAAC
GAGCTCTCCTCTTGGAAGGGGAACGTCACCAGGTCGACTGAGCTCATCAGGCAGTTTGAG
TTCACCAACGTCCACTGGTTATGGATCAATAAACGGATCTAGGAACATTAATTCGGATTA
CGCTAAACCTGCTTCGCCCACCTACCAGAACACAAGCTCATTCCACACAGAGAAGATAAT
CCCTCACAAATATACCAGCAACGTCCAAAGTAACTACAGTGCCCACTCGCCTGGCTACGT
GGCTCAATCGCCAGGCTACGGCAGGACTGGTGGAAGAGGCAACCTGAGCGAATTGGACAC
TCTACTGGATGACCTGAGCAGCGCTCGGTACGGAAATTATACTGAGAAGAGTTTTACTGA
AAGATCTTTAAATGACAGCTACGGTCGCAGTAATGGAGCCATCAGTCCAGCGAGACCGAC
AGTTGACTCTCTGCTTGATCAACTCAACGCGGACATACCTAATGGCCGCCAATCGACATC
TCCGATACCACCATCGACGGGAGGTACTCTTCCCCGTCCGGGCACCAAGCAGGTGACGGT
GACCGTGCAAGAGACTGTCGTGGAACCCGCCCAGGCTCAGCAGCAGATCCCGGTGGCAGC
GCCGGTGGTCAGGCATCAGCACCACGCGTCTAGCGCCACGAGGGAACTCGATGACTTGAT
GGCATCTCTGTCTGATTTCAAGGTGAGCGGCCCCGGAGCACCCGGAGCAGACAGCGGCAC
TCACGTGTACCGAGAGAAGCGCGCGTGGCAGGAACAGTACCGCTCCACCCCGCGCCAAGC
CGAGTCCGCGTCCCTCGAGCACATGCTCGGATCTCTCCGAGCAGACATGAGCCGCCAAGG
AGTACAAACCCCCCAGAAGGGATGCTGCAACGCCTGCGAGAAGCCCATCGTCGGACAGGT
GATCACCGCGTTGGGTCGCACCTGGCACCCTGAGCACTTCACCTGCGCTCACTGCAACCA
GGAGTTGGGAACGAGAAACTTCTTCGAGCGAGACGGCAGGCCGTACTGCGAGCCTGACTA
CCACAACCTGTTCTCGCCTCGATGCGCCTACTGCAACGGACCAATCTTGGATAAATGCGT
CACAGCTCTCGAGAAGACATGGCACACGGAGCACTTCTTCTGTGCTCAGTGTGGACAACA
GTTTGGAGAGGACGGGTTCCACGAGAGGGACGGCAAGCCTTACTGCCGCGCTGATTACTT
TGATATGTTTGCCCCCAAGTGTGGTGGTTGCAGTAAGCCCATAATGGAAAACTACATCTC
CGCACTGAACACACAGTGGCATCCAGACTGCTTCGTATGCAAGGAATGCCGTGAACCATT
CCACGGAGGTTCGTTCTTCGAGCACGAAGGTCAGCCATACTGCGAGACCCACTACCACGG
CAAACGAGGCTCGCTGTGCGCCGGCTGCCACAAACCAATCGCCGGAAGATGCATCACCGC
CATGTTTAGAAAATTCCATCCGGAACATTTCGTCTGCGCATTCTGTCTCAGGCAACTGAA
TAAAGGCACATTCAAAGAGCAAAACGACAAGCCGTACTGCCACGCGTGCTTCGATAAGCT
GTTTGGATAAGATGGCGGCGACACACAAAATGGCGGCAGGTTTTTGGCGGGAATGTTATC
GACGCCTGATGTTTTATCTTTCTAATTACTGATGTGAAGATAAATAAATAGTAATAGGTC
ATGAACTATTAAAAATAATGCATAACAAAAGCAGGCTAAAAATTCTTGTAAAAATCGACA
AAATGGCGCCTGTTCTGACATCAAAATGTCGGAAACGATAAAACTTTTTGAACGTTAATC
GAATGCGATATTCTTATTGTTATAACGATCTAGTAATTGTAATTAATAGTTAGATGTTTA
CGTTAATATTTATGAGATTTCAAGTCTCAACTAATTATATAGAACCGTCTGCTCACGGGT
AAAAGTAAAATAGCTCATAACGAAAACAAGAGTAAGTTTTAGGTTTATAAACATAATATT
TATATTGACC
(2410 bp)

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