SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26786_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		integrase_core_domain_protein_[Lasius_niger]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.95 TPM:1.65
ORF EntryO_TrvaMG14127_5prime_partial:A_TrvaMG_comp26786_c0_seq1
Sequence
(Nucleotide)
ATTCAAAGAAGCTGAAAAGCTTCTGGGCTGAGGCAGTTAACAGCTGTAAATATATAAAAA
ATCAATCACCAGTAGCGGGCTTAGATGACAACAAAACTCCTTATGAAATATGGATGGGCA
GAAAGCCAGAGTTGAATCACCTGAGGATCTTTGGCAGTCCAGTAATGGTTCATATCTCAA
AGGAGAAGCGAAGGAAGTGGGACAAGAAAGCGAAGAAAATGTTCCTAGTTGGATATTCTG
AGAATATCAAGGGCTATCGTTTATATGATCCTACATCGCAGGATGTTGTCGTAGCCAGAG
ATGTAGTTGTCATGGAAAACACAGATGACAGTTTAACAACATCTGGTGTGATTGAGGAGG
GCACACAACCAGAAAGATCAACAGAGAAAGTTCCAGAGACAGATTCAGATGAAGAAAATC
AGAATGATGAGACATATGTCCCGGATAGTTCAGCAGATGACTCAGAAGTTTTGTTGACAC
CATGTCACCAAAAGAAGAGGATGTCTCACAGAATTGTGACTTGAATCTACCAGATAAACA
TGTAAGACGCAAACCAGTTTTTTACCGTAGTGCCAACATGTGTGTGGAAATGTCAGGTGA
GCAGATTTCTCTTGATGATGTTATGAATGGACCGGAAGATTGTGATTCATGGGAACTAGT
TGATAGGCCAAGTGAAGTTACGGTTGTGAAAAATAAGTGGGTGTTTAAAAGGAAATATAA
TATTGAAAGTGAAGTGCGTTATAGGGCCAGACTTGTTGTGGGCTTTACCCAGTAGGAGGG
TATAGACTATAATG
(794 bp)

- SilkBase 1999-2023 -