SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26733_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_translation_initiation_factor_IF-2,_mitochondrial_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0032790 P ribosome disassembly
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
Transcript
Level		FPKM:1.14 TPM:0.96
ORF EntryO_TrvaMG13848_complete:A_TrvaMG_comp26733_c0_seq1
Sequence
(Nucleotide)
TTGAACCTAAACCCTGATATCTTGATTATATCTCTTACTACTTGAGGGTTGTGAAAGAGG
AAGAGAACAAGGACGCGGTCCCCGCTCCCCCCGCCCCTCCCGAGCGACTCCGCCCGCGGC
CCCCCGTCGTCTGCGTCATGGGACACGTGGACCACGGGAAGACCACCTTACTGGACGCGC
TCCGGGACACCGCTGTCGTGGACACGGAGTTTGGGGGCATCACGCAACATATAGGGGCTT
TTGAAGTGAAACTAAGCAGTGGTGAGACGGTAACATTTCTGGACACCCCGGGACACGCCG
CCTTCAGCGCCATGCGTGGTCGCGGCGCGCGAGCCACTGACATCGTGGTGCTGGTCGTGG
CCGCCGACGACGGCGTCATGGAACAAACCGTGCAGTCCATCAGGATGGCCAGGGAGGCTG
GAGTTCCTATATTGGTGGCGATCAACAAAATCGACAAACCAGGTGTGAACATTGAGCGAG
TGTTGCGCGCCCTTGCCCAGCATGGCGTCGTGTGCGAGCAGCAGGGCGGCGACGTGCAGG
CCATACCCGTCTCCGCGCTCAAACGACACAACCTGGACACGCTGGTCGAGGCGATCACAC
TGCAGGCACAACTCATGGAGCTGACGGCAGAGGAGGGGGGGTATGTGGAGGGAGTGGTGC
TAGAGGCGCTGGTGGACCCCAAGCTAGGCAAACAAGCAACAGTATTAGTTCAGAGAGGAA
CACTGCGTAAAGGGTCCATCATTGTAGCGGGGAATGGCTGGGCTAAGGTACGGACGTTAC
GGGCCGCGGACGGCCTGCCGCTGCAGAGCGCGCCCCCCTCCTGTCCCGCCGCCGTGTCGG
GCTGGAGGGAGATGCCCTCCGCCGGGGACCAGGTGCTGGAGGTACCCACTGAGAAAAGAG
CCAACGAAGTAATGAAGTGGCGCGCCGCACAACGCATGAAGGAGAAGCAGGAGTCGGACT
ACTCCGCCATTGAAGCCAAGATGTCCTCCCACCAGCAGCAGTACCGCCTCGCGCTCGCCA
GGAAGCGCGCCATGGGACGGTACCGCCTCAAGCCGGACGGACCCAGGGACAAGATGATCA
AGGAGGACACGCATCCCACGCTCAATGTCATCGTCAAAGGTAACGTAGGGGCCAGGGTGG
ACATGCAGCAGAAAGCTTCGAAAAGTTGTGAGCGTAAATTTTATAAACAACAAGTTAGAA
TTTAAATCCATCTCCGAGTTTCTAGGCCTTTATTTTTAGCTCATTATCGCACACCGTCGA
ACAAAGTCGTAGTTATGAATATAATTGTTTATATTGTCAGGTGACGTGGACGGTTCTGTG
GAGGCCATATTGGATATCCTGGAGACGTACGACGACCACGACCGCGTCCGACTCGACCTC
GTGCACTACGGGGTCGGACAGGTCACTCCTAACGATGTGGAGATAGCAGAGACATTCAAC
GCTATAATATACGCGTTCAACGTGGACATACCTCCGGCCGTGGCGAGCGACGCCAAGAAA
CTGAAGCTAACAGTCAAAGAACACAACGTTATATACAGACTAGTTGATGACGTCAAACAG
GAGATATCGGCGCGGATACCGACCAGGCAGGAGGAGGAGATACTAGGTGAAGCGAATGTA
CTCCAAGAGTTCCTTGTATCGGATGGCAAGAAGAAAGTTCCTGTGGCGGGGTGTCGCTGT
GTTAAAGGAAGTCTCAGTAAAAACGCACTATACAGGGTGATACGAGCAGGAGAAGTTATA
TTTGAAGGTAAACTATCATCAATGAAACATTTAAAAGATGAAGTGCCGACTATCAAACGC
GACATGGAGTGCGGCCTCAAGTTCGACGACCCCGCGTGTCGGGTGCAGCCGGGGGACACG
GTAGTATGTTACAAAATGATTGACGTCAACGACGAAACAGACTGGGACCCCGGGTTTTAA
ATAATATATTTGTTAAATGTTGAAAAAAAAA
(1951 bp)

- SilkBase 1999-2023 -