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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26752_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vesicle-associated_membrane_protein-associated_protein_B/C_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006874 P cellular calcium ion homeostasis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006986 P response to unfolded protein
GO:0006987 P obsolete activation of signaling protein activity involved in unfolded protein response
GO:0007029 P endoplasmic reticulum organization
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019048 P modulation by virus of host process
GO:0019899 F enzyme binding
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0033149 F FFAT motif binding
GO:0042803 F protein homodimerization activity
GO:0044790 P suppression of viral release by host
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044828 P negative regulation by host of viral genome replication
GO:0044829 P positive regulation by host of viral genome replication
GO:0045070 P positive regulation of viral genome replication
GO:0046725 P negative regulation by virus of viral protein levels in host cell
GO:0046982 F protein heterodimerization activity
GO:0048487 F beta-tubulin binding
GO:0090114 P COPII-coated vesicle budding
Transcript
Level		FPKM:1.02 TPM:0.86
ORF EntryO_TrvaMG13977_complete:A_TrvaMG_comp26752_c0_seq4
Sequence
(Nucleotide)
CTACAATATAGCATAATAGTTTAAATATAACAACAATGTCGCCAGAAATGTTAATATTGT
CTATTGTTAAATAAAATAAAACTAATAAGTAGGAACAGACAATGAGCACAGGGTCATTAT
CGTTCATGAAACAATTACAAAAAATTAATAGTCACAAAGCATAAAAATGGAAAAGACATT
TCGATATTCCTAGAATGATTAAAGACGTTATAAATACCGATCGTTCCGCGAGAAAAATTG
CGATATTTACAAAGGAACACGAAATATACAAAGTTTTCCTTCAAAAGTTAAATAGAGATT
ATCACAGGTGATTGATAATTTTAGCGATGAAACGCTTATCGCAATTTCCTAGTTTCACGC
GGAACGAATTAATCTGTGTGGAAACACAGTTATCAGTGAGGGACCAATCTGCACTCCCCC
GCGGTATCAATATTATCTTCAGACATGACGTGAGAATGGTTTTAACAATATATATTAAGT
CAGAGACCAAAGACATTTTACAAATAATCAAACCACCACTTGGAAAGTAAAATTAAAAAT
GCAGTGAAAATTTTCTAAATATATTTATCGTAAACTACTTTAAAATGTGCTATGAAAAAT
GTCGAACAAACCACGCTCAAATTACAATTTTATAACCTTATAACCATAATCCTCACTTAC
ACCACAGTTAGCTGAGCTTTTAAATTAACGAAAATAATATAAATTTCATATCGTTTGCGA
GACTAAACCATTACTTCAGCATGAGATGTATTGTTTAGCTCAGCTAAAGCCAAACCGGTC
GCATAAAATCCTAATGTAATAAGTCAAAAGCGTCTCCTCACTGCCATTTCGTCACTCTCG
GTATATTTAAATTAACTATTGCAACAATAAAGTTTCAAGATCAATATTCCTGTATTAATC
TGTAAAAGTAGAAAATATTTTCTTACAACTCGCAAGATAAAACGATACATTACAAAAATC
TACAATTTCGCTTTTAAAGAGTCGCTAACATTATTAATTTTAATATTAATTTACAATGTT
TCGTTGTAGTTGTACAATATCGCAAACTATATATGTTCCAATATAATTTGTACTTGGAAT
AACAATTTTAGAATATAATTCTTGGAACGATTGCATATGCTGTATCAAATCCGATATACC
TAGTAAATTATAATTATACTTAAAATGGAAGTTGGTTGCAGGCGGTGCATTGTTTATCTA
TTTCAATTTATATGCGGTAAGTATTATAAATTTCAAATATTCGTGAAATAATATTTTAAT
TCTAGTGTAAATATATAATATCGCTATTTTTAATAACGTGGTTAATATAAGAATAATTAT
ACGAATTCCATTAAAAGTATAATTTATTATCTATTTGGTGTTTATAAATTGAACAATTGT
ATTGGAACATCTACATTGAGTTATTGGCTATAGTAAATATCTATGAAACATTAATTCGTG
ATGACATCCTATGGAAAATGTTTTTCAAAAAGGTTATTTGTACCAAAAGTTATTCAAAGG
CCTTTTCAATAGAGCCACGTTTTGTAATTTTCATAAATACAGCACATATTACTAAAAAAT
ATCACTTTTAGAATAAATGACAGGTAGAGATAATATTATAATACTTTATTAATAAAATGA
GTTTTATAAATTTAGAAATGTATATAACAGGGCCTAAAATTTAGTCAAAAAACATTCAAA
TAACGTACGTCAATTATATTACTAATTTAATTAATAAAAGCGTTTTATAAATAACTTTTA
TATATAAAAATGCGATAACGCCATGGAATTTAATGTTTCAAAGATTAAAAATAGTTCTAA
TCTAGTCTCTGTTTAGTTACTGCTCAGGCACCCGTTAGCTAATACACAATTTAGTGAATA
CTGTTTCTACAATATTTCCAATCTAACGAAGCTTAATTTATGTTTTCACACTTAATATTA
TATTTTAAGTATATTATTTTTATTCTTTATTATCGCATCACCAAGTGGTTGTCCCTAGGC
ACTAAAGACATGTATTGCTTTACCAATAGTGAGAATAATTTTGTCCCTAAATGCATCAAA
TTCCTTACGTGTTCTCTAAGGTAATCTGATCAACACATTTACTCTCTTTGTCAAAAGGCG
CATAAATTAAAAATAAATGGTCTCCAAGTTAATTTAAAAAAAATACCCCCCAGTTATAAG
AGAACGATAAATATATACTTTTTGAAATTATATTATTGTTTTACACTTGTCATAGGAAAT
AAGATCCATCATAATCAGTCATAACAAATACAATCAGAGGAATACTTTCTTAGTTCTGTG
AACGGTGAACTCACACTGCATTAGACACCTCAGAAACGAAAGTTATTCTTTGTTTTATAT
TATACCCAGAACCGGCTGGAGTTATGTGAATATTTCTGATTTCCTTCGTCGAGTCGTGCA
TTTCTTTCCAATTATAAAGTATTTTGAATTGTTGACTCATTTCGAGAAATAAAACGATCC
GTTTTATTTCTCGAAATATCCATGTAAAAATACTTATTGTTTGGAAATGGCCACCACCAG
ATTTTCTATATCATTAAATTTATTCATGTTAGAACCACTTAGTCATGATATTTTGTTAAT
AGTTCTAAGTATTAAGGTCAGTTTAGTTACATTCTTCAAAACTGTCTACATTGCGTTTGT
CTATTTAATATTATGTTTACATATATCATTTATTATAGTAATAATGTTAATATAATGACT
ATATTAGTGCTGGAAGGTGATGGGTGTAACAATAATAATAGAATGTATAGTCTATAACAA
CATAAATAACAAAAAATATAATAATTATGCAATGATACAATTGTGATAATGCGATACAGA
CTTTCCTATGTAAATTTGTATTATAAATTCCAAAGACGCATTTAAGAGAACGAAGGTACA
CACTTTTATTTAATAAATTTTAAGTAAGAAAATTTACCGACACTTTACAATAAGCTGATT
CTAGATATCTATTCACACTAATAAAATTGTAATACTAATCCCGTGCGCTACAGCGATGAT
GATACCTAACGATTCCGAAATAATCATAATCACTTCACATCTCAAATATTTAATTCTGAT
GAACACTCTTATGACAATTTACATTAAGCATAATCCAGAGGAAAAATCTATTCAGACATT
TTAATTTTGAGTAAGAATTGAGGAAAAGCTAGCTAGTCAGAAAGCAGAAAAATTATATTC
TTTTGAATTTTAAACAATAATATAAAGGGTGTAAGCTACATGTAGATCGGTCGATCGATC
ACTACTAAGTAATATTTTATATTCAGAAAAAGACGAAGATAAAGCAATGACAAAAGTTTT
GTCAAGTTAAAAAAAAAGTTACTTGAAATTTCTTGAAAATAGTTATTATGCTCACTTGTT
CGCTTACGTTTGTAATTTTGCTCTTGTCTTGTCGCACAACGTAATAAATCAATATGAAAA
TAACAAATAAGAAAAATAAATAAATTAGATACTGTAACAATTATTATTAGGAAAGAAGAA
GGAAACTTTGTTAATTCTGTTAATAATTAAAGCAGTTACAATTTATATGCATATTTTTAA
GTTACTCTGGTTTATTTTATAAAATAGGAATTAAGGGTCACCATGTATATTATAGAACCA
TCGAATTTAAACGATGGATCATAATAATATCTAAGTTATTATTGCAGAGTGATCTTTCAT
AATGTAGCTAGCTCATCAAAAATTTTTACACATTCCGGAAATTTCAGATCATTTTCAATG
TAAGACTTATTTTTTTTGATTCTTTAAAGATTGGTATGAGATTTATTACACAACAATTAC
AATTTTCTTATCAGTCCGAATGATATCCTCTAAATTAAGCTGATACAGCAGGTAATTAAG
CGAAAAAAACAGCATCACAGGTTTTATGTATAATGAAATGTATCCGAACCGTGAGCTTGT
ACAAACTATTGACCGAAAACTAAGCTAACTCACAAGAGAGATGCATCGGGAGTGTCGTTA
ACAGCGGTACTGAGGTGTTACAGAGTCACCGCGGGGCCCCGGGCCAGCTCACATCAGAAA
CTTGCCGATTATGATGCCAATGAGGGCCATGCACACGGCGGTGATGATCCACGGCATTAT
TGCAACTTGCGCTGACTTCTCGGGCCCGAACGAGTGTGGGCGAGACACGCGACCATCGCC
GGCAGACTGACGCAAACGCAGAAGCTCCTCCTTGGCAGCAGGCTTCGCGTCATCCGCTAC
GGCGACTCGTTTCTTTGACACTTCGTTCTGGGCGGCGTTATCGCCGGCATCATTGAGATT
GGTTCCACGAGGAGTTTCAAAGACGCATTTTAATTTGTAATCCATCAGCTGCTCTGGGTT
TATCTCTTTCCACACTAGATCAATGTTGGTGTTTCCTTCAGGAGCAACTACACTTTGGAC
CATAAACTTATGTTTGTGGTTTTCATTTGGATCCAAATATACAGGCTGCGGAGTAATTGC
AATTTCCTGTCTAGAGTTTGGCCCAAGAGCTCCAGAGTTAGGACGTACGCAATATTTCTT
GGGTGCTGTTGTTTTGATCTTAAATAGCACTGTATCGTTTGTAGGATTTGTGAGCCTCAT
GTAGGTAGTACAACCTTGCTCAAAGAGTCCTGCATAATTAACTTTAAATTTTAGTTCATT
TTGTGGTTCGATAGTTAGCACTTGGTTAGGCATTTTACGGTACTATAGCACAATATCTCG
ATGGCAAAAATTAACAGACTGAGAAAATAGTTCTCTCCGCGATGTCTGCCAAAGCGAGCG
AACAAGAAATTGAAGAACGACGAAATGACGAATAGACAATAGAATGGACATGCGCAATGG
GTATAGG
(4807 bp)

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