SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26776_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cullin-2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:5.54 TPM:4.66
ORF EntryO_TrvaMG14101_3prime_partial:A_TrvaMG_comp26776_c0_seq2
Sequence
(Nucleotide)
CGCGCCCCCGCCGTGCCCCGCGCCGCACACCCTCAGCCGGGACCGCTTGCTGCTGAAGGA
GGCGCTGAGGGCGAGCGCGCCGTCCTCCTCGCGCCGCACCAGCCCCGCGTCCAGCAGCGG
CGTCACCTGCGCCTCGTCCTCCACGAGGTCGGCGACGCGCGGCGGGGCGAGCGCTCCCTC
GGCGTCCAGCGCCAGGAGCAGCGCGCACTGGGCGGTGGAGGCGGTCACGTGGTACACGCG
CGGCGGGTAGCGGGCGCGGATGTCGCCGGTGCACAGGTGGTGCAGCCAGGCGAGGCGCCG
CCCGCTGAACGTGTCGCGGTACCACTGCTCGAACAGGCGCGCCGGCCGCTCCAGGGGCAG
CGGGGGGGTGCGCGGCGCGGAGGGAGCGCCCAGCGGCCACGCGCCCGCCTGCAGCACCTG
TATGTAGAAGCCGGTGCCGAGACTCTGGTCGGAGTCGCGCACGTGCTGCATGAACTTTGC
GTTGAGGTCGGCGGAGACGGCGATGTCGGTGAACATGCGGTGCAGCTTGTTGGTGAACTC
GTAGCCGCACGCCGCCTTCAGACGGTTGATCATGGACTCCTCCTGTTCCATGGAGTATGA
GAGCTGGTGTATGAGTCTGCGAGCCAACGTGCGCGCGTAGTGCTTCTGGAAGATATCCTT
ATCATCGATGTACTTGAAGACGACGATGGCGGCCGCGAGCTTGTCGTCGACGTCAGCGGA
TGCCGTGTGCAGCGGGTTACTGCGCCGGCGCAGCGCCGAGTCACAGTACCGCGCCACTAG
CTCCGGCGCGCGGCAGTACTCGCCGCCGCATCTACTGTTCACCACCGCGCTGCACGCCTT
GTCTAGCGCGCCCATGAAGGGCTGAGCTCCTCCGAACACGTCGTGGAACAGTTTGCTGTA
TTTACCGTGCAGAGTCAACATGGCGTCCACGAAGTGAATATGTACCTCGTCCTTGTTGTG
TTGCAACGCGTCAGTGAGCAGCGCCTGTCCGTGTTTCTGCGCATGCGCGAGCGCCGCGTC
CACCAGCGGGCGAAGCGCGGCGGCTCCCAGCGGACGGACCAGCTGGTACATGCGGGACAG
ATCCTCGCGACGCTGAGGAGCGTTTTCATCGTCAGCGCTCGCCTCGGCCAGCAAGCGGTC
GACGTCGGCGTGCAGCGCGGGGAGGTGGGCCGACACCGCGGCGCGCTCGTAGCACGCGCG
GACAGACTCGCGGGACGACGCGGGCAGGTAGCGCTGAGCGAGGGACACTTCGCGTTCCAG
CCCTGCGAGCACGTGCTTCATGTAATGCGCTACATCTCCGTCGTGCAGTAGATGTGACGC
TATTCGCGCGTGTTGTTCCCCCGAAGCCTGTAGGAAGGGCTCCAACACGAGCTGCTCGTA
CAGGGACAGCGGGGAGCGCACGCGGAAACTGCGCACATCGACGGTGCTCTGTATGGCTTG
TCGTATGACGTCAGCGTGTCTGGGGTCGGTGTTTTGTTCCCGCGCGTGGTGCAGTGCGCT
GACGATGCGCGCGGTGAGTGCTCCGGCGAGCGGCCGCACCAGCACGCGCTCCCAGATGTC
GAGACCTAGCTCACCCACCTCTAGTTGTCGTGCGTCTTGTTCGGGACAGCTGACGGTGGC
TGACGTGCCGTATATAATCTCCGCATCTGATACCTTCTGTCGTTTGACGTGTTGCAGGTT
GAGGTACGAGTAGAGACTGTTGAGGTAGGCCACGCCCTGGCTGTACTCGCGCCACGCCGT
CACATACCTGTCTAGTAGTCCGTCGTTGTGGTCGGAGGTCTCGAGTGTGGTGTTCCCGCA
GACGCGCTCTAACAGATTCTTCACGTGCTCCTCCAGGAAGTTCCTGGTCTCGTCGTATAG
TTTGTCGGCGAGCGGCTCGGGGTGCGCGACGCAGAGCGCGTACACGTCGCTGAACCGAGT
GTTCCACACCATGCGGTCCACCGACTTCAGCCCCACCACGCCCGCCACCGTCTCCTTGAG
GCTGGCCCATGTCTCCTGGAAGTCAACATGCCTCGGCTTCAGTGACATCATCTTGAACTA
TGAACATGTACAAAGTGATTATTGTATTAATTTCAATTCAGTAAAACGTCCTTTATGATT
TCGACTCGTTCTTTGTATATTTTATTCACGATTTTTATTATTTTTCCTCCAAATATGTTC
ACATTAATTTTCTTGTAGACTGATTTGAC
(2189 bp)

- SilkBase 1999-2023 -