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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26781_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739826_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:9.04 TPM:7.61
ORF EntryO_TrvaMG14115_complete:A_TrvaMG_comp26781_c0_seq1
Sequence
(Nucleotide)
TTGAGGATTTGTATGAAAAGAACGAAATAAACTTCTTTGTTTTTAATGATTCATATTTAA
CGTCAGTATAAGGTACAATGGAACATTGAATCACGGGCATCTCAATTTAATAAAGAAAAA
TATAATCTGCAGGGTGATAAATGATATACAAAAAAAGTGAGATTATTGCAACGACCGGAC
CGAATACGAATAAATAATCATTTTCCAATAAAATAAAACAAATACGTTAATTTATTTTAC
AAATTCCTATGTTATATCTCTCTGTTTATTGTATCACAAGTTCAGTTGGCGTCGATGGGT
TCTGGTCGCGGGCGCGGGGCCTGCGAGGGCGTGAAGCCGGGCGGCAGGGGCACGTACGGG
GGCCAGGCGGGGGCCACGGCCGGGGCACCGCCGTGCTGCGCGCCCACGCCCAGCGCGTTG
AACCGCATGAACATGTCGTGCTGGTGCTGCGACAGCGCGCCGGGCCCCGCGCCGTGCCCC
GAGCCGTGCCCCGCCCCGGGCCCCGCGCTGTGCCCCGCCCCCACTGACGTCGACATGATC
GCGGGGTCCATCTGCGTCCAGTCAGAAAACATTGGACTGTTCGAGCTGTAACCTTGATGC
GCGGCGTGATGCCTGGGTACTCCGACACCGAACGAGTTGTTGACGTGACTGAATCCTGGC
GGCGCTAATCTTGATCGACGCGCGTTGTCACCGCCCGAGACGGCGTTTTGCATCATTTCA
TTCTCCATTAGTTCTGCAAATGCTTTCTGCGTTTCCTTGAATGGATCGAAGTCCAAGTCG
TCGTCGCCGTCGCCCGCCGCGCGCCCGCTCGTCTCGTTGTTACGCACGTTGCTCATTCTT
TGTTTGTGTTCTAATTCGAGTGCCTCGGCGCTGAGCACGTTGTGAGGCAGCTGATACCGC
CTGTCATCAGTGGGCCGCGACATGAGCCGCAACTGTTGCGCTTTGTGGAAGTCCGTGAAG
AATTTATCCATATTTTCAGCTAAATACCGTCCTTCGCTATTGTGTGCAGCATCGAATCCG
TTGAGCATGTGAGTGTGTGCGGGCTGCATGAGCTGCTGGGTCCGCATCATGTAGGGCGAC
ATCACGCTCGGCGTCTCCACGCACATGCCGAACCCGCCCATGTTGCCGCTGCGGTGGTAA
TTACCTCCTAATAATTCACTAGTAGATTCCATTCCTATACTAGACGAGGGCATGAAATGT
TTAGGTTCGACCATAACACTGTGCTGCCTCGCCAACAATTCGTTCTGTCGCATCAACATT
TCATTCTGTTCTCTTTCCCTCATCAACATTTCCTTTTCTATCAAACCCTGGTTCATTTGT
GTAATTGGCCTATCGTTAATGTACGTTGGGTAGGGGTTGGTGAGGTGTCGTGTGACGTCA
CGCGGCGGGTCGGCGAGCAGGCCGTGCGTGTCGTCGTCGAGGAGGCTGTGCTCGCTGCCG
TCCAGCAGGTCGTGCGTCTCCAGTAGAGTGTGTCGCTCCGACTCGAGCTCGTCCAAGTCG
TTCCTGTAGTTGTCCTCGAACATTGAAGAGGTCCCGTTTAACATTTTACTGTCCTGTCCG
TTTTCATTGTGCTCGATGTTATTACTGTTTTTGTGTTTGTTTTTGTCGTTTTTGCTTTTC
TTGTGTGAGTTTGTGCCGTTCGTGTCTTTGTTTTTCGTTTTGTTGCTGTCGGTGTGCGAG
TCTTTTCCGTTTTTCGTGGGAGCGTGTGATATTTGCGTGTTGTTCTGTAGTTGCGTGGGA
CTCGACGATTCTGATGTACCATTTTCTTGTGACTTAACGTGTGATATCTGGTGCATGTGC
TCGGCGGCGGGGCTGTGCGCGGGCGGCGTGGAGCCGAGGCTGGGCCAGGCCTCCTTGCCG
CTGCTGCTACCGCTGCTACTGCTGCTCGCGTCGCTGCTGTCGCTGCTGCTCGAACTGACA
TTAGAATTAACTACTCCGTTTATATTTGACGTTGTGACCACTGACGTTGATATAAAGTTT
GAATGATTACCATCTTTTGAACCGTTCTTTTCTGCATTCGTACTAGAATTACCGTTAAGT
TGTTTGTCTTCTATGTTTTTATCCCGTTGTTGTGTGGCTAACAGCTGATTGTGCAACTTT
CTCTCGTACACCTGATGGAGACCCGCGTGCATTTCTTCTTTCGTAAACGACGCTTTGGAA
TCACCTAGGTCGTGCAGGTACATGCAGTCGGGCTTGGGACAGGGCTGGTTCTTCATGAAG
TTGGCGCAGTACTTGGTGGTGCCGAGCGAACCCTTCAGCACGCGTCCGTCGAGCGTCACG
TTGTTGACGCCCTGGATGGCGCGCAGGGCGTCCGCCGGCGACACGTACGTCACGTACGCA
GACGCGGACGGACCCTGTGACCCTGCATATGTCGTACTTTGGTTTATAACTACTTTGTGA
ATTTTGCCATATTTTCCAAAGTACTCTTGCCGTTTTAAAATCTCCGGGTCTGCGAGTCTC
ACGGGCAGTCCCACGACGAACACAAGGTTGTTCTGTACGACGCGCACGTTGGCGAGCGCA
CGTCGCGACTCTAACGTCTTGTTGCGACGTTTCTGCTCGCGAGCTTTCTTCTCCGTCTTT
ATCGCGGCCACCTGCTCTTGGCTGAGCGGAATGAAGTCTGCCGGGTTCTCTGGGTATGCT
TTCCGGCATGCGGGACATAAACCATTCTCGCCTTCCCGGATACGATTCCAACAAAACCGA
CATATTTGGTATCCACATGTGCACGGGTAGAAGTGGAGATCGTCCACCTCCAGAGGTTCC
ATACATAGTGGACATTCCACCTGTTCTTCTCCACTCTGATTCAACACTGACATCCTAGAT
CCAAGAGCAAATGGTTCCAACCTGCCTATTGCAATTGATGTCAGCTTTCTCCCGACAATA
ACCTTACGTCTCCTCTCAAAGCAAATCTTTTTTCTGTTGCAGAACCAAGACTGCTAACCC
TTCAGCTAGAGACGAAGATTAATCCTTTCCAAAGGACCAGTAAGGAGCTTCACGAATCAA
TTTAAATTAAAATGCAAAGCTGAAATAAA
(3029 bp)

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