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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26803_c2_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.73 TPM:3.98
ORF EntryO_TrvaMG14209_complete:A_TrvaMG_comp26803_c2_seq1
Sequence
(Nucleotide)
TTTTCGTGTTATTAACAGTATTAATAAGTAATCCATTGCTCATTTAAGGATAATTAATTC
TCCGATTGTGCCAATAGTTTTATTCCTATTCATAATAAGTGTTAGTGTTGTGAAGAAGTT
GTTAAAAAATCAGAAGAAATATGGATGACCTAGATGCCCTACTTGCCGATCTTCAGAACT
CCATCAATCCAGGAGCTCGAGTCAGCAGCCCCGGTGGTAGAACAACATCGCCTGGCGGTC
GAACCAGCTCTCCAGGCAGAACGAGCTCTCCTCTTGGAAGGGGAACGTCACCAGGTCGAC
TGAGCTCATCAGGCAGTTTGAGTTCACCAACGTCCACTGGTTATGGATCAATAAACGGAT
CTAGGAACATTAATTCGGATTACGCTAAACCTGCTTCGCCCACCTACCAGAACACAAGCT
CATTCCACACAGAGAAGATAATCCCTCACAAATATACCAGCAACGTCCAAAGTAACTACA
GTGCCCACTCGCCTGGCTACGTGGCTCAATCGCCAGGCTACGGCAGGACTGGTGGAAGAG
GCAACCTGAGCGAATTGGACACTCTACTGGATGACCTGAGCAGCGCTCGGTACGGAAATT
ATACTGAGAAGAGTTTTACTGAAAGATCTTTAAATGACAGCTACGGTCGCAGTAATGGAG
CCATCAGTCCAGCGAGACCGACAGTTGACTCTCTGCTTGATCAACTCAACGCGGACATAC
CTAATGGCCGCCAATCGACATCTCCGATACCACCATCGACGGGAGGTACTCTTCCCCGTC
CGGGCACCAAGCAGGTGACGGTGACCGTGCAAGAGACTGTCGTGGAACCCGCCCAGGCTC
AGCAGCAGATCCCGGTGGCAGCGCCGGTGGTCAGGCATCAGCACCACGCGTCTAGCGCCA
CGAGGGAACTCGATGACTTGATGGCATCTCTGTCTGATTTCAAGGTGAGCGGCCCCGGAG
CACCCGGAGCAGACAGCGGCACTCACGTGTACCGAGAGAAGCGCGCGTGGCAGGAACAGT
ACCGCTCCACCCCGCGCCAAGCCGAGTCCGCGTCCCTCGAGCACATGCTCGGATCTCTCC
GAGCAGACATGAGCCGCCAAGGAGTACAAACCCCCCAGAAGGGATGCTGCAACGCCTGCG
AGAAGCCCATCGTCGGACAGGTGATCACCGCGTTGGGTCGCACCTGGCACCCTGAGCACT
TCACCTGCGCTCACTGCAACCAGGAGTTGGGAACGAGAAACTTCTTCGAGCGAGACGGCA
GGCCGTACTGCGAGCCTGACTACCACAACCTGTTCTCGCCTCGATGCGCCTACTGCAACG
GACCAATCTTGGATAAATGCGTCACAGCTCTCGAGAAGACATGGCACACGGAGCACTTCT
TCTGTGCTCAGTGTGGACAACAGTTTGGAGAGGACGGGTTCCACGAGAGGGACGGCAAGC
CTTACTGCCGCGCTGATTACTTTGATATGTTTGCCCCCAAGTGTGGTGGTTGCAGTAAGC
CCATAATGGAAAACTACATCTCCGCACTGAACACACAGTGGCATCCAGACTGCTTCGTAT
GCAAGGAATGCCGTGAACCATTCCACGGAGGTTCGTTCTTCGAGCACGAAGGTCAGCCAT
ACTGCGAGACCCACTACCACGGCAAACGAGGCTCGCTGTGCGCCGGCTGCCACAAACCAA
TCGCCGGAAGATGCATCACCGCCATGTTTAGAAAATTCCATCCGGAACATTTCGTCTGCG
CATTCTGTCTCAGGCAACTGAATAAAGGCACATTCAAAGAGCAAAACGACAAGCCGTACT
GCCACGCGTGCTTCGATAAGCTGTTTGGATAAGATGGCGGCGACACACAAAATGGCGGCA
GGTTTTTGGCGGGAATGTTATCGACGCCTGATGTTTTATCTTTCTAATTACTGATGTGAA
GATAAATAAATAGTAATAGGTCATGAACTATTAAAAATAATGCATAACAAAAGCAGGCTA
AAAATTCTTGTAAAAATCGACAAAATGGCGCCTGTTCTGACATCAAAATGTCGGAAACGA
TAAAACTTTTTGAACGTTAATCGAATGCGATATTCTTATTGTTATAACGATCTAGTAATT
GTAATTAATAGTTAGATGTTTACGTTAATATTTATGAGATTTCAAGTCTCAACTAATTAT
ATAGAACCGTCTGCTCACGGGTAAAAGTAAAATAGCTCATAACGAAAACAAGAGTAAGTT
TTAGGTTTATAAACATAATATTTATATTGACC
(2252 bp)

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