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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26729_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:10.37 TPM:8.73
ORF EntryO_TrvaMG13825_complete:A_TrvaMG_comp26729_c0_seq1
Sequence
(Nucleotide)
ATAAATGTAGATAACAAATAGATACAAAATAAAAATTATAAGTAAACATGATGAATATAA
TGGGAAAGTTCAAAATAAAATTTTGAAGCGACTAAAATGTTTTATTCAGTTTCGTCCAGC
GAGGTTTACTAAAATTAAGTTTTTGATCTAAATAGAAGCAACACTTTTATCGAAAAAGGA
CCAACCTCAGGTGGGATATATTTTCATCTACCTTCATTGAACTAACTAGGAAGGCCGAGC
CTAATATCTAAACCATAATATCTAGTAATAAAAACATAAACGGTTGTTTCCATTTTTTTT
TCTTTTTTTAATCCAGAGATTTGGTTGCTATGAGCGAAGATATTATTAAACTACTTTTGG
TACATGTTTTTGCACTTAACAACACTGAAAATAGTTTTCCTATCGTCTTAATGCCTGTTT
ACGTTTTCCAAAAGTTATGTTTCAGTAATTACTATTTATTTGGAAACAGACTGCAAGTTT
TCGTCTCCTAAAATAAAGTTTATTTTAATACGAAAATAGCGTCACTGTATATCAAAATAC
TACCTAATTATGCCTACATTCGATGAAATAGGATTTCGATGTCAATTTACGAGTATAAAA
AGAACCAAATTCTCGCTGGACCCTAACACAATTTTGTTTAAAAGGATCACTTTCAAACTG
TTAGACAAATTGTTATACGCTAAAGTTTTTCTCAATTTTATGTTAATAATAGACCAAATC
GTAGTTCAAAAGTGACCCTGAGCACAGATTTCAGTTATCATCAGACTTACCCGGCTGTTA
TACCACTGTTCAGTACTTCTTATATTGTTTTGGCGCCATTTTGTTTAGCTCTAGCCACCA
TTTTAGTTTCGATAAGTCCACCATTTCGTGTTTCCAATTCCACAGCAGTCAATCATATAT
TTTAATGTCTGTTATTTAGGGAATGACTGTCTTGTACCTTTAAAAAGATCGACAATGGAC
ATTCATATAAAAATAGACATGTTATAATATGAAATAGGCACAGTACAATAGTACACAGTA
TAAAAAATCACACAGAAAAAAACAGATAATCAATAGAGACAATGCATGTCGATATTCTGT
TGATGTCCGTTGTGAGTTGAACCGCCGCTGGTTCTTGATTGCTGTGGAGGGCACACGACA
CGAATAATAAAGCATTGGAAAACACTACGGACACGTGAAATGGTGCTACTTATAGGCTAT
AGACAAACATGGTACAATCATAAAGAATCAGTCAATCGACACGTCAGTTTATCCTATCAG
ACCGAGTGTAAAACATTTACAGGGCATCTTACCTGTTCGAGCTGTGAAGAGAATAATAAT
TAAAATAAAATGAACACACAAGTCAATCAACATACACTTTATATCTTAAGAAATTAATAC
AAGACTCGGGCAAGCGATTGGAACCTCGAGCGTGAAATTGCGAAGTAATCTTTACCGATA
ATTGAACAATTTCAAAACAGGAATGTAGATCGTTTACATTACCTTTCATTTGTAGTCTAT
ACACTAAGAATTACATTATCAATAACATTTCAATACATGTTCAAATCTGTCATTTTATCA
TCTAATGAGCTATCAAGAGAGATATCTGCGTAAATATAAAATCTAACCCTACGCTTACAT
CTACATAGAGTTCTGGAGTTCTCTTAACGATAGATTCAAAAATATAACGTTTTTCATATA
TAGATTTGATTATAATTGTAACAATAGTAGTGCTAAGTGACCGATACGACTATCATTACC
TCGGCTCCTTGGCGAAGCTTCTGTTTGCGTATCTCTCTCTAGGCCGGTGGTTCGCCGCGA
GTTGCGTTTACTAAAGGCAGTGTGGCTATATTATAAACCTGTACAGACTGCACAACATAC
ATCAATATTGGCACCAAAAATTATACACACAATTTCAAAACGATACATAATGAGATTTTA
TAAAAAAATAAACCACACAGCCATCACGTATTGGTCATAGATAATTTAAACAATGTATTG
ATTGTAGTAGAAGATCCACAACAAATAAATGCTGCGTTAAGTGAGACGCGATGACCCGTC
AATATTAATACTACGGTCAGATTAAAACGATCCTCCTACACTAAAACTATCATTACGTAA
TTATTAATCTCTTATCTAAACACGCATATAAAGCATTAATTAAAAAATTGTTAATTTATT
TCTTGTGGATTTGACTATCATTGAAACTGTGAAGAAAATGTTGAAACTTTTACACTTAAT
TATTTAATTATATACTAAAAGATGCGTCGCGTGACACCCGTGGCGCGATCCCGTTCGGTT
TACTGATGTTCGTTCCCGGCCGGATATCCGTACTGTCCGTATCCGGGGTACATCCCTCCC
TGATACATGTTGTACTGCGCGTACTGCGAGGGGGGCGTGGCCTCGTCGCCGCCCATGTCT
GAAGGGGGCATCGACTGCGGCGGCTGGGGAGGAGGCTGTTGTTGTTGTTGCTTTATTTTG
ATCTGCGCCTCGATAGCCTCGGCCTCCTTGACCTTCCCTATGCTGCGGTAGTACTCGGCC
CACTGCACGCTGTAGTCCTGCGAGGGTTGAGGCGTGGACGGACCGCCGCTGTCGTTTCCA
CCTAGAGACTGATTGCTCGTCTCGTCTTGTTGTTGCTGTTGCTGTTGTTGCTGCTGTTGT
ATCTTAGCTTGTTCGATAGCCTCCGCTTCCCGAACTAATCCGACCGAGCGGTAGTAATCG
ATCCATTGTTGAGAGTAATCGAGCTGGCCCGTTGCGGGATTCACTGATACTTGTTGCTGT
GGTCCCCCTTGCGAGGGGTTCTGTTGATGCCAGTGCGGGTTGTACCCCCAGGCGGCGGGC
GCGCCTCCCCCTCCTCCCCCTCCCCCGTAGTACTCGGGGCCGGGGGTGCCACCGCCGCTA
CCGTCGCCGCCATTACCGTTACCATTGCCATTACCGTTGCCTTCAGGGATGAAGTTTATT
GGCCCTCCAACTTTCTCCATGACAATTCTCTTGCAGGCTTCAACTGCTTCGGGATGTCCT
CGTATAACGAAGGTCCGTGTATTCCTGTCGTTGTTCTGACACCTCCTGTCCAGTTCGCAA
TGTGCACCGGACTGAGCGTTGATCTGTTTTATTATTTCACCTCCTCTCCCAATAACGAGT
CCGCACTTAGGTCCGTGTATGGTGAAGGTGCACCTCACTTCCGGTCTGTCCGGCCACTGC
TGCCCGTACTCCATGCCTCGGTCCCCGTTCTGAGGCCCGGCGCCGCGGACGGGACGCGTC
CGACTCTCCTCTTCGCATCTCTTGACACTAGATATGAGGTCTTCAATCATCTGCCTAGCC
TGGTCGAGTTGGTGCGGCTTCCCCTGAAGGTAACAGAGTTTGTCTCCAGGTTCCTCGTCA
TGTTCCTGGTTGAACTGCACCCGGCAGCCGCTGTCCGCCTGGATCTTCTTGATCATTTTA
CCTTTGTGGCCGATCACGACGCCTATCGCCACTTTTGGTACTAGAACCTCAGCTGACGTA
GTAGCATGTCCATTGCCCGGGTCGGAGCCGCCGTACCCGTCATCGTAGGACCGCGGTGGT
TCCTGCATATCCTTGTTGGCGAGTAACTCGAACACCAGTTGTTTAGCGTGCTCTACTTTG
GCCGGATCGCCCGATATACGTAACGGTTTCTCTCTTATCGCAGTCTCGTTGGGTCCGTCT
TGTATGACCACCATCTTGGCTCCAGTTTGTTCTTGTAACTGTTTTATTGTCTTTCCGTTT
TTGCCGATAATTAAACCGACTTTAGCTCCTGGTATCATGATTTCCTCCATCATGTTGGGT
CCACCAGGTCTTCCCATATTCATTCCTGATTCCTGATCTTGGTGCTGTGGCGCATTCTCC
CGTCCACGGTGATTCACGATTTGATTAACTAATTCCTTAGCCCTCTGTATTGCGTCTCTC
GTTCCGGTGAGGGTGCAAAGTCTGTCCGGGTTACCGTCTGAAGGCGGGGCCATTTGTATT
TTACATCCTGATTCAGCTTGCAGCCTTGTGATCTGTTCACCGCCACGTCCAATAATCAAT
CCGACCATACGATCGGGCACTCTTATGTATTCATTGATGCTCTGATCGGGCAACAGATTG
GTGGGTCCGCTGCCGGGGCCCGCGCCCGCGATCATTCGACCACCGGGCACTGGACCGGGG
GGAGACACGCTGTCCACGAAATTCATAACTGGAGGTTGTGGTGTAAAAACAGGCTCAACA
GGAGCTAATTTCTTTGGTGTTGGTTCAGGTCCGTCTTCCAAAGGCCTCTTGGAACTACCA
ATTTTAGCAGCAACCTCTCTCGCACGTTGTACAGCAGTCGCATATCCCGGCGTTTGACTA
TTATTTTGGAGCGTAGCCATAGAAGAATAATCACTCATATTTGGAATAAACTGCACTTTC
AACCGCGTTTATACGCAGCCATGAACAAAAAAAAGGTCAAAAAGACCTAAAATTATAAAT
TTTACTCGCAAATTTGCGAGCCTCAAAGAGAGACGCG
(4477 bp)

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