SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26757_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_oxysterol-binding_protein-related_protein_6_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0032433 C filopodium tip
GO:0042995 C cell projection
GO:0097038 C perinuclear endoplasmic reticulum
Transcript
Level		FPKM:1.87 TPM:1.58
ORF EntryO_TrvaMG14011_3prime_partial:A_TrvaMG_comp26757_c0_seq2
Sequence
(Nucleotide)
CGCCGCCCCCCGATACGGACCCCCGCACCTCATGACGACCGCTCGACCACGAGCTAGCCT
TAACAAAATTAAGTTTGCACGTAATATCAGTACCAACGCAAGCTATGTGCATATCACCAT
ACTGGTCCACCCAGCGCTGACCGCCGAACAAGTTGTGGACGCAGGTCGTTACCTTATTCC
AAGTATAATGGTCCCCCGTGGTCTTCAGCTTGACGTGGACCCTGCCCGTCGGCTGGAACT
CCATGGACTTCCCCCAGAACTTGGTCTTGATCCTCGCCTCCTGCCAGAAGCACCAGCGCG
AGGACTCGGCGTGGCAGGCCGAGATCGGGGGATGATGGGATACCTGTTCAGCTATAAACC
TGAAGCCCCGGTCATCTCTCACACACTCGTAAGTCTCAGCCAACAGCGGATTGAAGGGTT
TGGAGGCCGCCCTGTGCGCTGATGACGCGTACGCCGACACAGCGAAGGCGGCGACGAGGC
ACATGCGCTCCACGGCGCTGGAGCACTCGGCCGCCGCGTCCAACAGCTCAGAGTACTCTA
GCTCTTCGCAGAGACGCTGCAGCATATTAAGCGGCTCGTTGATAGTGACCGGCATGGATA
TCTGGCTGAGGTCCTTCCCGATGTTCTTATACAGCAGGTTCCACAATGTAGGCGCGCCGG
CGGCGGGGCGCGGGGCGGGGAGGCGCGTGCGACGGGACCAGCCCGAGTTGACGCCGGGCG
CGGGTTCCGCTACCACCATAGCTCCTTCTGAATTGTCAGAACTAGCTGATCCTTCCTCGC
TGCTCAAAGAACCGGCTTCAGAGGAGGAATCACCATCTAATTCTATTACTCCACTCTCAT
CAGGCGCGATGATTTCATTCTTATTAAAGTCATCGTCATGTTCCTCCGCGTCGAAAAACT
CGGAAGCGGAGACACAGGACGAACTGTAGCTTAATGATTGTTGAAATTGACGTGTCACCC
CATCGTTGTTTCCAACTGAGTTGATCTCCGCGATGTCGGATGCGAGGTGTATGCGTGACA
AACGAGACCTCAGCTCGGAGTTTTGCTGTAGCGCTGAGTTCAGATTTGTTCTAAGGGCAG
ACATGACAGATCCACCGGCCGATCCGTTAGAATCAGCTGCTTCCATTGCGGCCCTCAATC
TACTGCGTTCACAGACCATAGTAGCAACAATAGTCTTCAAACTGGCCACGAGGTCCTTGG
CCAGTACAGTAAAGTCTTCCCTCAGTTGGTGGTCAGGAGTCAAGCTGGTTATGGAAGCAG
GGCCCGCGACTGGGCCTAGGGCTTCGGCACCAGGTAGGGACTGAGGACGAGTGGCAGCGC
ATGCTATAGGCAAAGAGGCAGCTGAATTCGGTATGGATGACGCACCCCCTCCTGGGGATG
GAGGGGCGGTTAGGGCTGAAAGGGCCATGTGTGAGTTGGAAGGGTCAATGTGTGCAGTTA
ATTCGACTGAAGCGCATTTATTGCTAGATTTCTTCTTACGCAGACCAAATTTGCGACGAT
CTTTTTTCACGTTAGGTGAGGCACCGTCAAGGGATACATCAGTATCATGATGGACTTGCT
GTTGCATTTCCAAGGCATCTAGCAGCCTCTGAAGTTGTTGCACCGATAGTTGAGCCTGGC
CCAGTTCTCGCGATGCATTCTCTAGAGGACCACCCGATTCTATAATCCAGCTGGCGAGCC
TCCCGCCCGGCGTTCCAGACACGAACTGTGGACCTCTAATCGCGGCCGTCGTGGGACTTA
CCAGCCGTGATGAAGTATCTGTTGCTGGTAAGTCGTCGAGGGGAGCGTTGATTTTAGGGG
CTGATTCCCTCGCGCCAAATGTTAGGAGGTGTTGGCGGTATAGTCTATGAGCTTTGAGTA
CGTTCAGCCAAGTTCTGAAAACGTCAGGTGTCTTCGCTCTCAAGTGGTAGATAAACTCGT
CGGCATCTATGTCGATGCGACGGCGTCTCGCTTTGGCCGACAAGACCGACAGGCCGACAT
CGACCGAGCCGTGAAGTCGGCCTCGGGCGAGGTCTGTCGGCGAACGTGCGTACACTAGTA
TACCGCCGTCTACTACGAAGAATCGCTTGTGCCACCCTTTTAGCGGCCATTTCCTCTTCT
TGTGCAGGTATCCATTAAAGACATCCGGTCTCTTCTCGAATCGTTGACCGTCTTTTAATC
CTTCGAGCACTTCCCATTCACTGCCTCGTCGACGGCTGCGAAGGTGTCTTCTAGACTTCC
CACTCCTGGGTGGAGCTACCGGCGGCCTCACGATTCTATCGCCACTGTCGGCAGATAGAG
AAGCCGTTTCACCCGAGCAGTCGGAGTCAGATGGAGCCCTGCGTAGGGCCGCCGCTCTGC
CGGCAGCACCGCGTCTGCGGTCCCTTTTGTTCTCGTGTGGTGTTTCGTTGCCATGTTTGC
CTGTCTGACTCATGTCTTTGCCGCTACAAGCGTCCAGTAGCAACCATCTTATGTCGCCTA
TAATAGCGAACGGATCCTTCAATTTCATTATCGCGTGGTTGATAACTAGTACTTGCAATA
TTTGAGCGGTTAAGTTAAATCCACTACACAGCATTAACCACTTGTCTTCGACAAAATGTC
ACTTAGAGTCATTACTACGCCAATTTTGGTTATTTCTCAGTTGAGTAGTTGAATTCACTA
AACAGTATTAACCACTTGTCTTTGTCAAATTTCACTTAGAGTCAATACTACGCCAATTTT
GGTTACTTCCCAGTTGAGTACTTAAGTTGAATTCACTACACAGTTTTATTTAGTCTGTGG
TTGTGAAATGTTACTTATAGGCAACTACAACGCCAATTTTGGTACTAACTAATCACTTAT
TCCCGCAAGGCCAGACTTATCCCTCTTCTGAGACCGGAGCCCAGCAGTGGGCAGTAATGA
GTTGTTACAGTATATAGTAACATTAAATATTTTAATTTCTTAGAAGTGTAATGTTAATTT
AGGTTATAATTATAATTAGATGTAAGTTGCGGACATCTAGTCCTTAGTATAAGTAAAATA
AATATGTTTCACTGTGAA
(3018 bp)

- SilkBase 1999-2023 -