SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26754_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dihydropyrimidine_dehydrogenase_[NADP(+)]_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:15.47 TPM:13.02
ORF EntryO_TrvaMG13995_complete:A_TrvaMG_comp26754_c0_seq1
Sequence
(Nucleotide)
GTCGCGCTGCCAGTGAGCAGTCCACTGCGTCTTTGCACAAATAAATTACGAAAAAAAGTT
TTTTTTTTCTTCTACTTTCAATTCTGTTATTCTTTTTTTTGAAAATGGCCAAGTTATTGA
GCAGAGAGCTGCCGGATATCGAGAATCTCTTGAAGCTGAATCCCGTGGTGAAACCTTACA
CAAACTTAGTACCTTCAGCGCAAACGAAGAAGAATAAACAGCACTGGAAGAGGAACGCTG
ATAGGAAATGTACTGCATGTCCAACCCTGAATAAGAATTTCGATGACATCAAACACACAA
CACTATCTGAACGTGGAGCCTTACGAGAGGCGGCGCGATGCCTCAAATGCGCTGATGCAC
CTTGCCAGAAATCCTGTCCTACTCAGATCGATGTCAAGAGTTTCATTACAAGCATTGGAA
ATAAGAATTACTATGGAGCAGCGAAGGCTATTCTCTCAGACAACCCGCTTGGTCTGACTT
GTGGCATGGTCTGTCCTACCAGCGACCTGTGTGTTGGGGGCTGCAACCTCCACGCTACTG
AGGAGGGAGCTATCAATATTGGAGGATTACAGCATTTTGCCGTTGACATATTTATGAAGA
TGGGCATTCCCCAAACTTTGGACCCGAACACGAAGCCCCTGCCTCAAGGAGGTGATCATA
AAATTGCATTAATTGGCGGAGGACCAGCCAGCATCAGTTGCGCCTGTTTTCTAGCCAGAC
TTGGTTATAAAAACATCACTGTTTACGAAAAGGAAAAATATCTTGGAGGATTAAGTTCCT
CTGAAATCCCTCAATACCGTCTCCCGTACGATGTGGTACAATTCGAAATTGATCTCGTCA
AGAATCTAGGAGTCAAGTTTGTTACCGGGAAGAAACTATCAACAAATGACCTAACTTTGG
AGAATCTTCTATCAGACCACGCGGCTGTATTCCTTGGTATAGGATTACCAGAACCGAAAA
ATGTTCCCATATTCAAAGGCCTCACTCAGGACATGGGATTCTACACCAGTAAGGACTTCT
TGCCTCTGGTGTCGAAAGGCAGTAAGAAAGGTATGTGTGCCTGCAAGTCATCGCTACCAG
AATTATTCGGTAACGTCATAGTCCTGGGGGCCGGTGACACGGCATTCGATTGTGCGACCT
CCGCTTTACGATGTGGGGCGAGACGGGTGTATGTCGTGTTTAGGAAGGGATTCAGCAATA
TTAGAGCTGTGCCTGAAGAGGTGGACTTAGCAAAAGAAGAAAAATGCGAATTTGTGCCTT
TCATGAGTCCACAAGAAGTGATCGTCAAAGATGGAAAAATAACAGGATTAAAGCTGTGTC
GTACGGAACAACTGGACGATGGTGAATGGATTGAAGATCACGACCAAGTCATGCAACTGA
AGGCGAACTTCATTATATCTGCGTTTGGTTCTGGTCTTTATGATAATGACGTAATCCAAG
CGATGTCAGGAGTGAAACTAAATCGCTGGGGTCTACCGAAAGTGAATGAGACGAGCATGC
AGAGCGTGTCAAATCCACGTGTTTTCATCGGAGGAGATCTCGCTGGAGTGGCCGAGACTA
CTGTCGAGTCTGTTAACGATGGGAAAACGGCTGCTTGGTATATGCACTGTTATTTACAGA
ACGTTCCATTCGAATCGCCAATAGAGCTGCCAAAGTTCCACTGTGCTATCGACGACGTGG
ACCTATCAGTGGAGGTATGCGGCATCAAGTTTGAGAATCCCTTCGGTTTGGCGAGTGCCC
CTCCCACCACCAGCTCTGCCATGATCCGTAGGGCTTTCCAGCAGGGTTGGGGATTTGCTG
TCACAAAAACTTTTGGTTTGGATAAGGACATGGTGACAAATGTCTCACCTCGTATCGTCC
GCGGTGTCACTTCAGGAGAGAATTATGGACCAGGACAGGGATCCTTCTTGAATATCGAGT
TAATATCAGAGAAATGTGAAGCTTACTGGTGCCAGAGTATCAGGGAATTGAAGAAGGACT
TCCCTAATAAAGTAATAATAGCATCAATAATGTGTTCATATAACGAAGAAGACTGGGTCG
AACTAGCACAAAAGGCAGAAGCAGCTGGTTCTGATGCTTTAGAACTGAATCTATCTTGTC
CTCACGGTATGGGAGAATCGGGAATGGGGCTCGCTTGTGGACAGGACCCAGTTCTAGTGA
AAGGAATCTCTCAATGGGTACGGAAAGCCATCAAGATCCCATTCTTCGTGAAACTGACAC
CGAATATTACTGATATAGTTGGCATTGCTATGGCCGCTTACGAAGGTGGCGCGAACGGAG
TTTCAGCAATAAACACAGTATCAGGACTAATGTCCGTCAGAGCCGATGCGACGCCATGGC
CTGCTGTCGGAAAAGAAAAACACACAACATACGGTGGAGTGTCAGGTAATGCTACCCGAC
CGATGGGGCTACGAGCAGTTTCCGCTATCGGTAACAAACTGCCAGGCTTCCCTATACTGG
GTATTGGAGGAATTGACTCGGCTGACTCAGCGCTGCAGTTTATAATGTGTGGGGCACCGG
TTGTACAGATCTGCAGTGCAGTACAAAATCAGGACTTCACAGTAGTCGACGATTACATCA
CAGGTCTCAAGGCTCTGTTGTACCTACGTTCTAAAGGATTAAGCGGTTGGACTGGACAAT
CTCCTCCTACGTTCAAACACCAGAAGGGAAAGCCTGTTCAAACTATTTACGGAGATGACG
GAAAGGTTCTAGCACATTTCGGGCCTTACAACAAGAAACGCGAACAGATACTCCACCAAA
ACAGATTACAGTTACATTTGCTGGACGACAATCTTATAGAGAGCCGATACACCAACGGAG
TATCAAACGGCTACCATGAGGTGCCGAGAATCAAAGATGTCCTCGGTCTGGCGTTGCCGA
GAGTCGGGACTTACAAACAACTGGATAATAAGAAACAAGTTGTAGCGCTTATTGATGATG
ACATGTGTATAAATTGTGGAAAATGCTACATGGCGTGTGCAGATTCTGGTTATCAAGCGA
TCGAATTCGATCCAAAGAGTCATCTTCCACATGTGACCGACGATTGTACCGGTTGCACAC
TCTGTCTGTCTGTGTGTCCAATCATAGACTGTATATCAATGGTGCCAAAGAAAATTCCGC
ACAAAATCAAAAGGGGTTTGGGCTTCGAAATTCACGCTATCTCACCATTAGATGCAATAT
GCCAATAAGAAACTAGTAATATTTATAAAAATATATTTGTAAAACATATGTAGAATATAG
GAATAAAAATTAATAGTCTGTCATTAAAAAAAA
(3273 bp)

- SilkBase 1999-2023 -