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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26770_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_proline-rich_extensin-like_protein_EPR1_[Amyelois_transitella]
Ontology
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
Transcript
Level		FPKM:4.25 TPM:3.58
ORF EntryO_TrvaMG14080_complete:A_TrvaMG_comp26770_c0_seq2
Sequence
(Nucleotide)
GTCACATCCTGTTGTGTTGGGCTAGTGCATGGCCTCGACGTCGAACTCGTTCCAAAATTA
TTTGTAGAAAGCCGCCGCTGTTTATTTATAATATTGCGGCATTAAATTTCGTGATGGTGT
TCTCATACAGGCCATGGATTTAATGAAAACGGAATATGAGTTCCTAGACTTATCTGATGT
GAAGGGAGCAGACCTGAACAGTCTGCAGTGTGCACTATTCGAAAATAAATCTGATTCGAC
GGCGGCCATAAACAGCCACGGTCGCACGGAACCCGCAATAGAAGTATCATCTGGTACGGG
CACGACGAGAGTTCCGACCGTGTCGAACAGCGTGGACAGTCTGTCGGGCGGCGAGGGCGA
GATGGCGCCTCACTCGCCGGCGCGCAGCGGAGCCGGGCCACCGCCGCACCCGCCGCCCTA
CGCCCAGCCACCGCCCACGTACCCGCCGCCACATGCCCAGTGGCCCGTCGCGCCGCCCAA
CGTCTACGTTAGCCAGGTCACCGCTAATGTAAACGTGCACGGTTACATGGGCCAGTACTA
CCAGCCGCCCACGCCGCAGTATGTCCCGCCGACACAGGAACGCGCGCCACGCACACATCG
ACGCGACCGTCGCGGCAAACGGCAGCCATCTCCCCCGTCACATCAACCCCAACCCTACTA
TTTGCAGTACCCACAGTACTATCCAGCAGCTCAGGCGCAGGGTGCTCCACTTTACCATCT
GCCCATATATCAACCCTTGGTGTATGGGCCATATGCCTACCCTTCATATTACCCAGAGTA
CCCAATGCCTGTAGAGGGTGATGGAGAAAAGGGGCCTGAAGATTATCCACCTGAAGTGGT
TATGGAACAAGAGGCAGTTGATGCCTATTACGCCAGTGCACACTACGCTCCACCTTACGG
CCCACCAGTAGAAGGAGCCATGGAGTATGTGCCGCCACTGTACTTGCCATCGCCGCACCA
TCCACCGCCATTACAGCCTCCTCCGCACCACCATCCGACCCCACATCAGTTTAATGTTCA
CGCGAAGAATTTCGTACAAGGACAAGGCAGGAACTACACGCCTCCTGATAATAAACCACA
GGAACGACGCACACCACCGACGGCAACTGCAACCGCTTCAGCAAACGTCGACGGACTCCC
TATTAAAGATCTCAAAATCGCAAACAAAGGACCCAGCAGCCCCAAACAAATTGAAAAACC
TATCGAAACCAACCAAGTCAAGCCAATTCCTGCAATTGTTGATAAAGTTGTCCAGAAGAT
TGATCCAAAACAAGTCACGCCAATAAATGAGAAAATCGAAATTCCCAACATGAATCAGGT
TCAATCAGTTGCAAGGACTTTCCTGCCACAAACTTCAGCAGCTGCCTCAACTGTCAAGAT
CCCACCTACCACAAATAAAGCGGCCAAGGGACCATCTGCCCCATTCTCGAGTGGAAAACA
ACCTCCGAAACCAACTACGCCACAAACAGTTGTACCAATTCAGCATACTGTGTCGACTCC
GAAAGCGCCATTCGGCAACAGGCAGAAACGTGACGGCCCACCAAACCGATCTCCTTCTAA
TGACGTCGCTGATGAAAGGTCTGTTGTCACAGAACACATAAAGAGGGAACCACCTCTACC
TCCAAGTAAAGCGCCAATGCCGATATCTATTACGCTACATTCTGCTGGACAGCCGCTGAT
TGTGACTAGTAAAGCTCCTTTTGGCCATTCGAGGAAGACAAGTGGTGCACCGGAACCCCC
TCCAGTGCCACAACCCCCGCCGCCAGCGCCGACCGCTTCAGATTTCCCACCTCCACCAAC
ACCGCGGAATCGCACGGAACCCCCGCCGCCTGTAGTTCAGCCCCAACCACAGCCGGCTCC
AGGGAAATCTTGGGCGAGTTTGTTCTCATCAAAGCCTAGTGTACCTACACCTGCGCCCGT
CACTGTGACAGCTCCCGTTGTTGAAGAATCTGGGAGCCCGACATCTACTACGCCACCGGT
CGCCCCAAACTTAAAGCCTGTCGCTAAAGTGCCCCCATTTGATGCCTCTCCTTTCGCTGG
TGTTGTCCCTGAGAAAAACATGGTTTCCGCAGCCGTTTCATCTGTGTCGTATTCTGAGAA
GACATCAGTCAATTCTGGTAGTGCTCAGGCAGCCCCAACTATCAGTCCCAAGCCAACAGC
CCAGCCTCAAAACGAGCTACGTGAAGTTCCAATACAACGTGATTCTACACCGGCAGTATT
ACCGCAGCCATCGCCTTTTAGCGACGACCCCAATTCGTATCGGATGGGAGAGTTTTTGAC
TAAATATCAGTTGGACCACCGTCCAGTCGCAATCTTGCCTCGTGGTCTCACTAATCGCTC
CAACTATTGCTATGTGAACGCAATACTGCAAGCGTTGATCGCGTGCCCGCCGTTCTACAA
CTTACTCAAAGCTCTACCGTACCAAACTCGTCGCGGTAAATCTAGCACGCCAGTTATTGA
TTCTATGGTGGAACTTTGCTACGAATTCAGCGCGAACGGTACAACGACGACCACAAACGG
TCGTGGCCGCGGTACCAGCGCTAACGTAGCCAACACCGCTCCTCTGGTACCCGGCGCTCC
GCCACTCGAAGGAGGCGCCGGTCTCAGGGTGTTACGGGCATTAAGACCCTTCCCAGGGTC
ACAGGATGGAAGGCAAGAAGATGCAGAAGAATTCCTTGGATGTCTACTGAACTCGCTTAA
TGATGAAATGCTTGAGTTGATGAAGTTAGTTGAACCAGATGAACCGAAAGAAACAAACTC
TCAACCCAACGGTATTGTTACTGCTGATCAATCACCTGAAGAAGAAGATGATGATGATGA
ATGGAAGGTAATGGGTCCCCGTAACCGCGGCGCCGTGGAGCGTCGTTGGGCCGCGCGTCG
CACGCCCGTCGCCGATATATTCCGCGGTCGAACTCGCCTGCGTCTTCATCGAGCGCATCA
TCATGACGTCACCGACGCTGTACAACCTTTCTTTACGCTACAACTTGATATTGAGCGTGC
AACAAGTGTAAAAGAGGCTTTAGAATTATTGGCTGGTAAAGACACTTTGGAAGGAGTCAA
TGATGCATGGCAACAGTTGGCATTGGAAGAACTTCCAGTCACTTTGCTGCTGCATCTCAA
GTGTTTCCAATTTGACCAGGATGGGCATACCGCTAAGATTGTCAAGAACATTGATTTCCC
TGTTGACTTGAAGATTGATCCCAAAATAATGTCATCAAAGCCAAAGTACACAACGAAGCA
ACGTTTGTACAAGTTGTTTGCAGTCGTGTATCATGAAGGAGTTGAAGCTGTTAAAGGCCA
TTACCTAACAGACACTTTCCATGGACAAGCTGGATGGATCAGATACGATGACTCCACTGT
TACTCAAGTGACAGATGTTCAAGTACTGAAACCGAAGCCTCCAAGAATGCCATACTTGTT
AATGTATAGGCGACACGATACTCTTCTGCCACATCGACCAGTGAAGCCTGAATGAGCAGA
GTTTACGTTCGCTCATTTCTACTTCCGAAGTATCAACATCCACGGGCATTTTTGGTAAAA
CCAATGTGTGCTAAGAAGTCATGAGTGAATTTGTGGACTGTTTCAGTGAGCAACTTATAG
TGCGGTGAAGTTAATATGACGTTGTAAAGTGAAAGTGTTGTGTAATAACTATGGCTTTTT
GATGTCAGTTTATGGGTGGAATGTTTGAATGTAAATTTATAACTGACCATGGTTACTGAA
TCCTATATCTCGGGCACTAATTTATGTGAATTTGGGCTGGAAAATTCGTTGAAATACTAT
TTTAAAATTGTAAAACCATGGGGATATCTTTACGAAAATCTTTTTATACTTTGTGCCTTG
TAATTCAACGAACCATATTGAGTACCCAAGTTTTGTAAATGTTTATATTCTTTAGGTAGT
TTATATCTTAACTAAACATGTATAAACAACTGAAT
(3935 bp)

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