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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26729_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:5.16 TPM:4.35
ORF EntryO_TrvaMG13827_complete:A_TrvaMG_comp26729_c0_seq2
Sequence
(Nucleotide)
TTTACTTTTTATTATTTTAAGACATAGACCATATTGTGTTCAATTTGTCGGTCTAGGCTG
AACTATTGAAATGTTTTAGGATAAAGGCATAGTATTGCAATACCTGAATATAATCAAAAT
ATTAACAACATCGACAAATTTGAAATATGTATGAAAACTAATTAAATTCATGTTTGCGTT
AGCGTCTAGTTACTTTAGAGTTCTCTGTCAGTCTAATGTGTTTTGAATTTTTTTAGTGCA
ATTAGACAAACTTAATCATGAGTGGATAACCTATTTTTAGCGTAAAAAAATAGGTTATCC
ACTTCGACTTGGAACTAAAAAAAGTTTGACGTCTATTTACTAGCCCCTATAAATGACATT
TAATAAAAAGTAAATATCAACTTCATGCATAATTAACGATGTCACTCTCAATAAACTGAC
TTCGACATTACTAATGAAATATTATTTTTTTAAAATTCCATTTCTCATATTACTCACACT
GATGTTCGTTCCCGGCCGGATATCCGTACTGTCCGTATCCGGGGTACATCCCTCCCTGAT
ACATGTTGTACTGCGCGTACTGCGAGGGGGGCGTGGCCTCGTCGCCGCCCATGTCTGAAG
GGGGCATCGACTGCGGCGGCTGGGGAGGAGGCTGTTGTTGTTGTTGCTTTATTTTGATCT
GCGCCTCGATAGCCTCGGCCTCCTTGACCTTCCCTATGCTGCGGTAGTACTCGGCCCACT
GCACGCTGTAGTCCTGCGAGGGTTGAGGCGTGGACGGACCGCCGCTGTCGTTTCCACCTA
GAGACTGATTGCTCGTCTCGTCTTGTTGTTGCTGTTGCTGTTGTTGCTGCTGTTGTATCT
TAGCTTGTTCGATAGCCTCCGCTTCCCGAACTAATCCGACCGAGCGGTAGTAATCGATCC
ATTGTTGAGAGTAATCGAGCTGGCCCGTTGCGGGATTCACTGATACTTGTTGCTGTGGTC
CCCCTTGCGAGGGGTTCTGTTGATGCCAGTGCGGGTTGTACCCCCAGGCGGCGGGCGCGC
CTCCCCCTCCTCCCCCTCCCCCGTAGTACTCGGGGCCGGGGGTGCCACCGCCGCTACCGT
CGCCGCCATTACCGTTACCATTGCCATTACCGTTGCCTTCAGGGATGAAGTTTATTGGCC
CTCCAACTTTCTCCATGACAATTCTCTTGCAGGCTTCAACTGCTTCGGGATGTCCTCGTA
TAACGAAGGTCCGTGTATTCCTGTCGTTGTTCTGACACCTCCTGTCCAGTTCGCAATGTG
CACCGGACTGAGCGTTGATCTGTTTTATTATTTCACCTCCTCTCCCAATAACGAGTCCGC
ACTTAGGTCCGTGTATGGTGAAGGTGCACCTCACTTCCGGTCTGTCCGGCCACTGCTGCC
CGTACTCCATGCCTCGGTCCCCGTTCTGAGGCCCGGCGCCGCGGACGGGACGCGTCCGAC
TCTCCTCTTCGCATCTCTTGACACTAGATATGAGGTCTTCAATCATCTGCCTAGCCTGGT
CGAGTTGGTGCGGCTTCCCCTGAAGGTAACAGAGTTTGTCTCCAGGTTCCTCGTCATGTT
CCTGGTTGAACTGCACCCGGCAGCCGCTGTCCGCCTGGATCTTCTTGATCATTTTACCTT
TGTGGCCGATCACGACGCCTATCGCCACTTTTGGTACTAGAACCTCAGCTGACGTAGTAG
CATGTCCATTGCCCGGGTCGGAGCCGCCGTACCCGTCATCGTAGGACCGCGGTGGTTCCT
GCATATCCTTGTTGGCGAGTAACTCGAACACCAGTTGTTTAGCGTGCTCTACTTTGGCCG
GATCGCCCGATATACGTAACGGTTTCTCTCTTATCGCAGTCTCGTTGGGTCCGTCTTGTA
TGACCACCATCTTGGCTCCAGTTTGTTCTTGTAACTGTTTTATTGTCTTTCCGTTTTTGC
CGATAATTAAACCGACTTTAGCTCCTGGTATCATGATTTCCTCCATCATGTTGGGTCCAC
CAGGTCTTCCCATATTCATTCCTGATTCCTGATCTTGGTGCTGTGGCGCATTCTCCCGTC
CACGGTGATTCACGATTTGATTAACTAATTCCTTAGCCCTCTGTATTGCGTCTCTCGTTC
CGGTGAGGGTGCAAAGTCTGTCCGGGTTACCGTCTGAAGGCGGGGCCATTTGTATTTTAC
ATCCTGATTCAGCTTGCAGCCTTGTGATCTGTTCACCGCCACGTCCAATAATCAATCCGA
CCATACGATCGGGCACTCTTATGTATTCATTGATGCTCTGATCGGGCAACAGATTGGTGG
GTCCGCTGCCGGGGCCCGCGCCCGCGATCATTCGACCACCGGGCACTGGACCGGGGGGAG
ACACGCTGTCCACGAAATTCATAACTGGAGGTTGTGGTGTAAAAACAGGCTCAACAGGAG
CTAATTTCTTTGGTGTTGGTTCAGGTCCGTCTTCCAAAGGCCTCTTGGAACTACCAATTT
TAGCAGCAACCTCTCTCGCACGTTGTACAGCAGTCGCATATCCCGGCGTTTGACTATTAT
TTTGGAGCGTAGCCATAGAAGAATAATCACTCATATTTGGAATAAACTGCACTTTCAACC
GCGTTTATACGCAGCCATGAACAAAAAAAAGGTCAAAAAGACCTAAAATTATAAATTTTA
CTCGCAAATTTGCGAGCCTCAAAGAGAGACGCG
(2673 bp)

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